Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01610 ATGGCTCCTGATCTAAACACAACACTTTCCAAGAAGACGTTTGTTTTTGGTATGAAGGTATGGGTGTTTACTGGAATCTTGGTGGGGGTGTTTATTGTAATAGTCCTTGTGGTTCTATCAATATGTGTGGTTACTTCACGAAGAAAATCTAGAAGGGTAAGTGGGATGCTTCCTCTCAGCCGTATTTCCATTGCATCAAAGGAAATCAAGGAGATTGGAGTGGATCATGTTTCAGCAATCCAGCACGGCTCTGTCCCCCACGATGGATTCGACACGGAATCGGAAAAAGTTCTCTTGTATTCAAACAAGGCATATAATTACAGCATATCAAGCTCAGTTGATAACACAGAGATATATGCTATTGGCTCTGGAGAAGGAAGCAAGGAAGCAAGTGTTTTGCATAGGCCTTCAGATTCAATACCACCGGATCCTTCGCCACTCGCCGGTCTGCCAGAATTCTCACAACTGGGATGGGGTCACTGGTTCACCTTAAGAGACCTGGAACTTGCAACAATGCAGTTTTCAAATGATAATATAATTGGGGAGGGAGGATATGGAGTTGTTTATCGAGGTCATCTGATCAATGGGACACCTGTGGCTGTCAAAAAACTTTTAAATGTAGGACAAGCGGAAAGGGAATTCAAGGTGGAAGTAGAAGCGTTTGGGCATGTGCGACACAAGAACTTAGTTCGGCTGCTGGGATACTGCATTGAAGGAACACATAGGATGCTAGTATATGAGTACGTAGATAATGGAAATCTAGAGCAGTGGCTTCACGGAGCTCTATGTCATCATGGATATCTCACTTGGGAAGCAAGAATCAGAATTCTCCTTGGTACTGCTAAGGCATTGGCATATTTGCATGAGGCAATCGAGCCAAAAATCGTGCATCGAGATATCAAGGCAAGCAACATATTGATTGACGATGAGTTTAATGCAAAGCTATCAGACTTTGGGCTAGCTAAATTACTCGGTTCTGGGAAGAGTCACATTACCACCAGAGTTATGGGTACGTTTGGATATGTGGCACCAGAATATGCCAAATCTGGACTTCTAAATGAGAAGAGTGATGTTTATAGTTTTGGAGTGGTCCTTTTAGAAGCAATTACTGGAAGAGACCCCGTCGATTATAGTCGCCCAGCACATGAGGTAAATTTGGTGGATTGGCTAAAGATGATGGTGGGAAGCAAACGGTCAGAAGAGGTGGTAGATCCAAATATAGAGAGAAAACCATCAATTAGTGAACTGAAGCGAGTTCTCTTGACTGCTTTGAGGTGTGTGGATCCAGATGCTGATAAGAGGCCTAAGATGAGCCAAGTTTCTCGCATGCTTGAGTCTGAAGAATATCCAATTCGTCGACAGGACCGAAGACCCAGAAAGGGCCATGCTATTCCGACCAAAAAGGAACCTGAGAAACAGGAGAGAGGACCAAGACGACACAGATAA 1446 43.78 MAPDLNTTLSKKTFVFGMKVWVFTGILVGVFIVIVLVVLSICVVTSRRKSRRVSGMLPLSRISIASKEIKEIGVDHVSAIQHGSVPHDGFDTESEKVLLYSNKAYNYSISSSVDNTEIYAIGSGEGSKEASVLHRPSDSIPPDPSPLAGLPEFSQLGWGHWFTLRDLELATMQFSNDNIIGEGGYGVVYRGHLINGTPVAVKKLLNVGQAEREFKVEVEAFGHVRHKNLVRLLGYCIEGTHRMLVYEYVDNGNLEQWLHGALCHHGYLTWEARIRILLGTAKALAYLHEAIEPKIVHRDIKASNILIDDEFNAKLSDFGLAKLLGSGKSHITTRVMGTFGYVAPEYAKSGLLNEKSDVYSFGVVLLEAITGRDPVDYSRPAHEVNLVDWLKMMVGSKRSEEVVDPNIERKPSISELKRVLLTALRCVDPDADKRPKMSQVSRMLESEEYPIRRQDRRPRKGHAIPTKKEPEKQERGPRRHR* 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 22647691 22650018 - Chy11G201900.1 Chy11g01610 237371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01610 481 PANTHER OS01G0323000 PROTEIN 2 474 - -
Chy11g01610 481 MobiDBLite consensus disorder prediction 431 481 - -
Chy11g01610 481 ProSitePatterns Protein kinases ATP-binding region signature. 180 203 IPR017441 GO:0005524
Chy11g01610 481 MobiDBLite consensus disorder prediction 462 481 - -
Chy11g01610 481 Gene3D Phosphorylase Kinase; domain 1 155 248 - -
Chy11g01610 481 MobiDBLite consensus disorder prediction 431 455 - -
Chy11g01610 481 SMART serkin_6 174 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01610 481 SUPERFAMILY Protein kinase-like (PK-like) 158 452 IPR011009 -
Chy11g01610 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 295 307 IPR008271 GO:0004672|GO:0006468
Chy11g01610 481 ProSiteProfiles Protein kinase domain profile. 174 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01610 481 Gene3D Transferase(Phosphotransferase) domain 1 249 459 - -
Chy11g01610 481 Pfam Protein kinase domain 175 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01610 481 CDD STKc_IRAK 180 445 - -
Chy11g01610 481 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 2 474 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01010 Chy-Chr11:14271081 Chy11g01610 Chy-Chr11:22647691 0 dispersed
Chy11g01610 Chy-Chr11:22647691 Chy05g01369 Chy-Chr5:17799292 7.60E-93 dispersed
Chy11g01610 Chy-Chr11:22647691 Chy01g00887 Chy-Chr1:8089751 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71579 PF00069 Pkinase 4.90E-48 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01610 - - csv:101204202 913.294