Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01816 ATGGGTTGTTTTCCTTGTTTCGATTCGAGGGAGGAGGAGAAGTTGAATCCTGAAAAGGAAAGCGATGATGGTAAGCAAGACCATCCAATGGTTCCACCAAACATTGCCAAGTTGCCTTCTGGAATAGACAAACTTAGATCGAAAAATAATGGAGGTTCCAAAAGGGAACAGCAGATTCCCACACCTCTTGTCAATATTTCTGCTCAAACATTCACTTTTCGTGAGCTTGCAACAGCTACGAAGAATTTTAGACCAGAGTGTTTTATTGGGGAAGGAGGATTTGGACGTGTATACAAAGGGCGGCTCGAAAGCACAAGCCAGATTGTTGCTGTTAAACAGTTGGATAGGAATGGTCTTCAAGGCAACAGAGAATTCCTAGTGGAAGTTCTCATGCTTAGCCTTCTGCATCATCCAAATCTGGTGAATCTGATTGGTTACTGTGCTGATGGAGATCAACGACTTCTTGTGTATGAGTTCATGCCTTTGGGATCATTGGAAGACCATCTTCACGAAATTCCACCTGAGAAGGAACCCCTAGATTGGAACACAAGAATGAAAATAGCTGCTGGTGCAGCCAGAGGTTTAGAGTACTTGCATGACAAAGCCAACCCTCCAGTTATTTATAGAGACTTCAAATCTTCCAATATATTACTTGATGAAGGATACCATCCAAAGCTTTCTGATTTTGGCCTTGCAAAGCTTGGCCCTGTTGGAGATAAATCTCATGTTTCCACCAGGGTCATGGGAACATATGGTTACTGTGCTCCCGAATACGCCATGACTGGACAATTAACCGTCAAATCTGATGTTTATAGTTTCGGTGTTGTCTTCTTAGAGTTGATTACTGGAAGGAGAGCCATTGATAGTACCCGACCCCAAGGAGAACAGAATCTTGTTACATGGGCACGCCCGTTTTTTAACGATCGCAGAAGATTCTCAAAATTGGCTGATCCACAGTTGCAGGGGCGATATCCGATGAGAGGTCTCTACCAGGCTTTAGCTGTGGCATCCATGTGTACGCAAGAACAGGCTGCCGCCCGTCCGCTCATTGGAGATGTGGTTACTGCCCTGTCTTATTTAGCAAATCAATCCTACTATCCAAGTTCTCCTCCAGGTACTGCTGCTGCTGGTGCTGCTGGTACTGCTGCTCAGAGAGGTTCTGGTGACCGGGATGAAAGACGGAATAGAGACGAGAAAGGTGGAGGAGGGATGATAAAGAATGAAGAAGGGGGAGCATCTGGACGAAGGTGGCCATTGGATGGTCCCGAGAAGGACGATTCCCCAAGGGAGACTGCTAGGATTTTGAATAGGGATTTAGACAGAGAACGTGCAGTTGCCGAGGCCAAGATGTGGGGAGAAAATTGGCGAGAAAAACGACGGCAGAGCACACAAGGCAGTTTTGATGGATCTAATGGATAA 1419 45.81 MGCFPCFDSREEEKLNPEKESDDGKQDHPMVPPNIAKLPSGIDKLRSKNNGGSKREQQIPTPLVNISAQTFTFRELATATKNFRPECFIGEGGFGRVYKGRLESTSQIVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHEIPPEKEPLDWNTRMKIAAGAARGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRRAIDSTRPQGEQNLVTWARPFFNDRRRFSKLADPQLQGRYPMRGLYQALAVASMCTQEQAAARPLIGDVVTALSYLANQSYYPSSPPGTAAAGAAGTAAQRGSGDRDERRNRDEKGGGGMIKNEEGGASGRRWPLDGPEKDDSPRETARILNRDLDRERAVAEAKMWGENWREKRRQSTQGSFDGSNG* 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 24519828 24524229 + Chy11G203960.1 Chy11g01816 237577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01816 472 MobiDBLite consensus disorder prediction 418 463 - -
Chy11g01816 472 Gene3D Transferase(Phosphotransferase) domain 1 160 368 - -
Chy11g01816 472 SUPERFAMILY Protein kinase-like (PK-like) 59 357 IPR011009 -
Chy11g01816 472 MobiDBLite consensus disorder prediction 1 60 - -
Chy11g01816 472 Gene3D Phosphorylase Kinase; domain 1 67 159 - -
Chy11g01816 472 MobiDBLite consensus disorder prediction 386 404 - -
Chy11g01816 472 ProSiteProfiles Protein kinase domain profile. 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01816 472 MobiDBLite consensus disorder prediction 370 472 - -
Chy11g01816 472 MobiDBLite consensus disorder prediction 7 27 - -
Chy11g01816 472 CDD STKc_IRAK 89 357 - -
Chy11g01816 472 Pfam Protein kinase domain 88 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy11g01816 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Chy11g01816 472 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 467 - -
Chy11g01816 472 PANTHER OS07G0668900 PROTEIN 1 467 - -
Chy11g01816 472 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01712 Chy-Chr2:17498110 Chy11g01816 Chy-Chr11:24519828 3.02E-155 dispersed
Chy04g00919 Chy-Chr4:13055727 Chy11g01816 Chy-Chr11:24519828 8.63E-102 dispersed
Chy06g00666 Chy-Chr6:4553339 Chy11g01816 Chy-Chr11:24519828 1.74E-50 dispersed
Chy06g01805 Chy-Chr6:21715067 Chy11g01816 Chy-Chr11:24519828 1.00E-177 dispersed
Chy07g00395 Chy-Chr7:3164790 Chy11g01816 Chy-Chr11:24519828 3.13E-162 dispersed
Chy07g01635 Chy-Chr7:20364310 Chy11g01816 Chy-Chr11:24519828 1.84E-104 dispersed
Chy11g01816 Chy-Chr11:24519828 Chy12g00891 Chy-Chr12:14274954 2.34E-179 dispersed
Chy11g01816 Chy-Chr11:24519828 Chy10g00613 Chy-Chr10:12711144 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71589 PF00069 Pkinase 2.80E-45 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01816 K13430 - csv:101219880 925.235