Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01644 ATGAGCAGTAACATGGAGAGGCCGCAGAAATCTAGACCTCCCGAACTTATTAAGTTGAATGATGCAGCGAAATTGGCAGCGCAGTTGATGAGCAAGATGACTAATTCCGAGTGGAAAGAAACTGGAGTTGATAATGAATCAACTGCGATTGAACCCGAGATGCGACCTCCTAGACTTGGACTTGGAGCCAAAGTAACACGCCATTTCAGAAATGGACCGTCTAATGACCCACTTGATAGAAAACTATATACCAAATTAGATGCTGGGAAAAAACAAGCTGCTAGAAAGATGTCGGAGGATACTCCCGTACTTAACAATAAAGATGAAGACGATGACGACAATGATGAAGAAGAAGAGAGTAGAACTGCCATCTTCAGTAAGAAGCGAGCACCAAAGCCAGTCACTATGCCTCCTTTGCAGGGGAAGAAAAAGAGAAGGTTTGGTGATTCTATACGAATTATGGCTGGTAGTAGTGGAGAAGATTTGGTTTATGTGGCTGTGGGAAATGATATAAACGAGTGTAAATTGAATTTGGTTTATGCTATAAAGCACTCGGGTGGGAGGAGGATTTGCATCCTTCATGTTCATGAGCCAGCAAAGTTTATTCCAATCTTGGGAACAAAATTTTTGGCAAGTTCTCTGAAAGAAGAGGAAGTAAATGCATATCGCGAACTTGAGAGGCAGGATGCTAATAAGATTCTCGATATATTTCTTCTCCTCTGTCACCAAGCTGGGGCTCAGGCAGAGAAACTTTATTTTGAATCCGACAAAATTAAGAAGGGAATTGTCGAACTTGTCTCGCTTCATGGAATTAGCAACCTTGTTATGGGTGCAGCAGCAGACAAGTATTACTCAAGAAAAATGACAAAAATCAGATCGAGGAAAGCTATGTATGTTCACCTGAATGCAGCAGCTTCCTGTCAAATTCAGTTTGTTTGCAAAGGGCAGTTAATTCGCATTAGGGAAGCTTGTCCACAGGAAACTCATGCAGATATCTCACCATCATCACCTCAGTCACAGAACATCAACGGGGTAAGTTGGAGAACAGAGCAGTTTGGCCTATTTAATGGGAGAATAAGCAACAGTCCAACAATTGTTATGGAAAGGCTTACGATTTCAGAGACCATTTCAAATGCTAGTGGGAGCCCTTTTGAACGTTCATATGCAACAAGTCCTTCTAGTGGGTGTATGGATGTTGCATCTTCCAGGACTGAGGAAGATGCCTATGGACTAGGATTAAATTCTCCTCTTCCGTTGACAAATTTTGCTACCAACACTTCTCCTAATTTTTCGGGATTCCAGCAAGATGGAAGTGCTGATGATAGTCTTTATATTCAACTTGAAAAGGCGATAACTGATGCAGCAAACGCCAGGCGAGAAGCCTTTAGAGAGGCATTGAAGCGAGCAAAAGCTGAAAAAGAACTTGACGAAGCTATTTGCTGGGCTAAAGTTTCTGAAACCTTGTATGCTGAAGAGTCAAGAGGAAGGAAAGACGCTGAAGAAGAACTGTCAAAAGAAAGAGAAGAACTTGACAATGTGAAAAACCAAGTAAATGAAATGATGAAGGAGCTCCAAATTGCCCGAAATAACGGATTAAAATTAGAGAACCAAATTGCACAATCTGATGAGATGGTGAAGGAGTTGGAGCAGAAGATCCTCTCAGCCATAGAACTGCTGCATAATTACAAAAATGATCGAGATGAATTGCTGAAGCAACGAGATGAAGCACTCAAAGAATTGGATGACATAAGGACAAGACAAGTAGAGGCCATATCTCAACATAGTGCTCAACTAATCTCTGAATTCTCATTCTCAGAAATTGTGGTAGCGACCCGGAAATTTGATCCCTCCCTCAAGATTGTAAAGGATGCAAATGGAAGCATGTATAAAGGCCTGCTGTATAACACTGAGGTTTCCATAAAAATGCTCTGTTCTCATAACTTGCAGAATCCATTAGAGTTTCAACGTGAGGTCGATGCATTGAGTAAGCTTAGGCATCCCAATATTGCCACGCTCATTGGAGTCTGTCCCGAGGCTTGCATTCTTGTTTATGACTATTTTCCGAATGGAAATTTAGAAGATAGGCTAGCTTGCAAGGACAATTCTTCTCCGTTATCATGGAAAACTCGGATACTTATTGCTACACAGTTATGCTCAGCTCTTATATTTATTCATTCGAATAAAATTTGCAAGACCGTTCATGGTGACATGAAGCCTTCCAATGTACTATTGGATGCAAATTATGTTCCTAAACTTGCAGGATTTGGAACTTGTCATTTTTTGACTCATGATGAAAAGTTGAGTTACAATGAGAATTTATCTGTCGGATATGATGCGAAGGGGAATCATGAATTCCCTCTCACAACAGAGTTGGACGTTTATTCATTTGGCACGGTATTACTAAGTTTGTTAACTGGAAAATCATACTTGAGGATGAAAGAAGATGTCCAGATCGCCATAAAGAAACGAAAATTGAAAGATCTATTGGATCCACGAGCAGGGGACTGGCCGTTCGTGCAGGCTGAACAGTTAGCCCAGTTGGCATTGAGGTGTTGCGATACAGATAGTATGTACAGGCCAGACCTTGTGTCTGATGTGTGGAGAGTACTTGAGCCAATGAGGGCTTCTTGTGGAGGTTCACTATCAGTATGTCTAAGCTTTGGGGACCAGCAAGTGCAACCTCCTCCTTATTTCATATGTCCTATTTTTCAGGAAGTCATGGAGGATCCTCATGTTGCAGCCGACGGGTTTACCTATGAGGCAGAGGCTTTGAGAGGATGGTTGGACAGTGGGCACGACACTTCACCGATGACGAACCTAAGGCTCGATCACCAAAACCTCGTCCCTAACCGTGCTCTTCGTTCTGTAATTCAAGAATGGTTGCAACAGCACCAGTAA 2898 41.99 