Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01580 ATGAGACGTGCCCCCATGCCATTTGGCTATGACTATGGCTCCATAAAACACGAGTCACATGTTCTATCTATTTCTCTTAATTTCTACAAGGAAGTCCCCTCAAGATCGGATCGGTGCGTCTTGATGGCGTCATCTGTTCTTTCGAACTCCGATCGTGCACGGGAGTCTTCTTCGAGGAAGCAAAAGAAGAAGAAAAGCCATGGCAATAGAGATCATCATCAAAACCAGAATCATCATATTAAATGGAAATCTCAAGCTCAACAGGAAATTTACTCATCCAAGCTAGTACGAGCATTGAATCAAGTCAGACTCAGTCCTTCAAACGAGGCGCCGCCACGTCGCGGCAGAGCTGTACGTGAAGCCGCCGATAGAGTCCTTGCCGTTGCCGCCAAGGGGAGAACTAGATGGAGTCGAGCCATATTAACGAACAGGTTGAAGCTCAAGTTCAGGAAGGCGCCAAAGAGACAGAGATCAACATCCACCGCTGGAAACAACCGCTCAAAGAAACCTAGAGTCAGCGTATTGCGGTTGAGAGGGAAATCCTTGCCGGCAGTACAAAGGAAAGTTAGGGTCCTTGGTCGGCTGGTTCCCGGTTGCCGGAAAGAACCATTGCCGGTTATTCTGGAAGAAGCTACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCCATGAGTGCCCTTGCTGAGTTGCTCTCGGCTTCAACTTCTGCTGCAGGCTCTAGTTCATCTCCTCCGAGCTGA 744 49.06 MRRAPMPFGYDYGSIKHESHVLSISLNFYKEVPSRSDRCVLMASSVLSNSDRARESSSRKQKKKKSHGNRDHHQNQNHHIKWKSQAQQEIYSSKLVRALNQVRLSPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPKRQRSTSTAGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMSALAELLSASTSAAGSSSSPPS* 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 22358682 22359953 + Chy11G201600.1 Chy11g01580 237341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01580 247 MobiDBLite consensus disorder prediction 58 79 - -
Chy11g01580 247 CDD bHLH_AtIBH1_like 174 229 IPR044549 GO:0006355
Chy11g01580 247 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 57 246 IPR044660 GO:0006355
Chy11g01580 247 MobiDBLite consensus disorder prediction 150 171 - -
Chy11g01580 247 MobiDBLite consensus disorder prediction 48 86 - -
Chy11g01580 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 236 IPR036638 GO:0046983
Chy11g01580 247 PANTHER TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 57 246 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy05g01030 Chy-Chr5:14905973 Chy11g01580 Chy-Chr11:22358682 2.57E-43 transposed
Chy08g01110 Chy-Chr8:18230975 Chy11g01580 Chy-Chr11:22358682 2.26E-47 transposed
Chy11g01580 Chy-Chr11:22358682 Chy06g00764 Chy-Chr6:5263982 3.59E-74 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01580 - - csv:101220618 338.961