Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01776 ATGGATTTATCTTTAAGAATGGAAAGCAATGGTTTTGCTGATGTTGTAGAAAGAGAACACATGTTTGATAAAGTTGTTACTCCGAGTGATGTTGGAAAATTAAACCGTTTAGTTATTCCAAAACAACATGCTGAGAAGTACTTCCCTTTAGACTCATCCACCAACGACAAAGGCCTCATCTTAAACTTTGAAGACCGTCATGGAAAGCCTTGGCGTTTTCGTTACTCTTATTGGAATAGTAGTCAAAGCTATGTCATGACTAAAGGTTGGAGTCGTTTTGTTAAGGAGAAAAAACTCGATGCCGGCGATATCGTTTCTTTCCACCGTGCTCTCCCAAGTCATTCCGTCAACGACCGTCTTTTTATCGACTGGCGTCGTCGTCGCTCCGACGCTCCTACTCCTCATCACCATCACCACCATTTCTCTAACCCTTTTCTCCTCCGTTGGGGCACTACTGCTCGTCACTTGCCACCACCACCGCCTCCGCCACGACGAACAACTCACCACCAACACCATCTTTACCCTAATTACGGGTTTGAAATCCCTAATTTTGGGATGTCTAATATTAATAATTCTTCCATGTATTATTTTCGACCGCCGTCCTCGTCTTCTTCTCTTTATAGGATGGGAAATGGGGATGAGATTGTTGTTAATAATCAAGGATGTTCTTCTATGGGGATTATTAACAAACCTGGGTCTGGTGCCGCAAAACGGTTGAGACTCTTTGGAGTGAATATGGAGTGTGCTTCACCGGATGGAGAAGGAGGAGGAGGAGGAGAGGATGTGTCGAACGGTGGTGTTCCGAGAAGAGGGAAAGAACCCTTGTCGTTGAATTGGGATTTTCTTTAA 849 44.17 MDLSLRMESNGFADVVEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNDKGLILNFEDRHGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFHRALPSHSVNDRLFIDWRRRRSDAPTPHHHHHHFSNPFLLRWGTTARHLPPPPPPPRRTTHHQHHLYPNYGFEIPNFGMSNINNSSMYYFRPPSSSSSLYRMGNGDEIVVNNQGCSSMGIINKPGSGAAKRLRLFGVNMECASPDGEGGGGGEDVSNGGVPRRGKEPLSLNWDFL* 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 24118846 24119694 - Chy11G203560.1 Chy11g01776 237537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01776 282 SUPERFAMILY DNA-binding pseudobarrel domain 19 110 IPR015300 -
Chy11g01776 282 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 12 250 IPR044800 GO:0003700
Chy11g01776 282 Gene3D - 15 141 IPR015300 -
Chy11g01776 282 Pfam B3 DNA binding domain 22 127 IPR003340 GO:0003677
Chy11g01776 282 ProSiteProfiles B3 DNA-binding domain profile. 22 128 IPR003340 GO:0003677
Chy11g01776 282 MobiDBLite consensus disorder prediction 250 282 - -
Chy11g01776 282 SMART B3_2 22 128 IPR003340 GO:0003677
Chy11g01776 282 CDD B3_DNA 20 109 IPR003340 GO:0003677
Chy11g01776 282 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 12 250 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01900 Chy-Chr4:25061405 Chy11g01776 Chy-Chr11:24118846 1.82E-48 dispersed
Chy04g02316 Chy-Chr4:27572427 Chy11g01776 Chy-Chr11:24118846 2.47E-14 dispersed
Chy07g01218 Chy-Chr7:16986631 Chy11g01776 Chy-Chr11:24118846 1.38E-59 dispersed
Chy10g01117 Chy-Chr10:16208218 Chy11g01776 Chy-Chr11:24118846 9.25E-48 dispersed
Chy11g01776 Chy-Chr11:24118846 Chy11g00813 Chy-Chr11:11664482 1.35E-12 dispersed
Chy11g01776 Chy-Chr11:24118846 Chy09g01354 Chy-Chr9:15378053 1.84E-64 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18786 PF02362 B3 2.50E-28 CL0405 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01776 - - csv:101221141 551.977