MSSNMERPQKSRPPELIKLNDAAKLAAQLMSKMTNSEWKETGVDNESTAIEPEMRPPRLGLGAKVTRHFRNGPSNDPLDRKLYTKLDAGKKQAARKMSEDTPVLNNKDEDDDDNDEEEESRTAIFSKKRAPKPVTMPPLQGKKKRRFGDSIRIMAGSSGEDLVYVAVGNDINECKLNLVYAIKHSGGRRICILHVHEPAKFIPILGTKFLASSLKEEEVNAYRELERQDANKILDIFLLLCHQAGAQAEKLYFESDKIKKGIVELVSLHGISNLVMGAAADKYYSRKMTKIRSRKAMYVHLNAAASCQIQFVCKGQLIRIREACPQETHADISPSSPQSQNINGVSWRTEQFGLFNGRISNSPTIVMERLTISETISNASGSPFERSYATSPSSGCMDVASSRTEEDAYGLGLNSPLPLTNFATNTSPNFSGFQQDGSADDSLYIQLEKAITDAANARREAFREALKRAKAEKELDEAICWAKVSETLYAEESRGRKDAEEELSKEREELDNVKNQVNEMMKELQIARNNGLKLENQIAQSDEMVKELEQKILSAIELLHNYKNDRDELLKQRDEALKELDDIRTRQVEAISQHSAQLISEFSFSEIVVATRKFDPSLKIVKDANGSMYKGLLYNTEVSIKMLCSHNLQNPLEFQREVDALSKLRHPNIATLIGVCPEACILVYDYFPNGNLEDRLACKDNSSPLSWKTRILIATQLCSALIFIHSNKICKTVHGDMKPSNVLLDANYVPKLAGFGTCHFLTHDEKLSYNENLSVGYDAKGNHEFPLTTELDVYSFGTVLLSLLTGKSYLRMKEDVQIAIKKRKLKDLLDPRAGDWPFVQAEQLAQLALRCCDTDSMYRPDLVSDVWRVLEPMRASCGGSLSVCLSFGDQQVQPPPYFICPIFQEVMEDPHVAADGFTYEAEALRGWLDSGHDTSPMTNLRLDHQNLVPNRALRSVIQEWLQQHQ* 966
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 22933805 22942891 + Chy11G202240.1 Chy11g01644 237405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01644 965 MobiDBLite consensus disorder prediction 80 104 - -
Chy11g01644 965 SUPERFAMILY RING/U-box 889 964 - -
Chy11g01644 965 Gene3D Transferase(Phosphotransferase) domain 1 688 872 - -
Chy11g01644 965 Gene3D Phosphorylase Kinase; domain 1 584 686 - -
Chy11g01644 965 Pfam Protein kinase domain 626 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01644 965 Pfam U-box domain 895 965 IPR003613 GO:0004842|GO:0016567
Chy11g01644 965 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 33 158 960 - -
Chy11g01644 965 Pfam Protein of unknown function (DUF3245) 17 144 IPR021641 -
Chy11g01644 965 PANTHER OS02G0152300 PROTEIN 158 960 - -
Chy11g01644 965 Coils Coil 452 472 - -
Chy11g01644 965 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 892 965 IPR013083 -
Chy11g01644 965 MobiDBLite consensus disorder prediction 105 119 - -
Chy11g01644 965 CDD RING-Ubox_WDSUB1_like 898 939 - -
Chy11g01644 965 Coils Coil 489 586 - -
Chy11g01644 965 ProSiteProfiles Protein kinase domain profile. 593 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01644 965 MobiDBLite consensus disorder prediction 36 142 - -
Chy11g01644 965 CDD STK_N 162 315 - -
Chy11g01644 965 SUPERFAMILY Protein kinase-like (PK-like) 596 868 IPR011009 -
Chy11g01644 965 SMART serkin_6 614 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01644 965 SMART Ubox_2 897 960 IPR003613 GO:0004842|GO:0016567
Chy11g01644 965 ProSiteProfiles U-box domain profile. 893 965 IPR003613 GO:0004842|GO:0016567
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy06g00167 Chy11g01644 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00762 Chy-Chr2:4717292 Chy11g01644 Chy-Chr11:22933805 5.36E-82 dispersed
Chy06g00955 Chy-Chr6:7021445 Chy11g01644 Chy-Chr11:22933805 9.91E-32 dispersed
Chy11g01644 Chy-Chr11:22933805 Chy05g01451 Chy-Chr5:18361498 3.95E-76 dispersed
Chy02g02612 Chy-Chr2:29306563 Chy11g01644 Chy-Chr11:22933805 7.47E-16 transposed
Chy11g01234 Chy-Chr11:18463723 Chy11g01644 Chy-Chr11:22933805 7.96E-124 transposed
Chy11g01644 Chy-Chr11:22933805 Chy06g00167 Chy-Chr6:1087735 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71582 PF00069 Pkinase 2.10E-26 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01644 - - csv:101202751 1560.81