Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01816 | ATGGGTTGTTTTCCTTGTTTCGATTCGAGGGAGGAGGAGAAGTTGAATCCTGAAAAGGAAAGCGATGATGGTAAGCAAGACCATCCAATGGTTCCACCAAACATTGCCAAGTTGCCTTCTGGAATAGACAAACTTAGATCGAAAAATAATGGAGGTTCCAAAAGGGAACAGCAGATTCCCACACCTCTTGTCAATATTTCTGCTCAAACATTCACTTTTCGTGAGCTTGCAACAGCTACGAAGAATTTTAGACCAGAGTGTTTTATTGGGGAAGGAGGATTTGGACGTGTATACAAAGGGCGGCTCGAAAGCACAAGCCAGATTGTTGCTGTTAAACAGTTGGATAGGAATGGTCTTCAAGGCAACAGAGAATTCCTAGTGGAAGTTCTCATGCTTAGCCTTCTGCATCATCCAAATCTGGTGAATCTGATTGGTTACTGTGCTGATGGAGATCAACGACTTCTTGTGTATGAGTTCATGCCTTTGGGATCATTGGAAGACCATCTTCACGAAATTCCACCTGAGAAGGAACCCCTAGATTGGAACACAAGAATGAAAATAGCTGCTGGTGCAGCCAGAGGTTTAGAGTACTTGCATGACAAAGCCAACCCTCCAGTTATTTATAGAGACTTCAAATCTTCCAATATATTACTTGATGAAGGATACCATCCAAAGCTTTCTGATTTTGGCCTTGCAAAGCTTGGCCCTGTTGGAGATAAATCTCATGTTTCCACCAGGGTCATGGGAACATATGGTTACTGTGCTCCCGAATACGCCATGACTGGACAATTAACCGTCAAATCTGATGTTTATAGTTTCGGTGTTGTCTTCTTAGAGTTGATTACTGGAAGGAGAGCCATTGATAGTACCCGACCCCAAGGAGAACAGAATCTTGTTACATGGGCACGCCCGTTTTTTAACGATCGCAGAAGATTCTCAAAATTGGCTGATCCACAGTTGCAGGGGCGATATCCGATGAGAGGTCTCTACCAGGCTTTAGCTGTGGCATCCATGTGTACGCAAGAACAGGCTGCCGCCCGTCCGCTCATTGGAGATGTGGTTACTGCCCTGTCTTATTTAGCAAATCAATCCTACTATCCAAGTTCTCCTCCAGGTACTGCTGCTGCTGGTGCTGCTGGTACTGCTGCTCAGAGAGGTTCTGGTGACCGGGATGAAAGACGGAATAGAGACGAGAAAGGTGGAGGAGGGATGATAAAGAATGAAGAAGGGGGAGCATCTGGACGAAGGTGGCCATTGGATGGTCCCGAGAAGGACGATTCCCCAAGGGAGACTGCTAGGATTTTGAATAGGGATTTAGACAGAGAACGTGCAGTTGCCGAGGCCAAGATGTGGGGAGAAAATTGGCGAGAAAAACGACGGCAGAGCACACAAGGCAGTTTTGATGGATCTAATGGATAA | 1419 | 45.81 | MGCFPCFDSREEEKLNPEKESDDGKQDHPMVPPNIAKLPSGIDKLRSKNNGGSKREQQIPTPLVNISAQTFTFRELATATKNFRPECFIGEGGFGRVYKGRLESTSQIVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHEIPPEKEPLDWNTRMKIAAGAARGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRRAIDSTRPQGEQNLVTWARPFFNDRRRFSKLADPQLQGRYPMRGLYQALAVASMCTQEQAAARPLIGDVVTALSYLANQSYYPSSPPGTAAAGAAGTAAQRGSGDRDERRNRDEKGGGGMIKNEEGGASGRRWPLDGPEKDDSPRETARILNRDLDRERAVAEAKMWGENWREKRRQSTQGSFDGSNG* | 473 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 24519828 | 24524229 | + | Chy11G203960.1 | Chy11g01816 | 237577 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01816 | 472 | MobiDBLite | consensus disorder prediction | 418 | 463 | - | - | |
Chy11g01816 | 472 | Gene3D | Transferase(Phosphotransferase) domain 1 | 160 | 368 | - | - | |
Chy11g01816 | 472 | SUPERFAMILY | Protein kinase-like (PK-like) | 59 | 357 | IPR011009 | - | |
Chy11g01816 | 472 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
Chy11g01816 | 472 | Gene3D | Phosphorylase Kinase; domain 1 | 67 | 159 | - | - | |
Chy11g01816 | 472 | MobiDBLite | consensus disorder prediction | 386 | 404 | - | - | |
Chy11g01816 | 472 | ProSiteProfiles | Protein kinase domain profile. | 83 | 360 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01816 | 472 | MobiDBLite | consensus disorder prediction | 370 | 472 | - | - | |
Chy11g01816 | 472 | MobiDBLite | consensus disorder prediction | 7 | 27 | - | - | |
Chy11g01816 | 472 | CDD | STKc_IRAK | 89 | 357 | - | - | |
Chy11g01816 | 472 | Pfam | Protein kinase domain | 88 | 291 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy11g01816 | 472 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 206 | 218 | IPR008271 | GO:0004672|GO:0006468 | |
Chy11g01816 | 472 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PBS1 | 1 | 467 | - | - | |
Chy11g01816 | 472 | PANTHER | OS07G0668900 PROTEIN | 1 | 467 | - | - | |
Chy11g01816 | 472 | ProSitePatterns | Protein kinases ATP-binding region signature. | 89 | 112 | IPR017441 | GO:0005524 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g01712 | Chy-Chr2:17498110 | Chy11g01816 | Chy-Chr11:24519828 | 3.02E-155 | dispersed | |
Chy04g00919 | Chy-Chr4:13055727 | Chy11g01816 | Chy-Chr11:24519828 | 8.63E-102 | dispersed | |
Chy06g00666 | Chy-Chr6:4553339 | Chy11g01816 | Chy-Chr11:24519828 | 1.74E-50 | dispersed | |
Chy06g01805 | Chy-Chr6:21715067 | Chy11g01816 | Chy-Chr11:24519828 | 1.00E-177 | dispersed | |
Chy07g00395 | Chy-Chr7:3164790 | Chy11g01816 | Chy-Chr11:24519828 | 3.13E-162 | dispersed | |
Chy07g01635 | Chy-Chr7:20364310 | Chy11g01816 | Chy-Chr11:24519828 | 1.84E-104 | dispersed | |
Chy11g01816 | Chy-Chr11:24519828 | Chy12g00891 | Chy-Chr12:14274954 | 2.34E-179 | dispersed | |
Chy11g01816 | Chy-Chr11:24519828 | Chy10g00613 | Chy-Chr10:12711144 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71589 | PF00069 | Pkinase | 2.80E-45 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01816 | K13430 | - | csv:101219880 | 925.235 |