Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01612 ATGCGACTGGGGAAGTATGAGATTGGGAAAACTCTTGGGCATGGCAATTTTGGGAAGGTCAAATATGCTATTGATTTTGAAACTCAACAACCTTTTGCTGTCAAAGAACTTGATAAGACCAAGATTATCGATCTTAACATCACTCATCAGTTTAAAAGGGAAATTTACACACTCAAACTTCTCAAGCATCCAAACATAGTGAGGCTACATGAGGTATTAGCTAGTAAAAGCAAAATTTACATGGTCCTTGAGTACGTCAATGGTGGAGAATTGTTTGAGACAATTTCATCTAAGGGAAGGTTATCAGAAGCTCAAGGCAGAAAAATCTTCCAACAATTACTTGACGGTGTGAGTTATTGCCACCGCAAAGGCGTTTACCACAGAGATATTAAGCTGGAGAACATACTAATTGATGCGAATGGAAACGTTAAGATAACTGACTTTGGCTTGAGTGCTTTACCTGACAATTTTAGGGGTGATGGTTTGCTTCACACAACATGTGGAAGCCCAAACTATGTGGCACCAGAGATTCTTGCTAATAGAGGATATGATGGTGCAGCCTCAGATATATGGTCTTGTGGTGTTATCTTGTTTGTTATTCTCACTGGATCTCTTCCTTTTGATGATAGAAATTTGTCTGTTCTTTATCATAAGATTTTGAAAGGAGAAATCCATCTACCAAAATGGCTATCACAAGGAGCCAAAAATTTGATAAGAAGGATTCTTGATCCTAACCCTAAGTCTAGAATAACAATGGCATCTATCAAAATGGATGATTGGTTTAGAAAGGATTATCATCCAGCCTATCTTGATGAGGAAGAAGAAGATACACACACTAATGAAGCTATATCCTTCTCAATGCATCAAGTGCCATCTTATCTCGAGGGAAAGTGTTCAGAATCTCCCACAACTATAAATGCTTTTCAACTCATTGGAATGTCTTCATGCTTGGACCTTTCAGGTTTCTTTGAGAAAGAGGACATTTCTGAGAGAAAGGTTAGATTTACCACCATTCACTCTACAAAAGAAGATATCCTCAAGCGGATGGAGGATGTTGTAACTGATATGGGGTTTCTTGTCCAGAAGAAAGACAGAAGGTTGAAAGTAATGAGAGAGGAAAAGGATGAGAATGGTATGGCCACCATACTTTCAATATTAGCAGAGGTTTTTGAGATAAGTCCATCGTTATACGGTGTAGAATTAAAAAAGTTGCGTGGAGATTTATCTTTGTATCGACAGTTGTGTAAAATATTATCTAGTGATTTGGGTATCCCCTCCAGCGAAGACTCTCGGTGA 1296 38.35 MRLGKYEIGKTLGHGNFGKVKYAIDFETQQPFAVKELDKTKIIDLNITHQFKREIYTLKLLKHPNIVRLHEVLASKSKIYMVLEYVNGGELFETISSKGRLSEAQGRKIFQQLLDGVSYCHRKGVYHRDIKLENILIDANGNVKITDFGLSALPDNFRGDGLLHTTCGSPNYVAPEILANRGYDGAASDIWSCGVILFVILTGSLPFDDRNLSVLYHKILKGEIHLPKWLSQGAKNLIRRILDPNPKSRITMASIKMDDWFRKDYHPAYLDEEEEDTHTNEAISFSMHQVPSYLEGKCSESPTTINAFQLIGMSSCLDLSGFFEKEDISERKVRFTTIHSTKEDILKRMEDVVTDMGFLVQKKDRRLKVMREEKDENGMATILSILAEVFEISPSLYGVELKKLRGDLSLYRQLCKILSSDLGIPSSEDSR* 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 22678895 22685190 - Chy11G201920.1 Chy11g01612 237373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01612 431 ProSiteProfiles NAF domain profile. 300 324 IPR018451 GO:0007165
Chy11g01612 431 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Chy11g01612 431 Pfam Protein kinase domain 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01612 431 Gene3D Transferase(Phosphotransferase) domain 1 88 289 - -
Chy11g01612 431 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 3 430 - -
Chy11g01612 431 Gene3D Kinase associated domain 1, KA1 299 424 - -
Chy11g01612 431 ProSiteProfiles Protein kinase domain profile. 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01612 431 CDD CIPK_C 306 422 - -
Chy11g01612 431 SMART serkin_6 6 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01612 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Chy11g01612 431 SUPERFAMILY Protein kinase-like (PK-like) 3 293 IPR011009 -
Chy11g01612 431 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Chy11g01612 431 Pfam NAF domain 302 362 IPR004041 GO:0007165
Chy11g01612 431 PANTHER SERINE/THREONINE KINASE 3 430 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00794 Chy-Chr6:5566387 Chy11g01612 Chy-Chr11:22678895 5.32E-180 dispersed
Chy11g01612 Chy-Chr11:22678895 Chy06g00062 Chy-Chr6:425939 8.48E-150 dispersed
Chy11g01611 Chy-Chr11:22657667 Chy11g01612 Chy-Chr11:22678895 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71581 PF00069 Pkinase 1.50E-73 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01612 K07198 - csv:101206030 818.535