Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01612 | ATGCGACTGGGGAAGTATGAGATTGGGAAAACTCTTGGGCATGGCAATTTTGGGAAGGTCAAATATGCTATTGATTTTGAAACTCAACAACCTTTTGCTGTCAAAGAACTTGATAAGACCAAGATTATCGATCTTAACATCACTCATCAGTTTAAAAGGGAAATTTACACACTCAAACTTCTCAAGCATCCAAACATAGTGAGGCTACATGAGGTATTAGCTAGTAAAAGCAAAATTTACATGGTCCTTGAGTACGTCAATGGTGGAGAATTGTTTGAGACAATTTCATCTAAGGGAAGGTTATCAGAAGCTCAAGGCAGAAAAATCTTCCAACAATTACTTGACGGTGTGAGTTATTGCCACCGCAAAGGCGTTTACCACAGAGATATTAAGCTGGAGAACATACTAATTGATGCGAATGGAAACGTTAAGATAACTGACTTTGGCTTGAGTGCTTTACCTGACAATTTTAGGGGTGATGGTTTGCTTCACACAACATGTGGAAGCCCAAACTATGTGGCACCAGAGATTCTTGCTAATAGAGGATATGATGGTGCAGCCTCAGATATATGGTCTTGTGGTGTTATCTTGTTTGTTATTCTCACTGGATCTCTTCCTTTTGATGATAGAAATTTGTCTGTTCTTTATCATAAGATTTTGAAAGGAGAAATCCATCTACCAAAATGGCTATCACAAGGAGCCAAAAATTTGATAAGAAGGATTCTTGATCCTAACCCTAAGTCTAGAATAACAATGGCATCTATCAAAATGGATGATTGGTTTAGAAAGGATTATCATCCAGCCTATCTTGATGAGGAAGAAGAAGATACACACACTAATGAAGCTATATCCTTCTCAATGCATCAAGTGCCATCTTATCTCGAGGGAAAGTGTTCAGAATCTCCCACAACTATAAATGCTTTTCAACTCATTGGAATGTCTTCATGCTTGGACCTTTCAGGTTTCTTTGAGAAAGAGGACATTTCTGAGAGAAAGGTTAGATTTACCACCATTCACTCTACAAAAGAAGATATCCTCAAGCGGATGGAGGATGTTGTAACTGATATGGGGTTTCTTGTCCAGAAGAAAGACAGAAGGTTGAAAGTAATGAGAGAGGAAAAGGATGAGAATGGTATGGCCACCATACTTTCAATATTAGCAGAGGTTTTTGAGATAAGTCCATCGTTATACGGTGTAGAATTAAAAAAGTTGCGTGGAGATTTATCTTTGTATCGACAGTTGTGTAAAATATTATCTAGTGATTTGGGTATCCCCTCCAGCGAAGACTCTCGGTGA | 1296 | 38.35 | MRLGKYEIGKTLGHGNFGKVKYAIDFETQQPFAVKELDKTKIIDLNITHQFKREIYTLKLLKHPNIVRLHEVLASKSKIYMVLEYVNGGELFETISSKGRLSEAQGRKIFQQLLDGVSYCHRKGVYHRDIKLENILIDANGNVKITDFGLSALPDNFRGDGLLHTTCGSPNYVAPEILANRGYDGAASDIWSCGVILFVILTGSLPFDDRNLSVLYHKILKGEIHLPKWLSQGAKNLIRRILDPNPKSRITMASIKMDDWFRKDYHPAYLDEEEEDTHTNEAISFSMHQVPSYLEGKCSESPTTINAFQLIGMSSCLDLSGFFEKEDISERKVRFTTIHSTKEDILKRMEDVVTDMGFLVQKKDRRLKVMREEKDENGMATILSILAEVFEISPSLYGVELKKLRGDLSLYRQLCKILSSDLGIPSSEDSR* | 432 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 22678895 | 22685190 | - | Chy11G201920.1 | Chy11g01612 | 237373 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01612 | 431 | ProSiteProfiles | NAF domain profile. | 300 | 324 | IPR018451 | GO:0007165 | |
Chy11g01612 | 431 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 87 | - | - | |
Chy11g01612 | 431 | Pfam | Protein kinase domain | 6 | 261 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01612 | 431 | Gene3D | Transferase(Phosphotransferase) domain 1 | 88 | 289 | - | - | |
Chy11g01612 | 431 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 3 | 430 | - | - | |
Chy11g01612 | 431 | Gene3D | Kinase associated domain 1, KA1 | 299 | 424 | - | - | |
Chy11g01612 | 431 | ProSiteProfiles | Protein kinase domain profile. | 6 | 261 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01612 | 431 | CDD | CIPK_C | 306 | 422 | - | - | |
Chy11g01612 | 431 | SMART | serkin_6 | 6 | 261 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01612 | 431 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 125 | 137 | IPR008271 | GO:0004672|GO:0006468 | |
Chy11g01612 | 431 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 293 | IPR011009 | - | |
Chy11g01612 | 431 | ProSitePatterns | Protein kinases ATP-binding region signature. | 12 | 35 | IPR017441 | GO:0005524 | |
Chy11g01612 | 431 | Pfam | NAF domain | 302 | 362 | IPR004041 | GO:0007165 | |
Chy11g01612 | 431 | PANTHER | SERINE/THREONINE KINASE | 3 | 430 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g00794 | Chy-Chr6:5566387 | Chy11g01612 | Chy-Chr11:22678895 | 5.32E-180 | dispersed | |
Chy11g01612 | Chy-Chr11:22678895 | Chy06g00062 | Chy-Chr6:425939 | 8.48E-150 | dispersed | |
Chy11g01611 | Chy-Chr11:22657667 | Chy11g01612 | Chy-Chr11:22678895 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71581 | PF00069 | Pkinase | 1.50E-73 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01612 | K07198 | - | csv:101206030 | 818.535 |