Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01662 ATGGAAAACAGCTCTTTTTATCAGAACATCAGGGGAGAGCCCACTCATGGTGGTCAATACATTCAATACAATGTGTATGGGAATCTGTTTGAAGTTTCTAGGAAGTATACTCCACCCATCAGGCCAGTTGGGAGAGGAGCTTATGGAATTGTGTGTGCTGCTTTGAACTCAGAAACAAATGAAGATGTTGCAATTAAGAAGGTTGGCAAGGCATTTGACAATAGAATTGATGCTAAAAGGACCTTACGAGAAATCAAGCTTCTTCGACACATGGATCATGAAAATATTATTGCTCTCAGAGATATTATAAGACCTCCCCAGAAGGAGAATTTCAATGATGTATACCTTGTTTATGAATTGATGGACACAGATCTAAATCAGATTATACGGTCCAACCAATCATTGACTGATGACCATTGCCGGTACTTTCTGTATCAGTTGTTACGAGGGCTAAAATATGTGCATTCTGCTAATGTTCTACACCGTGATTTGAAACCAAGCAATTTGTTCCTCAATGCAAATTGTGACTTAAAAATTGGAGACTTTGGCCTTGCAAGGACAACTTCTGAAACTGATTTTATGACCGAGTATGTTGTTACTCGGTGGTATCGTGCACCCGAATTGCTCCTTAATTGTTCAGAATACACAGGAGCAATAGATATTTGGTCTGTTGGTTGTATACTTGGTGAAATTATGCACAGACAACCATTGTTTCCAGGAAAAGACTATGTTCATCAGCTAAAACTTATCACTGAGCTCATTGGGTCACCAGATGAATCGAGTCTTGGATTCTTACGAAGTGACAATCCAAGAAGATATTTTAGGCATCTTCCTCACTTCCCCAAGCAACAGTTTTCCTCTAGATTTCCCACCATGTCTCCTGCTGCTATTGACTTGCTTGAGAAGATGCTAGTCTTTGATCCTACTAAGCGCATTACAGTTGATGAGGCGTTGTGCCATCCATATTTAGCACCTCTTCATGATATCAATGAGGAGCCTGTATGTCCAAGGCCTTTCAGTTTCGATTTCGAGCAACCAACGTACACCGAAGAAAACATCAAGGAACTTGTATGGAGGGAATCCTTGAGGTTCAACCCCGATCCCGCTTTTTGA 1113 40.7 MENSSFYQNIRGEPTHGGQYIQYNVYGNLFEVSRKYTPPIRPVGRGAYGIVCAALNSETNEDVAIKKVGKAFDNRIDAKRTLREIKLLRHMDHENIIALRDIIRPPQKENFNDVYLVYELMDTDLNQIIRSNQSLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLFLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTGAIDIWSVGCILGEIMHRQPLFPGKDYVHQLKLITELIGSPDESSLGFLRSDNPRRYFRHLPHFPKQQFSSRFPTMSPAAIDLLEKMLVFDPTKRITVDEALCHPYLAPLHDINEEPVCPRPFSFDFEQPTYTEENIKELVWRESLRFNPDPAF* 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 23088308 23092369 - Chy11G202420.1 Chy11g01662 237423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01662 370 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 369 - -
Chy11g01662 370 Pfam Protein kinase domain 41 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01662 370 ProSitePatterns Protein kinases ATP-binding region signature. 43 67 IPR017441 GO:0005524
Chy11g01662 370 SUPERFAMILY Protein kinase-like (PK-like) 40 330 IPR011009 -
Chy11g01662 370 ProSiteProfiles Protein kinase domain profile. 37 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01662 370 ProSitePatterns MAP kinase signature. 72 175 IPR003527 GO:0004707|GO:0005524|GO:0006468
Chy11g01662 370 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED 14 369 - -
Chy11g01662 370 CDD STKc_TEY_MAPK 30 366 - -
Chy11g01662 370 Gene3D Phosphorylase Kinase; domain 1 20 360 - -
Chy11g01662 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Chy11g01662 370 Gene3D Transferase(Phosphotransferase) domain 1 121 350 - -
Chy11g01662 370 SMART serkin_6 37 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01662 Chy-Chr11:23088308 Chy12g00122 Chy-Chr12:1329932 8.75E-162 dispersed
Chy03g00689 Chy-Chr3:9434641 Chy11g01662 Chy-Chr11:23088308 0 transposed
Chy03g01433 Chy-Chr3:17007158 Chy11g01662 Chy-Chr11:23088308 1.76E-153 transposed
Chy04g01445 Chy-Chr4:21093460 Chy11g01662 Chy-Chr11:23088308 3.84E-52 transposed
Chy04g02123 Chy-Chr4:26514044 Chy11g01662 Chy-Chr11:23088308 2.04E-24 transposed
Chy07g01255 Chy-Chr7:17267359 Chy11g01662 Chy-Chr11:23088308 3.50E-143 transposed
Chy11g02015 Chy-Chr11:26003592 Chy11g01662 Chy-Chr11:23088308 1.19E-52 transposed
Chy12g00121 Chy-Chr12:1329285 Chy11g01662 Chy-Chr11:23088308 1.63E-15 transposed
Chy12g00894 Chy-Chr12:14319652 Chy11g01662 Chy-Chr11:23088308 0 transposed
Chy11g01662 Chy-Chr11:23088308 Chy09g01256 Chy-Chr9:14581312 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71583 PF00069 Pkinase 4.80E-71 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01662 K20600 - csv:101215189 762.681