Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01796 ATGGAACCCTATTGTCCTCACAGAAAATCTTCCATCTCAACCAATTCCACTACCACTCTCCCACTCTACCGCTCTGCTCCTCCTCTTGAAGTCAGGCTTGAAGATTTTGAGCTTTATGCCATAGATCGTCTTCGAGTTCTTAAAGGGATATCTGATGGGTTATCTCGAGGAAAGAAATCTGAAGAAATGGAGAAACTGGTTAAAGAATTGTTGAAAACCAACATGAAACATCCACAGGCATCTGAGGTTGTGAACAAGGATATAATATCTCACTTTGTTCTGCGTCTTGTGTATTGCCGAACGGAGGACTTGAGAAAATGGTTTCTTTCTATGGAAACTATGCTATTCCGACACCGTTTTCTTTCTGCAAGTTCTGAATCTCAGAAGCAGGTATTTGCGGAGCTTGGTCTCTCATACAAAGCAATTAGTAATGCAGAATTTGAGGCTGTAAGGGACAAATTGGTTCAAGTTGCTCGGTTGATTGGTCAGCCTGCACCAAGTAGTGATGATATATACTATAAGGTACCATGGGAAGAAGTTCCAGAGCTTGTGGCTGGTCGAAGAGTATTCCTCCATAAAGGATATGCATATATTGCTATTTATCAGGTGGTTTCCCTTGTTGCAACACAATTCCGCAGTTACCTATCAAAGGTCCTAAATCTGACGAACAGGAAATGGACATCTACAATAAGAGAACAAGAGAAAGATCGGTTGACCCCAATAGTAGAAGCCCTTTGCACGAGCTACCTGGGTCCTGACTACTCACAGCCAAGAGAGTATGCTGATATATCAATAAAAGACCTTGACCAAATAGCTAAAAGTTCATTTCCTCTTTGCATGCGACACCTATTTGAAAAGCTGAAAGAAGATCATCATTTGAAGCATGGAGGGAGGATGCAATTAGGTCTCTTTCTCAAGGGTGTTGGTTTGAAGCTTGATGATGCCCTGGCTTTCTGGAGAGCTGAGTTCTCCCAGAGAGTTGGTGCTGAGAGGTTTGACAAAGAATATGCATACAGTATCAGGCATAACTACGGAAAAGAAGGCAAGAGAGTGGATTATTCGCCTTATTCCTGTCAAAAAGTAATCTCATCATCACCTAGTGTTGGAGATCATCATGGATGTCCCTATAGACACTTCAGTGAAGACAACTTAAGAGCAGCTCTTGGTAAAATGGGAGTAAATAACCGGACAATGGAAGATATAATGGACAAAGTGCGAAATAGACATTATCAGTTGGCATGCACCTTGACATTTGAATCGATCCATGGCTCGACATGTGATGCTGGGATTAATCATCCAAACCAGTACTTCATTGATAGTCAAAAGGTCCTGCAATCTAAGGGAGATAACGTAGGTGATTTTAGGGACATCAGCATTGTTTTTGAGTTTGGCCACTATGGCAAGAAATACCATTATGTGAAATGTTTAGAGCCTTGGCTACGAAGGATCGAAGTTAGGGCCATATATCTTGTTTTAGACAAAGTTGTTCACGTAGCATACAATTCAAAGTTGAAACTTAATACCTGCACTTGTTATTTGCAGAATAATTCAACATCCTAG 1560 41.09 MEPYCPHRKSSISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKSEEMEKLVKELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRFLSASSESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDDIYYKVPWEEVPELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKVLNLTNRKWTSTIREQEKDRLTPIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRVDYSPYSCQKVISSSPSVGDHHGCPYRHFSEDNLRAALGKMGVNNRTMEDIMDKVRNRHYQLACTLTFESIHGSTCDAGINHPNQYFIDSQKVLQSKGDNVGDFRDISIVFEFGHYGKKYHYVKCLEPWLRRIEVRAIYLVLDKVVHVAYNSKLKLNTCTCYLQNNSTS* 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 24339190 24347087 - Chy11G203760.1 Chy11g01796 237557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01796 519 Gene3D - 5 245 - -
Chy11g01796 519 PIRSF DNA_primase_large 5 455 IPR016558 -
Chy11g01796 519 CDD PriL_PriS_Eukaryotic 22 440 IPR016558 -
Chy11g01796 519 PANTHER DNA PRIMASE LARGE SUBUNIT 8 448 IPR007238 GO:0006269
Chy11g01796 519 Pfam Eukaryotic and archaeal DNA primase, large subunit 172 437 IPR007238 GO:0006269
Chy11g01796 519 PANTHER DNA PRIMASE LARGE SUBUNIT 8 448 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01796 Chy-Chr11:24339190 Chy11g01813 Chy-Chr11:24477798 1.61E-08 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01796 K02685 - csv:101217274 862.448