Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01657 ATGGCTTCTCTTCATAGAAAGCAAGCTAACCATGCCTGCTTTCTTCTTCTTCTCTTCCTCTTTATCTCTCTCCCATCTCTCACTGTCTCTGTCTCGGAAGCCGAAGTTTCGTATATTACTCAACGTCAACTATTGACTCTAAAAGAACACGATGAACTCCCCGATGACTTCAAATACAAACTTGACATTCCTGACACTTTTTCAAATGAGAGGTTGAAGAAAGCTTATGTAGCCCTTCAAGCATGGAAATTAGCTGTTTATTCTGACCCACAAAACATGACCGCCAATTGGGTTGGCGCCGATGTTTGTTCTTACAACGGCGTCTTCTGTGCTCCGGCGCTTGATAACCCGAAAATTGAGGTTGTGGCTGGCATTGATTTGAACGATGGTGACATTGCAGGGTACTTGCCTCCGGAACTTGGGCTTTTGACCGATTTGGCTCTCTTCCATATTAACTCTAACAGGTTTTGTGGGATCATTCCTTCTAGTTTCTCCAAGCTTGTACTCATGTTTGAGTTTGATGTCAGCAACAACCGCTTCGTTGGCCACTTTCCTCTCGTTGTCCTCGAATGGCCGACTGCGAAGTACCTCGATCTCAGGTACAATGACTTCGAAGGAGAAATCCCCTCCACACTTTTCATCAAGGAGTTCGACGCCATCTTCCTAAACAACAACAGATTCAATTCTCTAATCCCTGAAACCATTGGAAACTCAACCGTCTCTGTTGTCTCCTTCGCCAACAACGAATTTCACGGCTGCATTCCTAACACCATTGGCCAAATGTCTAACCTCAACCAAATTCTCTTCATCGGCAACAAACTCGGAGGCTGTTTTCCACCTGAGATCGGAAACCTCGTCAATCTCACAGTTTTGGATGTTAGCAACAATGGCTTCGTAGGCCAATTGCCGGAATCATTTTCTGGCCTCCAAAATTTGGAGATTATGGACGTTAGCAACAATGAATTGAGGGGCTCTGTCTCTGGAGGCCTTTGCAAGTTGCCTAAATTGGCTAACTTCACTTTCTCCTTTAATTACTTTGATGGGAAAGATGCATCGTGTGTTGCATCTAAAGGATTAGAGAAGCTCTTTGATGATGGCCAAAATTGTATAGCAAATCAACCAGGGCAAAAAGATGCAAACAAATGTAGCACTGTCTTGAAGAAATCAGTGGAATGTGGCAATTGTGGTGGTGGGTCGAGTTCTCCTGGTGTGCCGTCGACTCCTGAGGATCCATATGATCAATCTCCATCACCAAGATATAGATCTCCACCACCTTCAGTTGTGACTCCACCATCTCCAAGTGAGACTTCTGTTCCATCATCACCACCTACCACTGAAACACCTACTTCATCTCCAGTTGAATCTCCCCTACCACCAGCCTATTCCTCTCCTCCACCACCGGTTCATTCCCCACCACCCCCTGTTCATTCACCACCACCACCGATCTCCTCTCCTCCACCTCCTGTTCACTCACCACCACCACCAGTTCACTCTCCACCTCCACCGGTTCACTCTCCACCACCCCCTGTCCACTCTCCACCACCCCCCGTCCACTCCCCACCACCACCGGTTCACTCTCCACCTCCCCCCGTCCACTCTCCACCACCTCCCGTCCATTCCCCACCACCACCTGTCTACTCTCCACCTCCACCAGTCTATTCTCCACCACCACCTGTCTACTCACCTCCACCACCACCTGTTTACTCCCCACCGCCACCAGTTCAATCTCCACCACCTCCGACTGCATCTCCTCCTCCTCCCGATTCTTCACCACCACCGTCATTTGAAGATGTGATTCTCCCACCAAATATCGGCTTCGAATATGCATCACCGCCTCCACCCCTGTTTCCCGGTTATTGA 1860 48.44 MASLHRKQANHACFLLLLFLFISLPSLTVSVSEAEVSYITQRQLLTLKEHDELPDDFKYKLDIPDTFSNERLKKAYVALQAWKLAVYSDPQNMTANWVGADVCSYNGVFCAPALDNPKIEVVAGIDLNDGDIAGYLPPELGLLTDLALFHINSNRFCGIIPSSFSKLVLMFEFDVSNNRFVGHFPLVVLEWPTAKYLDLRYNDFEGEIPSTLFIKEFDAIFLNNNRFNSLIPETIGNSTVSVVSFANNEFHGCIPNTIGQMSNLNQILFIGNKLGGCFPPEIGNLVNLTVLDVSNNGFVGQLPESFSGLQNLEIMDVSNNELRGSVSGGLCKLPKLANFTFSFNYFDGKDASCVASKGLEKLFDDGQNCIANQPGQKDANKCSTVLKKSVECGNCGGGSSSPGVPSTPEDPYDQSPSPRYRSPPPSVVTPPSPSETSVPSSPPTTETPTSSPVESPLPPAYSSPPPPVHSPPPPVHSPPPPISSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVYSPPPPVYSPPPPPVYSPPPPVQSPPPPTASPPPPDSSPPPSFEDVILPPNIGFEYASPPPPLFPGY* 620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 23038201 23040060 - Chy11G202370.1 Chy11g01657 237418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01657 619 MobiDBLite consensus disorder prediction 452 548 - -
Chy11g01657 619 MobiDBLite consensus disorder prediction 564 598 - -
Chy11g01657 619 Gene3D Ribonuclease Inhibitor 72 237 IPR032675 -
Chy11g01657 619 Pfam Leucine rich repeat 287 344 IPR001611 GO:0005515
Chy11g01657 619 MobiDBLite consensus disorder prediction 564 619 - -
Chy11g01657 619 MobiDBLite consensus disorder prediction 409 438 - -
Chy11g01657 619 SUPERFAMILY L domain-like 85 366 - -
Chy11g01657 619 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 520 614 - -
Chy11g01657 619 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 456 532 - -
Chy11g01657 619 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1 10 406 - -
Chy11g01657 619 MobiDBLite consensus disorder prediction 395 548 - -
Chy11g01657 619 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 520 614 - -
Chy11g01657 619 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 456 532 - -
Chy11g01657 619 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 10 406 - -
Chy11g01657 619 Gene3D Ribonuclease Inhibitor 238 357 IPR032675 -
Chy11g01657 619 PRINTS Proline rich extensin signature 437 453 - -
Chy11g01657 619 PRINTS Proline rich extensin signature 455 472 - -
Chy11g01657 619 PRINTS Proline rich extensin signature 474 499 - -
Chy11g01657 619 PRINTS Proline rich extensin signature 413 434 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g00552 Chy-Chr6:3765008 Chy11g01657 Chy-Chr11:23038201 3.27E-124 dispersed
Chy11g01657 Chy-Chr11:23038201 Chy02g01907 Chy-Chr2:22139730 3.47E-140 dispersed
Chy11g01657 Chy-Chr11:23038201 Chy02g01174 Chy-Chr2:8415487 1.43E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01657 - - csv:101221838 758.444