Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01635 ATGGATCGAAGGGATCCGATGGCGTTATCGGGGTCGCAATCGTTTTATATGCAGAGGGGAATTAGCAACTCTGGGTCTGGAGCGCAGGGTTTGCGTTCCTCTACTAACCCAAATGTGGCATTTCAAACCAACACTGGAGGGAACAATGTTGGATCAGGGTTGCCAATGGACCCTAACTCTGGTATTTCACCTTATGGTGGCAATGTAGGCGCTCAATCTGGTGGAGTGGTTGCCAGCGAGCCCGTGAAACGCAAGCGAGGCCGCCCTCGCAAGTATGGAACTGAAGGGACTGTGTCTTTGGCACTCTCTCCCTCCCCTTCTGCTGTAAATCCAGCCACTGTAGCTTCTTCCCCAAAACGGGGAAGGGGACGGCCTCCCGGCTCTGGAAAGAAGCAACAATTGGCTTCTCTTTGTGAAACACTTTCTGGGTCAGCTGGCATGGGTTTTACTCCACATGTTATCACCATTGGAATAGGAGAAGATGTTGCTGCCAAGATCATGTCATTTTCACAGCAGGGACCAAGAGTTGTATGCATCTTGTCAGCAAATGGTGCTGTTTCCACTGTTACTCTTCGTCAGCCTTCAACTTCAGGAGGCACGGTTACATACGAGGGGCGTTTTGAGATAATATGTCTGTCGGGCTCTTATGCTCTTGGTGAAATTGCTGGTTCTAGGAACCGCACTGGTGGTCTTAGTGTCTCCCTTGCTAGCCCTGATGGGCGTGTTATTGGCGGTGGGGTAGGAGGAGCACTTGTTGCAGCAACCCCTGTTCAGGTGATAGTAGGAAGCTTCATGTGGGGTAGTTCGAAATCAAAGTACAAGAAGAGGGAAGCTATTGAAGGTGTGATCGACTCGGATCATCAGTCTGTAGATCATGCAGTTGCAATTGCGAGTGTGCAGCAGAATCAGAATCTGACTCCAACGTCCTCAGTTAGTATGTGGCCATCCTCACAGTCTTTGGACATGCGTAATGCTCACATTGACATCGATCTGATGCGCGGCTGA 1005 50.25 MDRRDPMALSGSQSFYMQRGISNSGSGAQGLRSSTNPNVAFQTNTGGNNVGSGLPMDPNSGISPYGGNVGAQSGGVVASEPVKRKRGRPRKYGTEGTVSLALSPSPSAVNPATVASSPKRGRGRPPGSGKKQQLASLCETLSGSAGMGFTPHVITIGIGEDVAAKIMSFSQQGPRVVCILSANGAVSTVTLRQPSTSGGTVTYEGRFEIICLSGSYALGEIAGSRNRTGGLSVSLASPDGRVIGGGVGGALVAATPVQVIVGSFMWGSSKSKYKKREAIEGVIDSDHQSVDHAVAIASVQQNQNLTPTSSVSMWPSSQSLDMRNAHIDIDLMRG* 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 22872895 22876097 - Chy11G202150.1 Chy11g01635 237396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01635 334 SMART AT_hook_2 119 131 IPR017956 GO:0003677
Chy11g01635 334 SMART AT_hook_2 83 95 IPR017956 GO:0003677
Chy11g01635 334 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 28 325 IPR039605 GO:0003680
Chy11g01635 334 MobiDBLite consensus disorder prediction 11 56 - -
Chy11g01635 334 Gene3D - 151 284 - -
Chy11g01635 334 CDD DUF296 150 239 IPR005175 -
Chy11g01635 334 ProSiteProfiles PPC domain profile profile. 145 286 IPR005175 -
Chy11g01635 334 MobiDBLite consensus disorder prediction 98 114 - -
Chy11g01635 334 Pfam Plants and Prokaryotes Conserved (PCC) domain 151 264 IPR005175 -
Chy11g01635 334 PRINTS AT-hook-like domain signature 83 93 IPR017956 GO:0003677
Chy11g01635 334 PRINTS AT-hook-like domain signature 117 128 IPR017956 GO:0003677
Chy11g01635 334 MobiDBLite consensus disorder prediction 1 134 - -
Chy11g01635 334 SUPERFAMILY AF0104/ALDC/Ptd012-like 149 274 - -
Chy11g01635 334 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 28 325 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g02136 Chy-Chr6:25703791 Chy11g01635 Chy-Chr11:22872895 5.13E-56 dispersed
Chy07g00425 Chy-Chr7:3288150 Chy11g01635 Chy-Chr11:22872895 2.27E-66 dispersed
Chy10g00178 Chy-Chr10:4339040 Chy11g01635 Chy-Chr11:22872895 5.31E-60 dispersed
Chy11g01635 Chy-Chr11:22872895 Chy06g00871 Chy-Chr6:6294210 9.51E-58 dispersed
Chy11g01635 Chy-Chr11:22872895 Chy09g01218 Chy-Chr9:14286633 7.99E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01635 - - csv:101203138 637.106