Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01602 | ATGGTAGCCGAAGCTGAGATCAAATGCCCTAAATCCCTTCCTCTTATGAAAATCAACTACCATCTTCGTGTTGCCGATGATCGCGATCTTCAGACTGATTTGCCGCACCCTTCTTCCTCACCTGTCTTTTCCCAGGCAGTTAATTGTTCGGATATCGTTGAAGATGTGCATATAAAATCAGCTTCCATAGATTTTGTTCCAAACATTCGGTCTGGTAGCTATGCAGACATTGGAGCTCGGGATTCTATGGATGATGAACATGTCTGCATAGATGACCTGTCTGCCCATCTCCGATCTATGTTCAAATGTTCTATGCCGAAAGGTTTCTATGCCGTGTTTGATGGTCACGGAGGGCCTCATGCAGCTGCTTTTGTCAAGAGGAATGTCTTGAGACTATTCTTTGAAGATGCCGATTGGTTAAAAATGCAGGACATTGATTCTATTTCCCTGAAAGATTTGGAGAACTCTCATCGCAGAGCATTCCAACTGGCAGATCTTGCCTTGGCTGAAGAGCAAAGTGTTAGCAGCTCGTGTGGGACAACTGCATTGACGGCATTGGTTCTTGGGAGGCATTTGCTTGTTGCAAATGCTGGTGACTGCCGAGCAGTCCTATGTAGGAAAGGTATAGCAGTCCCAATGTCTGAAGATCACAGACCTTCTAATTTACTCGAGCTCAAGCGAGTGGAAGGAATGGGCGGGTTTGTAGATGACGGGTATGTTAATGGCTATATTTCAGTAACCAGGACCTTAGGGGATTGGGACTTGAAATTGCCAAATGTCTCCTCATCACCTCTCATTGCTGAGCCACAAGTGGAGCATGTTATATTAACAAACGACGACGAGTTCTTGATTCTCGGATGTGATGGGATATGGGACGTTATGTCGAGCCAATATGCTGTAAGTCTCGTTCGACGAGGGTTGAGGAAGCACAACGATCCTCATCAAAGTTCCCAAGAATTAGTCCAGGAAGCTTTGCGCCTCAACACATCGGATAATCTTACTGCAATCGTTATCTGCTTTTCTTCTTCCAGCTGTGCTCCTCAGCCGCGAATATGCAAGTCGTGTAATCTGACAGAAGATGCTACAAATAGATTGAGGAGCTTGTTAGAAGGTAACTGA | 1119 | 45.31 | MVAEAEIKCPKSLPLMKINYHLRVADDRDLQTDLPHPSSSPVFSQAVNCSDIVEDVHIKSASIDFVPNIRSGSYADIGARDSMDDEHVCIDDLSAHLRSMFKCSMPKGFYAVFDGHGGPHAAAFVKRNVLRLFFEDADWLKMQDIDSISLKDLENSHRRAFQLADLALAEEQSVSSSCGTTALTALVLGRHLLVANAGDCRAVLCRKGIAVPMSEDHRPSNLLELKRVEGMGGFVDDGYVNGYISVTRTLGDWDLKLPNVSSSPLIAEPQVEHVILTNDDEFLILGCDGIWDVMSSQYAVSLVRRGLRKHNDPHQSSQELVQEALRLNTSDNLTAIVICFSSSSCAPQPRICKSCNLTEDATNRLRSLLEGN* | 373 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 22569796 | 22572765 | - | Chy11G201820.1 | Chy11g01602 | 237363 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01602 | 372 | SMART | PP2C_SIG_2 | 85 | 340 | IPR001932 | - | |
Chy11g01602 | 372 | ProSitePatterns | PPM-type phosphatase domain signature. | 109 | 117 | IPR000222 | GO:0043169 | |
Chy11g01602 | 372 | Gene3D | - | 54 | 345 | IPR036457 | - | |
Chy11g01602 | 372 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 356 | IPR015655 | GO:0004722|GO:0006470 | |
Chy11g01602 | 372 | SMART | PP2C_4 | 60 | 338 | IPR001932 | - | |
Chy11g01602 | 372 | PANTHER | PROTEIN PHOSPHATASE 2C-LIKE PROTEIN | 1 | 356 | - | - | |
Chy11g01602 | 372 | ProSiteProfiles | PPM-type phosphatase domain profile. | 70 | 340 | IPR001932 | - | |
Chy11g01602 | 372 | Pfam | Protein phosphatase 2C | 78 | 332 | IPR001932 | - | |
Chy11g01602 | 372 | CDD | PP2Cc | 69 | 340 | IPR001932 | - | |
Chy11g01602 | 372 | SUPERFAMILY | PP2C-like | 62 | 341 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy07g00407 | Chy-Chr7:3226570 | Chy11g01602 | Chy-Chr11:22569796 | 2.41E-88 | dispersed | |
Chy11g01602 | Chy-Chr11:22569796 | Chy07g00305 | Chy-Chr7:2510023 | 5.86E-42 | dispersed | |
Chy02g02336 | Chy-Chr2:27308917 | Chy11g01602 | Chy-Chr11:22569796 | 7.61E-29 | transposed | |
Chy01g01787 | Chy-Chr1:23499833 | Chy11g01602 | Chy-Chr11:22569796 | 2.51E-130 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18774 | PF00481 | PP2C | 5.50E-65 | CL0238 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01602 | K14803 | - | csv:101207477 | 741.88 |