Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01662 | ATGGAAAACAGCTCTTTTTATCAGAACATCAGGGGAGAGCCCACTCATGGTGGTCAATACATTCAATACAATGTGTATGGGAATCTGTTTGAAGTTTCTAGGAAGTATACTCCACCCATCAGGCCAGTTGGGAGAGGAGCTTATGGAATTGTGTGTGCTGCTTTGAACTCAGAAACAAATGAAGATGTTGCAATTAAGAAGGTTGGCAAGGCATTTGACAATAGAATTGATGCTAAAAGGACCTTACGAGAAATCAAGCTTCTTCGACACATGGATCATGAAAATATTATTGCTCTCAGAGATATTATAAGACCTCCCCAGAAGGAGAATTTCAATGATGTATACCTTGTTTATGAATTGATGGACACAGATCTAAATCAGATTATACGGTCCAACCAATCATTGACTGATGACCATTGCCGGTACTTTCTGTATCAGTTGTTACGAGGGCTAAAATATGTGCATTCTGCTAATGTTCTACACCGTGATTTGAAACCAAGCAATTTGTTCCTCAATGCAAATTGTGACTTAAAAATTGGAGACTTTGGCCTTGCAAGGACAACTTCTGAAACTGATTTTATGACCGAGTATGTTGTTACTCGGTGGTATCGTGCACCCGAATTGCTCCTTAATTGTTCAGAATACACAGGAGCAATAGATATTTGGTCTGTTGGTTGTATACTTGGTGAAATTATGCACAGACAACCATTGTTTCCAGGAAAAGACTATGTTCATCAGCTAAAACTTATCACTGAGCTCATTGGGTCACCAGATGAATCGAGTCTTGGATTCTTACGAAGTGACAATCCAAGAAGATATTTTAGGCATCTTCCTCACTTCCCCAAGCAACAGTTTTCCTCTAGATTTCCCACCATGTCTCCTGCTGCTATTGACTTGCTTGAGAAGATGCTAGTCTTTGATCCTACTAAGCGCATTACAGTTGATGAGGCGTTGTGCCATCCATATTTAGCACCTCTTCATGATATCAATGAGGAGCCTGTATGTCCAAGGCCTTTCAGTTTCGATTTCGAGCAACCAACGTACACCGAAGAAAACATCAAGGAACTTGTATGGAGGGAATCCTTGAGGTTCAACCCCGATCCCGCTTTTTGA | 1113 | 40.7 | MENSSFYQNIRGEPTHGGQYIQYNVYGNLFEVSRKYTPPIRPVGRGAYGIVCAALNSETNEDVAIKKVGKAFDNRIDAKRTLREIKLLRHMDHENIIALRDIIRPPQKENFNDVYLVYELMDTDLNQIIRSNQSLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLFLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTGAIDIWSVGCILGEIMHRQPLFPGKDYVHQLKLITELIGSPDESSLGFLRSDNPRRYFRHLPHFPKQQFSSRFPTMSPAAIDLLEKMLVFDPTKRITVDEALCHPYLAPLHDINEEPVCPRPFSFDFEQPTYTEENIKELVWRESLRFNPDPAF* | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 23088308 | 23092369 | - | Chy11G202420.1 | Chy11g01662 | 237423 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01662 | 370 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 14 | 369 | - | - | |
Chy11g01662 | 370 | Pfam | Protein kinase domain | 41 | 323 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01662 | 370 | ProSitePatterns | Protein kinases ATP-binding region signature. | 43 | 67 | IPR017441 | GO:0005524 | |
Chy11g01662 | 370 | SUPERFAMILY | Protein kinase-like (PK-like) | 40 | 330 | IPR011009 | - | |
Chy11g01662 | 370 | ProSiteProfiles | Protein kinase domain profile. | 37 | 323 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01662 | 370 | ProSitePatterns | MAP kinase signature. | 72 | 175 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Chy11g01662 | 370 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED | 14 | 369 | - | - | |
Chy11g01662 | 370 | CDD | STKc_TEY_MAPK | 30 | 366 | - | - | |
Chy11g01662 | 370 | Gene3D | Phosphorylase Kinase; domain 1 | 20 | 360 | - | - | |
Chy11g01662 | 370 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 159 | 171 | IPR008271 | GO:0004672|GO:0006468 | |
Chy11g01662 | 370 | Gene3D | Transferase(Phosphotransferase) domain 1 | 121 | 350 | - | - | |
Chy11g01662 | 370 | SMART | serkin_6 | 37 | 323 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy11g01662 | Chy-Chr11:23088308 | Chy12g00122 | Chy-Chr12:1329932 | 8.75E-162 | dispersed | |
Chy03g00689 | Chy-Chr3:9434641 | Chy11g01662 | Chy-Chr11:23088308 | 0 | transposed | |
Chy03g01433 | Chy-Chr3:17007158 | Chy11g01662 | Chy-Chr11:23088308 | 1.76E-153 | transposed | |
Chy04g01445 | Chy-Chr4:21093460 | Chy11g01662 | Chy-Chr11:23088308 | 3.84E-52 | transposed | |
Chy04g02123 | Chy-Chr4:26514044 | Chy11g01662 | Chy-Chr11:23088308 | 2.04E-24 | transposed | |
Chy07g01255 | Chy-Chr7:17267359 | Chy11g01662 | Chy-Chr11:23088308 | 3.50E-143 | transposed | |
Chy11g02015 | Chy-Chr11:26003592 | Chy11g01662 | Chy-Chr11:23088308 | 1.19E-52 | transposed | |
Chy12g00121 | Chy-Chr12:1329285 | Chy11g01662 | Chy-Chr11:23088308 | 1.63E-15 | transposed | |
Chy12g00894 | Chy-Chr12:14319652 | Chy11g01662 | Chy-Chr11:23088308 | 0 | transposed | |
Chy11g01662 | Chy-Chr11:23088308 | Chy09g01256 | Chy-Chr9:14581312 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71583 | PF00069 | Pkinase | 4.80E-71 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01662 | K20600 | - | csv:101215189 | 762.681 |