Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01611 ATGCGAATGGGAAAATACGAGCTGGGAAGAACAATAGGGCATGGCAGTTTTGGAAAGGTCAAATTTGCTATCAACTTCGAAACTGGTCAACCTTTTGCACTCAAGGTCCTTGACAAGTCCAAAATTATCGATCTCAAATTTACTCATCAGGTATTGGCTAGTAAAAGCAAAATTTACATGGTTCTTGAGTACGTAAGCAGGGGAGAGTTGTACAACAGAATTGCAACGAAATCGCTATCAGAAGCGGAAGGCAGAAAAATCTTTCAGCAGTTAATTGATGGGGTGAGTTACTGCCATAGCAAAGGGGTTTACCATAGGGATCTTAAGCTAGAGAACATACTTGTTGATGCTAGGGGCAATATTAAGATATCAGACTTTGGATTAAGTGCGTTACACGAGCATTTAAGGGATGATGGTTTGCTTCATACAACATGTGGAAGCCCAAACTATGTGGCACCAGAGATTCTTGCTAATAGAGGATATGATGGTGCAGCCTCAGACATATGGTCTTGTGGTGTTATTTTGTTTGTAATTCTTAGTGGATTACTCCCTTTTGATGATACTAATTTGTGTGTCCTTTACCAAAAGATAATGAATGGAGAAATAAAGGAAATACCAAAGTGGGTGTCACAAGGTGCCCAAAATTTAATTAGAAGGATTCTTGATCCTAATCCTAAGTCTAGAATAACAATGGCATCTATCAAAATGGATGATTGGTTTAGAAAGGATTACCATCCAACCTACCTTGATGATGAAGAAGAGGATATATTCACTAATAATGAAGTTGTGGACTCCATAAATCAAGAGAGTTCAGATCAGTCTCCTCCTACAACCATAAATGCTTTTCAACTGATTGGAATGTTTTCATGCTTGGACCTTTCAGGTTTCTTTGAGAAAGAGGACATTTCTGAGAGGAAGATTGGGTTTACAACAAATCAGTACTCTACAAAAGAAGATATCTTCAAGCAGATTGAGTTTCTTGTGACTGAAATGGGGTTTCTAATCCATAAGAAAGAAGGAAGGTTGAAAATAATGAGAGAGCTGGAAAGGGGTGAGAATGGTGATGTGACCACCATACTTTCAATATCAGCAGAGGTTTTTGAGATAAGTCCATCGCTATATGTTGTGGAATTAAAGAAATTACATGGAGATTCTTCTTCGTTTAGACAGATCGTCGCAACTTACACTTCCGGCGAAATGGCCAGCGCCTTGCAGATGACTCCTCAGTTAGAGCAGATCCATGGTGAAATTCGTGATAATTTTCGGGCTCTTTCAAATGGGTTCCAAAGACTGGATAAGATCAAAGATTCCAGTAGACAAAGTAAGCAGTTGGAGGAGCTCACAGGAAAGATGAGAGAATGTAAAAGATTAATAAAAGATTTTGACCGTGAAATCAAGGATGAAGAGAGTAAAAATCCACCAGAAGTGAATAAGCAGCTTAACGATGAGAAGCAATCAATGATCAAAGAGCTGAATTCATTTGTTGCATTGAGGAAAACGTACATGAATAGTCTCGGTAATAAAAGGGTTGAGCTATTTGATGAGGGAGGTGTAAGTGAACCTACAGCGGATGATAATGTTCGGATGGCCTCGTCAATGACAAATCAAGAACTTATTGATGCTGGTAAGAAGACAATGGATGAGACCGATCAGGCTATTCAACGTACTCAAAAGGTGGTTGAACAAACTATTGAAGTGGGAACTCAAACTGCTGCTCAATTAAAAGGCCAAACTGACCAAATGGGCCGTATAGTAAACGAGCTTGACACAATCAATTTTTCAATTAAGAAGGCTTCCCAACTTGTGAAAGAAATTGGCAGACAGGTTGCTACAGATAAATGCATCATGCTGTTTCTATTTCTAATTGTGTGTGGAGTGATAGCCATTATCGTAGTTAAGATTGTGAACCCCAACAACAAAAACATCAGGGATATTCCTGGCTTGGCACCTCCAGTTCCTGCAAGGAGGCTTTTGTATCTGAGGGACAACTGA 1992 39.31 MRMGKYELGRTIGHGSFGKVKFAINFETGQPFALKVLDKSKIIDLKFTHQVLASKSKIYMVLEYVSRGELYNRIATKSLSEAEGRKIFQQLIDGVSYCHSKGVYHRDLKLENILVDARGNIKISDFGLSALHEHLRDDGLLHTTCGSPNYVAPEILANRGYDGAASDIWSCGVILFVILSGLLPFDDTNLCVLYQKIMNGEIKEIPKWVSQGAQNLIRRILDPNPKSRITMASIKMDDWFRKDYHPTYLDDEEEDIFTNNEVVDSINQESSDQSPPTTINAFQLIGMFSCLDLSGFFEKEDISERKIGFTTNQYSTKEDIFKQIEFLVTEMGFLIHKKEGRLKIMRELERGENGDVTTILSISAEVFEISPSLYVVELKKLHGDSSSFRQIVATYTSGEMASALQMTPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIKDFDREIKDEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVSEPTADDNVRMASSMTNQELIDAGKKTMDETDQAIQRTQKVVEQTIEVGTQTAAQLKGQTDQMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNNKNIRDIPGLAPPVPARRLLYLRDN* 