Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01657 | ATGGCTTCTCTTCATAGAAAGCAAGCTAACCATGCCTGCTTTCTTCTTCTTCTCTTCCTCTTTATCTCTCTCCCATCTCTCACTGTCTCTGTCTCGGAAGCCGAAGTTTCGTATATTACTCAACGTCAACTATTGACTCTAAAAGAACACGATGAACTCCCCGATGACTTCAAATACAAACTTGACATTCCTGACACTTTTTCAAATGAGAGGTTGAAGAAAGCTTATGTAGCCCTTCAAGCATGGAAATTAGCTGTTTATTCTGACCCACAAAACATGACCGCCAATTGGGTTGGCGCCGATGTTTGTTCTTACAACGGCGTCTTCTGTGCTCCGGCGCTTGATAACCCGAAAATTGAGGTTGTGGCTGGCATTGATTTGAACGATGGTGACATTGCAGGGTACTTGCCTCCGGAACTTGGGCTTTTGACCGATTTGGCTCTCTTCCATATTAACTCTAACAGGTTTTGTGGGATCATTCCTTCTAGTTTCTCCAAGCTTGTACTCATGTTTGAGTTTGATGTCAGCAACAACCGCTTCGTTGGCCACTTTCCTCTCGTTGTCCTCGAATGGCCGACTGCGAAGTACCTCGATCTCAGGTACAATGACTTCGAAGGAGAAATCCCCTCCACACTTTTCATCAAGGAGTTCGACGCCATCTTCCTAAACAACAACAGATTCAATTCTCTAATCCCTGAAACCATTGGAAACTCAACCGTCTCTGTTGTCTCCTTCGCCAACAACGAATTTCACGGCTGCATTCCTAACACCATTGGCCAAATGTCTAACCTCAACCAAATTCTCTTCATCGGCAACAAACTCGGAGGCTGTTTTCCACCTGAGATCGGAAACCTCGTCAATCTCACAGTTTTGGATGTTAGCAACAATGGCTTCGTAGGCCAATTGCCGGAATCATTTTCTGGCCTCCAAAATTTGGAGATTATGGACGTTAGCAACAATGAATTGAGGGGCTCTGTCTCTGGAGGCCTTTGCAAGTTGCCTAAATTGGCTAACTTCACTTTCTCCTTTAATTACTTTGATGGGAAAGATGCATCGTGTGTTGCATCTAAAGGATTAGAGAAGCTCTTTGATGATGGCCAAAATTGTATAGCAAATCAACCAGGGCAAAAAGATGCAAACAAATGTAGCACTGTCTTGAAGAAATCAGTGGAATGTGGCAATTGTGGTGGTGGGTCGAGTTCTCCTGGTGTGCCGTCGACTCCTGAGGATCCATATGATCAATCTCCATCACCAAGATATAGATCTCCACCACCTTCAGTTGTGACTCCACCATCTCCAAGTGAGACTTCTGTTCCATCATCACCACCTACCACTGAAACACCTACTTCATCTCCAGTTGAATCTCCCCTACCACCAGCCTATTCCTCTCCTCCACCACCGGTTCATTCCCCACCACCCCCTGTTCATTCACCACCACCACCGATCTCCTCTCCTCCACCTCCTGTTCACTCACCACCACCACCAGTTCACTCTCCACCTCCACCGGTTCACTCTCCACCACCCCCTGTCCACTCTCCACCACCCCCCGTCCACTCCCCACCACCACCGGTTCACTCTCCACCTCCCCCCGTCCACTCTCCACCACCTCCCGTCCATTCCCCACCACCACCTGTCTACTCTCCACCTCCACCAGTCTATTCTCCACCACCACCTGTCTACTCACCTCCACCACCACCTGTTTACTCCCCACCGCCACCAGTTCAATCTCCACCACCTCCGACTGCATCTCCTCCTCCTCCCGATTCTTCACCACCACCGTCATTTGAAGATGTGATTCTCCCACCAAATATCGGCTTCGAATATGCATCACCGCCTCCACCCCTGTTTCCCGGTTATTGA | 1860 | 48.44 | MASLHRKQANHACFLLLLFLFISLPSLTVSVSEAEVSYITQRQLLTLKEHDELPDDFKYKLDIPDTFSNERLKKAYVALQAWKLAVYSDPQNMTANWVGADVCSYNGVFCAPALDNPKIEVVAGIDLNDGDIAGYLPPELGLLTDLALFHINSNRFCGIIPSSFSKLVLMFEFDVSNNRFVGHFPLVVLEWPTAKYLDLRYNDFEGEIPSTLFIKEFDAIFLNNNRFNSLIPETIGNSTVSVVSFANNEFHGCIPNTIGQMSNLNQILFIGNKLGGCFPPEIGNLVNLTVLDVSNNGFVGQLPESFSGLQNLEIMDVSNNELRGSVSGGLCKLPKLANFTFSFNYFDGKDASCVASKGLEKLFDDGQNCIANQPGQKDANKCSTVLKKSVECGNCGGGSSSPGVPSTPEDPYDQSPSPRYRSPPPSVVTPPSPSETSVPSSPPTTETPTSSPVESPLPPAYSSPPPPVHSPPPPVHSPPPPISSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVYSPPPPVYSPPPPPVYSPPPPVQSPPPPTASPPPPDSSPPPSFEDVILPPNIGFEYASPPPPLFPGY* | 