Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01611 | ATGCGAATGGGAAAATACGAGCTGGGAAGAACAATAGGGCATGGCAGTTTTGGAAAGGTCAAATTTGCTATCAACTTCGAAACTGGTCAACCTTTTGCACTCAAGGTCCTTGACAAGTCCAAAATTATCGATCTCAAATTTACTCATCAGGTATTGGCTAGTAAAAGCAAAATTTACATGGTTCTTGAGTACGTAAGCAGGGGAGAGTTGTACAACAGAATTGCAACGAAATCGCTATCAGAAGCGGAAGGCAGAAAAATCTTTCAGCAGTTAATTGATGGGGTGAGTTACTGCCATAGCAAAGGGGTTTACCATAGGGATCTTAAGCTAGAGAACATACTTGTTGATGCTAGGGGCAATATTAAGATATCAGACTTTGGATTAAGTGCGTTACACGAGCATTTAAGGGATGATGGTTTGCTTCATACAACATGTGGAAGCCCAAACTATGTGGCACCAGAGATTCTTGCTAATAGAGGATATGATGGTGCAGCCTCAGACATATGGTCTTGTGGTGTTATTTTGTTTGTAATTCTTAGTGGATTACTCCCTTTTGATGATACTAATTTGTGTGTCCTTTACCAAAAGATAATGAATGGAGAAATAAAGGAAATACCAAAGTGGGTGTCACAAGGTGCCCAAAATTTAATTAGAAGGATTCTTGATCCTAATCCTAAGTCTAGAATAACAATGGCATCTATCAAAATGGATGATTGGTTTAGAAAGGATTACCATCCAACCTACCTTGATGATGAAGAAGAGGATATATTCACTAATAATGAAGTTGTGGACTCCATAAATCAAGAGAGTTCAGATCAGTCTCCTCCTACAACCATAAATGCTTTTCAACTGATTGGAATGTTTTCATGCTTGGACCTTTCAGGTTTCTTTGAGAAAGAGGACATTTCTGAGAGGAAGATTGGGTTTACAACAAATCAGTACTCTACAAAAGAAGATATCTTCAAGCAGATTGAGTTTCTTGTGACTGAAATGGGGTTTCTAATCCATAAGAAAGAAGGAAGGTTGAAAATAATGAGAGAGCTGGAAAGGGGTGAGAATGGTGATGTGACCACCATACTTTCAATATCAGCAGAGGTTTTTGAGATAAGTCCATCGCTATATGTTGTGGAATTAAAGAAATTACATGGAGATTCTTCTTCGTTTAGACAGATCGTCGCAACTTACACTTCCGGCGAAATGGCCAGCGCCTTGCAGATGACTCCTCAGTTAGAGCAGATCCATGGTGAAATTCGTGATAATTTTCGGGCTCTTTCAAATGGGTTCCAAAGACTGGATAAGATCAAAGATTCCAGTAGACAAAGTAAGCAGTTGGAGGAGCTCACAGGAAAGATGAGAGAATGTAAAAGATTAATAAAAGATTTTGACCGTGAAATCAAGGATGAAGAGAGTAAAAATCCACCAGAAGTGAATAAGCAGCTTAACGATGAGAAGCAATCAATGATCAAAGAGCTGAATTCATTTGTTGCATTGAGGAAAACGTACATGAATAGTCTCGGTAATAAAAGGGTTGAGCTATTTGATGAGGGAGGTGTAAGTGAACCTACAGCGGATGATAATGTTCGGATGGCCTCGTCAATGACAAATCAAGAACTTATTGATGCTGGTAAGAAGACAATGGATGAGACCGATCAGGCTATTCAACGTACTCAAAAGGTGGTTGAACAAACTATTGAAGTGGGAACTCAAACTGCTGCTCAATTAAAAGGCCAAACTGACCAAATGGGCCGTATAGTAAACGAGCTTGACACAATCAATTTTTCAATTAAGAAGGCTTCCCAACTTGTGAAAGAAATTGGCAGACAGGTTGCTACAGATAAATGCATCATGCTGTTTCTATTTCTAATTGTGTGTGGAGTGATAGCCATTATCGTAGTTAAGATTGTGAACCCCAACAACAAAAACATCAGGGATATTCCTGGCTTGGCACCTCCAGTTCCTGCAAGGAGGCTTTTGTATCTGAGGGACAACTGA | 1992 | 39.31 | MRMGKYELGRTIGHGSFGKVKFAINFETGQPFALKVLDKSKIIDLKFTHQVLASKSKIYMVLEYVSRGELYNRIATKSLSEAEGRKIFQQLIDGVSYCHSKGVYHRDLKLENILVDARGNIKISDFGLSALHEHLRDDGLLHTTCGSPNYVAPEILANRGYDGAASDIWSCGVILFVILSGLLPFDDTNLCVLYQKIMNGEIKEIPKWVSQGAQNLIRRILDPNPKSRITMASIKMDDWFRKDYHPTYLDDEEEDIFTNNEVVDSINQESSDQSPPTTINAFQLIGMFSCLDLSGFFEKEDISERKIGFTTNQYSTKEDIFKQIEFLVTEMGFLIHKKEGRLKIMRELERGENGDVTTILSISAEVFEISPSLYVVELKKLHGDSSSFRQIVATYTSGEMASALQMTPQLEQIHGEIRDNFRALSNGFQRLDKIKDSSRQSKQLEELTGKMRECKRLIKDFDREIKDEESKNPPEVNKQLNDEKQSMIKELNSFVALRKTYMNSLGNKRVELFDEGGVSEPTADDNVRMASSMTNQELIDAGKKTMDETDQAIQRTQKVVEQTIEVGTQTAAQLKGQTDQMGRIVNELDTINFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVIAIIVVKIVNPNNKNIRDIPGLAPPVPARRLLYLRDN* | 664 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 22657667 | 22674807 | - | Chy11G201910.1 | Chy11g01611 | 237372 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01611 | 663 | Gene3D | - | 534 | 613 | - | - | |