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 22657667 22674807 - Chy11G201910.1 Chy11g01611 237372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01611 663 Gene3D - 534 613 - -
Chy11g01611 663 ProSiteProfiles Protein kinase domain profile. 6 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01611 663 Gene3D Transferase(Phosphotransferase) domain 1 2 280 - -
Chy11g01611 663 Gene3D Kinase associated domain 1, KA1 281 403 - -
Chy11g01611 663 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 543 605 IPR000727 -
Chy11g01611 663 PANTHER CBL-INTERACTING PROTEIN KINASE 21 1 51 - -
Chy11g01611 663 SMART tSNARE_6 538 605 IPR000727 -
Chy11g01611 663 CDD SNARE_SNAP25N_23N_29N_SEC9N 542 604 IPR044766 GO:0005484|GO:0031201
Chy11g01611 663 PANTHER CBL-INTERACTING PROTEIN KINASE 21 49 396 - -
Chy11g01611 663 PANTHER - 49 396 - -
Chy11g01611 663 CDD CIPK_C 280 391 - -
Chy11g01611 663 PANTHER - 1 51 - -
Chy11g01611 663 Pfam Protein kinase domain 50 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01611 663 SUPERFAMILY Protein kinase-like (PK-like) 2 273 IPR011009 -
Chy11g01611 663 ProSiteProfiles NAF domain profile. 274 298 IPR018451 GO:0007165
Chy11g01611 663 SUPERFAMILY SNARE fusion complex 533 606 - -
Chy11g01611 663 Pfam NAF domain 276 337 IPR004041 GO:0007165
Chy11g01611 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 103 115 IPR008271 GO:0004672|GO:0006468
Chy11g01611 663 Coils Coil 444 471 - -
Chy11g01611 663 SMART serkin_6 6 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01611 663 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01611 Chy-Chr11:22657667 Chy05g00039 Chy-Chr5:263124 3.31E-117 dispersed
Chy11g01611 Chy-Chr11:22657667 Chy11g01614 Chy-Chr11:22693527 4.63E-19 proximal
Chy11g01611 Chy-Chr11:22657667 Chy11g01612 Chy-Chr11:22678895 0 tandem
Chy06g02103 Chy-Chr6:25206342 Chy11g01611 Chy-Chr11:22657667 2.52E-110 transposed
Chy11g01611 Chy-Chr11:22657667 Chy06g00794 Chy-Chr6:5566387 9.28E-153 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71580 PF00069 Pkinase 3.60E-50 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01611 K07198 - csv:116404531 733.021