620 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 23038201 | 23040060 | - | Chy11G202370.1 | Chy11g01657 | 237418 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01657 | 619 | MobiDBLite | consensus disorder prediction | 452 | 548 | - | - | |
Chy11g01657 | 619 | MobiDBLite | consensus disorder prediction | 564 | 598 | - | - | |
Chy11g01657 | 619 | Gene3D | Ribonuclease Inhibitor | 72 | 237 | IPR032675 | - | |
Chy11g01657 | 619 | Pfam | Leucine rich repeat | 287 | 344 | IPR001611 | GO:0005515 | |
Chy11g01657 | 619 | MobiDBLite | consensus disorder prediction | 564 | 619 | - | - | |
Chy11g01657 | 619 | MobiDBLite | consensus disorder prediction | 409 | 438 | - | - | |
Chy11g01657 | 619 | SUPERFAMILY | L domain-like | 85 | 366 | - | - | |
Chy11g01657 | 619 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 | 520 | 614 | - | - | |
Chy11g01657 | 619 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 | 456 | 532 | - | - | |
Chy11g01657 | 619 | PANTHER | POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 | 10 | 406 | - | - | |
Chy11g01657 | 619 | MobiDBLite | consensus disorder prediction | 395 | 548 | - | - | |
Chy11g01657 | 619 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 520 | 614 | - | - | |
Chy11g01657 | 619 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 456 | 532 | - | - | |
Chy11g01657 | 619 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 10 | 406 | - | - | |
Chy11g01657 | 619 | Gene3D | Ribonuclease Inhibitor | 238 | 357 | IPR032675 | - | |
Chy11g01657 | 619 | PRINTS | Proline rich extensin signature | 437 | 453 | - | - | |
Chy11g01657 | 619 | PRINTS | Proline rich extensin signature | 455 | 472 | - | - | |
Chy11g01657 | 619 | PRINTS | Proline rich extensin signature | 474 | 499 | - | - | |
Chy11g01657 | 619 | PRINTS | Proline rich extensin signature | 413 | 434 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g00552 | Chy-Chr6:3765008 | Chy11g01657 | Chy-Chr11:23038201 | 3.27E-124 | dispersed | |
Chy11g01657 | Chy-Chr11:23038201 | Chy02g01907 | Chy-Chr2:22139730 | 3.47E-140 | dispersed | |
Chy11g01657 | Chy-Chr11:23038201 | Chy02g01174 | Chy-Chr2:8415487 | 1.43E-85 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01657 | - | - | csv:101221838 | 758.444 |