Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01727 | ATGGGGAAGAAAGGAGGTAGCTCATGGTTGACTGCTGTCAAAAGGGCTTTCAGATCTCCCACTAAAGATGACGACGAAAAGAGGAGAGACAAACGTCGATGGATTTTTAGAAAACCAACTAATCAGCAGCCGGAGCCACTTGCTGCCCACCAACCGCCGTCTAAGCCGGCAGCGGCTCTACCCATTGACCCTGTAGCTTTGGAAAACCAGAAACATGCCCTTGCTGTGGCTGAAGCTGCCATGGTTGCTGCTAGAGCGTCTGCACAAGCTGTCCACCTTACTCGCCCTGCTCGGCCTGGGTTGGATCGACATCGTCTCGCCGCCATTGTGATTCAAACGGCCTTTAGAGGATATCTGGCAAGGAGGGCTCTGCGGGCATTGAAGGGGTTAGTGAAGTTGCAAGCATTAGTGAGAGGACACAATGTGAGGAAGCAAGCAAAGACTACACTGCAATGTATGAAAGCATTAGTGAGAGTACAGGAAAAAGTGCTGGATCACCGGATGCGACTCTCCCTCGAGGGCAGCCGACGGTCGACCTTTAGTGACACCAACAGCGTCTACGAATCTCGCTATCCTCAAGACGTGTCTGAAAGGAAGACTATTAAGTGTGTGTCAAGAGAAGGAAGCAGCATTACAGAGGATTGGGATGAACGTGCTCACACAGTTGACGAAGTTAAGGCAATGTTACAACTTAGAAGAGATGCTGCTTTGAATCGTGACAACATTTTATCTCATTCCTTTTCTCAGCAGATATGGAGGACTGGAAAGAGCCCATCAATAGGAAATCAAACAGAGCTTGAAGAAGGACAAAAATGGCTAGACCAATGGATGGCAAAGAAGCCATGGGAGAGCAGGGCAAGAGCTTCCACAGATCACAGACCACAGCCCCTTAAAACCCTTGAAATCGACACCTCTCGACCCTACTCCTACTTATCTCCCAACAATCTCCACACAACCAATTATCAACCTCAATCCCAAAGATCAAACTCGCTTTCCTCCTCATCCCCACTCCACAGAGCCCATCAACACCAATTCTCCATCACCCCATCCCCGTCAAAATCTCGACCGGTCCCTCAAGTTCGGTCGGCGAGTCCTCGCTACAGCAGAGAAGATAGAAATCAAATCAACCATCACCACGTTACATCCCAAACACCAAGCTTGAAGTCAAAATATCAACATCAAAAAGGGGGTAGTGGTGGTGGGACTTCAATGCCAAATTACATGGCAGCAACAGAGTCAGCCAAGGCACGAGTGCGGTCACAAAGTGCACCAAGGCAAAGGCCAGCAACGCCTGAGAGGGAACGAGTTGGTGGGACTGCGAGGAAACGGCTATCGTTTCCAGTACCGCCGGATCCTTACGGTAGAATAGCAGGGGGTTCTGTTTATGGGAATAGCATGAAGAGTCCAAGCTTTAAGAGTGCTTGTGGAAGGTATGGTGGGTTGGAGGAACAGTCTAACTATTCTTCTTGCTATACAGAAAGCCATGGAGGAGAGGTTTCTCCATCTTCAACCACTGATCTTAGAAGGTGGTTGAGATGA | 1539 | 49.19 | MGKKGGSSWLTAVKRAFRSPTKDDDEKRRDKRRWIFRKPTNQQPEPLAAHQPPSKPAAALPIDPVALENQKHALAVAEAAMVAARASAQAVHLTRPARPGLDRHRLAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKTTLQCMKALVRVQEKVLDHRMRLSLEGSRRSTFSDTNSVYESRYPQDVSERKTIKCVSREGSSITEDWDERAHTVDEVKAMLQLRRDAALNRDNILSHSFSQQIWRTGKSPSIGNQTELEEGQKWLDQWMAKKPWESRARASTDHRPQPLKTLEIDTSRPYSYLSPNNLHTTNYQPQSQRSNSLSSSSPLHRAHQHQFSITPSPSKSRPVPQVRSASPRYSREDRNQINHHHVTSQTPSLKSKYQHQKGGSGGGTSMPNYMAATESAKARVRSQSAPRQRPATPERERVGGTARKRLSFPVPPDPYGRIAGGSVYGNSMKSPSFKSACGRYGGLEEQSNYSSCYTESHGGEVSPSSTTDLRRWLR* | 513 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 23681797 | 23684966 | - | Chy11G203070.1 | Chy11g01727 | 237488 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01727 | 512 | MobiDBLite | consensus disorder prediction | 486 | 512 | - | - | |
Chy11g01727 | 512 | ProSiteProfiles | IQ motif profile. | 128 | 155 | IPR000048 | GO:0005515 | |
Chy11g01727 | 512 | SMART | iq_5 | 126 | 147 | IPR000048 | GO:0005515 | |
Chy11g01727 | 512 | SMART | iq_5 | 103 | 125 | IPR000048 | GO:0005515 | |
Chy11g01727 | 512 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 89 | 149 | IPR027417 | - | |
Chy11g01727 | 512 | Pfam | IQ calmodulin-binding motif | 131 | 147 | IPR000048 | GO:0005515 | |
Chy11g01727 | 512 | Pfam | IQ calmodulin-binding motif | 107 | 125 | IPR000048 | GO:0005515 | |
Chy11g01727 | 512 | Pfam | Protein of unknown function (DUF4005) | 364 | 459 | IPR025064 | - | |
Chy11g01727 | 512 | Gene3D | - | 101 | 156 | - | - | |
Chy11g01727 | 512 | PANTHER | PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 | 1 | 512 | - | - | |
Chy11g01727 | 512 | MobiDBLite | consensus disorder prediction | 378 | 427 | - | - | |
Chy11g01727 | 512 | MobiDBLite | consensus disorder prediction | 283 | 299 | - | - | |
Chy11g01727 | 512 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
Chy11g01727 | 512 | MobiDBLite | consensus disorder prediction | 17 | 38 | - | - | |
Chy11g01727 | 512 | ProSiteProfiles | IQ motif profile. | 104 | 132 | IPR000048 | GO:0005515 | |
Chy11g01727 | 512 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 512 | - | - | |
Chy11g01727 | 512 | MobiDBLite | consensus disorder prediction | 305 | 361 | - | - | |
Chy11g01727 | 512 | MobiDBLite | consensus disorder prediction | 283 | 451 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy06g00025 | Chy-Chr6:168604 | Chy11g01727 | Chy-Chr11:23681797 | 6.75E-145 | dispersed | |
Chy06g00922 | Chy-Chr6:6776475 | Chy11g01727 | Chy-Chr11:23681797 | 4.32E-25 | dispersed | |
Chy10g01339 | Chy-Chr10:17688916 | Chy11g01727 | Chy-Chr11:23681797 | 3.62E-27 | dispersed | |
Chy11g01727 | Chy-Chr11:23681797 | Chy04g02086 | Chy-Chr4:26265661 | 3.81E-26 | dispersed | |
Chy11g01727 | Chy-Chr11:23681797 | Chy09g00721 | Chy-Chr9:9637359 | 9.80E-34 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01727 | - | - | csv:101207978 | 967.607 |