Chy11g01611 | 663 | ProSiteProfiles | Protein kinase domain profile. | 6 | 240 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01611 | 663 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 280 | - | - | |
Chy11g01611 | 663 | Gene3D | Kinase associated domain 1, KA1 | 281 | 403 | - | - | |
Chy11g01611 | 663 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 543 | 605 | IPR000727 | - | |
Chy11g01611 | 663 | PANTHER | CBL-INTERACTING PROTEIN KINASE 21 | 1 | 51 | - | - | |
Chy11g01611 | 663 | SMART | tSNARE_6 | 538 | 605 | IPR000727 | - | |
Chy11g01611 | 663 | CDD | SNARE_SNAP25N_23N_29N_SEC9N | 542 | 604 | IPR044766 | GO:0005484|GO:0031201 | |
Chy11g01611 | 663 | PANTHER | CBL-INTERACTING PROTEIN KINASE 21 | 49 | 396 | - | - | |
Chy11g01611 | 663 | PANTHER | - | 49 | 396 | - | - | |
Chy11g01611 | 663 | CDD | CIPK_C | 280 | 391 | - | - | |
Chy11g01611 | 663 | PANTHER | - | 1 | 51 | - | - | |
Chy11g01611 | 663 | Pfam | Protein kinase domain | 50 | 240 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01611 | 663 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 273 | IPR011009 | - | |
Chy11g01611 | 663 | ProSiteProfiles | NAF domain profile. | 274 | 298 | IPR018451 | GO:0007165 | |
Chy11g01611 | 663 | SUPERFAMILY | SNARE fusion complex | 533 | 606 | - | - | |
Chy11g01611 | 663 | Pfam | NAF domain | 276 | 337 | IPR004041 | GO:0007165 | |
Chy11g01611 | 663 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 103 | 115 | IPR008271 | GO:0004672|GO:0006468 | |
Chy11g01611 | 663 | Coils | Coil | 444 | 471 | - | - | |
Chy11g01611 | 663 | SMART | serkin_6 | 6 | 240 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01611 | 663 | ProSitePatterns | Protein kinases ATP-binding region signature. | 12 | 35 | IPR017441 | GO:0005524 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy11g01611 | Chy-Chr11:22657667 | Chy05g00039 | Chy-Chr5:263124 | 3.31E-117 | dispersed | |
Chy11g01611 | Chy-Chr11:22657667 | Chy11g01614 | Chy-Chr11:22693527 | 4.63E-19 | proximal | |
Chy11g01611 | Chy-Chr11:22657667 | Chy11g01612 | Chy-Chr11:22678895 | 0 | tandem | |
Chy06g02103 | Chy-Chr6:25206342 | Chy11g01611 | Chy-Chr11:22657667 | 2.52E-110 | transposed | |
Chy11g01611 | Chy-Chr11:22657667 | Chy06g00794 | Chy-Chr6:5566387 | 9.28E-153 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71580 | PF00069 | Pkinase | 3.60E-50 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01611 | K07198 | - | csv:116404531 | 733.021 |