Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01577 ATGAATCTGCTCTCTCTTTGTTGGAAGCCTTTTGGGCATCCTACTGATAATTTCACCTCTGTTGGTGTTATTGGAACCAATTGTGGTGCCAAAGACACCAAAGACACCTTACTTTGGTTCTATGATTATGGTCATTATGCTTCCGGTGACTTCTCCATGGCTGTTGTTCAAGCCAACCAAGTCCTTGAAGACCAGAGCCAAATTGAATCTGGCCCTTTTGGTACTTTCCTCGGTATTTACGATGGTCATGGCGGTCCTGACGCTGCTCGTTATGTTTGTGATAACTTGTTTAGACGTTTCCAAGAAGAACATCAGGGAGTTGTGACTCGTGAAACCATTCTGAACGCTTTTCGTCGAACAGAAGAAGGGTTCACGGCTGTCGTGTCAGAGTTATGGAGTACTCGACCCCAGATAGCAACTGTTGGGACGTGCTGTCTAGTAGGGGTTATACACGAGCAGACACTCTACATTGCAAGCCTGGGGGATTCTCGTGCTGTGTTAGGGAAGAAAGTTGGCAACACTGGTGAGATTGCTGCCATTCAGTTATCAACTGAGCATAATGCAAATCTTGAGGAAATCAGGCAAGAGTTAAGCGAGATGCATCCAAATGACCCTCAAATTGTGGTCCAAAGACATGGAGTTTGGAGAGTGAAAGGAATTATACAGGTTTCTAGATCCATTGGGGATGTCTATTTGAAGCATGCTCAGTATAATAATGAAAGAATCAATGCTAAATTTAGGCTTCCTGAGCCAATTGATATGCCTATATTGACTGCTGTACCTACGATTATTGCTCACCCTCTTCATCAAAACGATTCTTTTCTCATATTTGCATCTGATGGACTTTGGGAACACCTAACCAATGAAAAAGCAGTGGATATTGTTCATAATCATCCACGTGCAGGAAGTGCAAAAAGGCTTGTGAAGGCAGCCCTTCAAGAAGCAGCTCGAAAACGAGAGATGCGGTATTCAGATCTCCGAAAGATCGACAAGAAAGTTCGGCGTCATTTTCACGATGACATTAGTGTTATCGTTTTATTTTTCAACCACGATCTTATATCCAGAAACAATGTCCTCCTAGATCAACCATTATCA 1095 43.01 MNLLSLCWKPFGHPTDNFTSVGVIGTNCGAKDTKDTLLWFYDYGHYASGDFSMAVVQANQVLEDQSQIESGPFGTFLGIYDGHGGPDAARYVCDNLFRRFQEEHQGVVTRETILNAFRRTEEGFTAVVSELWSTRPQIATVGTCCLVGVIHEQTLYIASLGDSRAVLGKKVGNTGEIAAIQLSTEHNANLEEIRQELSEMHPNDPQIVVQRHGVWRVKGIIQVSRSIGDVYLKHAQYNNERINAKFRLPEPIDMPILTAVPTIIAHPLHQNDSFLIFASDGLWEHLTNEKAVDIVHNHPRAGSAKRLVKAALQEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFFNHDLISRNNVLLDQPLS 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 22324863 22328080 + Chy11G201570.1 Chy11g01577 237338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01577 365 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Chy11g01577 365 CDD PP2Cc 51 348 IPR001932 -
Chy11g01577 365 Pfam Protein phosphatase 2C 75 318 IPR001932 -
Chy11g01577 365 SMART PP2C_4 42 346 IPR001932 -
Chy11g01577 365 ProSiteProfiles PPM-type phosphatase domain profile. 50 348 IPR001932 -
Chy11g01577 365 Gene3D - 43 358 IPR036457 -
Chy11g01577 365 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 1 363 - -
Chy11g01577 365 PANTHER ALPHABET, ISOFORM E-RELATED 1 363 - -
Chy11g01577 365 SUPERFAMILY PP2C-like 59 349 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01577 Chy-Chr11:22324863 Chy06g00699 Chy-Chr6:4771728 2.42E-36 dispersed
Chy11g01577 Chy-Chr11:22324863 Chy11g00244 Chy-Chr11:2291313 6.01E-157 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01577 K01102 - csv:101207284 739.184