Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01862 | ATGGCCGGGTTGGTCACTGGTTCCCAACACTATCCGCACGTTGTTGATGAGAGTCACCGTGGACCTCCACTCTCGTCGAAAATCTGTCGAGTTTGCGGTGATGAAATAGGACTGACAGAAGATGGAAAAGTATTTTTGGCATGTCTTGCGTGTAATTTTCCTGTTTGTCGTCCTTGTTATGAATATGAAAGGAGCGAAGGTAACAAGTGTTGTCCCCAATGTAACACTCGCTACAAGCGTCACAAAGGTTCACCCAGAGTGATCGGCGACGATGAAGATGCTGACGATGCTGATGATTTTGAAGATGAATTCCCCATTAAACACAACAAAAACGACGAATTTCAAGCAAAACAGCCTAATCATTCGGAAAACGATGGGTACAATGATCAGAATTGGCATAAAAATGTGCAGAGCTCGTTCTCAGTTGCAGGAAGTGTGAATGGAAAGGATATGGAAGGGGAGAAGGAAGGTGGCTATGGAAGCGTAGAATGGAAAGAGAGAATTGATAAATGGAAAGTAAGACAAGAGAAGAGAGGTTTGGGGAATAAAGACGATGGAAGTAACAATGATCAAGAAGAAGATGACTACTTGTTGGCGGAGGCCCGGCAGCCATTATGGCGGAAACTACCGATATCGTCAAGCAAAATCAGTCCATATCGGATCGTCATTGTTCTCCGTCTCGTAATTCTTGCATTCTTCTTCCGATTTCGGATCCTTACTCCGGCCTACGACGCATTCCCCTTATGGCTGATCTCCGTCATATGCGAAATCTGGTTCGGCTTCTCTTGGATTCTCGATCAGTTCCCCAAATGGGCACCAATCAACAGAGAAACTTACCTCGACCGTCTCTCCATGCGGTTCGAGCGCGAAGGCGAGCCCAATCTTCTCTCACCGATCGATTTCTTCGTCAGTACAGTGGATCCTCTGAAAGAACCGCCGATCATTACCGCCAACACCGTCCTCTCGATTCTCGCGGTTGATTATCCGGTGGAGAAGGTCAGCTGCTACGTTTCGGATGATGGAGCGTCGATGTTGTTGTTTGATACACTGGCGGAGACGGCGGAGTTTGCTCGGAGGTGGGTGCCGTTTTGTAAGAAGTTTAGTATTGAACCTAGGGCTCCGGAGTTTTACTTCTCGAAGAAGATGGATTACTTGAAGGATAAGGTGTTGCCGAGCTTTGTGAAGGAGAGGAGGGCAATGAAGAGGGAATATGAAGAGTTCAAGGTGAGGATCAATGCGTTGGTGGCGAAGGCTCAGAAGAAACCAGAAGAGGGATGGGTTATGCAAGATGGGACTCCATGGCCTGGAAACCTCACCCGTGATCATCCTGGCATGATACAGGTGTATCTGGGGAGTGAAGGTGCACTTGATGTCGAAGGTAAAGAGTTGCCTCGTCTTGTATATGTTTCTCGTGAGAAACGCCCTGGATATCAACACCACAAGAAAGCTGGTGCTATGAATGCACTTGTTCGAGTCTCTGCAGTCCTCACAAATGCACCATTCATCTTGAATTTGGATTGTGATCACTACGTCAACAATAGCAAAGCTGTAAGGGAAGCCATGTGCTTTCTAATGGACCCTCAGCTTGGAAAGAAACTGTGCTATGTTCAGTTTCCTCAAAGATTTGATGGTATTGATCGCCACGATAGATATGCTAATCGTAATATAGTGTTCTTTGATATCAACATGCGAGGACTAGATGGAATCCAAGGCCCAGTTTATGTTGGCACAGGATGTGTCTTCAACAGGCCGGCTTTATATGGATATGAACCACCGGTCTCTGAGAAAAGGCCAAAGATGACATGTGATTGCTGGCCTTCTTGGTGCTGCTGCTGCTGCGGTGGTTCAAGGAAATCGAAGTCTAAGAGGAAAGGAGAAAGAGGTTTGCTAGGAGGCTTGTTCAAGAAGAAGAAAATGATGGGGAAGAGTTATGTAAGGAAAGCTCCGGGACCAGTTTTTGATCTTGAAGAGATTGAAGAAGGGTTTGAAGGTTACGATGAGTTGGAGAAGTCATCACTCATGTCCCAGAAGAATTTTGAGAAAAGATTCGGGCAGTCACCAGTTTTCATCGCTTCCACCCTTAAGGAAGATGGAGGTCTGCCAGAAGGGACTAACAGCACATCACTCGTTAAGGAAGCCATCCATGTGATAAGCTGTGGTTATGAAGATAAAACAGAATGGGGAAAAGAGATAGGTTGGATTTACGGGTCTGTCACTGAGGATATTTTGACTGGATTCAAGATGCATTGTAGAGGATGGAAGTCGGTGTACTGCATGCCCCATAGACCAGCTTTCAAGGGATCGGCTCCGATAAATCTTTCGGATCGTTTGCACCAAGTTCTGAGATGGGCTTTAGGTTCTGTTGAAATCTTCCTCAGCCGACACTGCCCGCTGTGGTATGCTTATGGAGGAAAGCTAAAATGGCTTGAGAGGCTTGCTTACATCAACACTATTGTTTACCCTTTTACTTCCATTCCATTACTTGCTTACTGCACAATTCCTGCTGTCTGTCTTCTCACTGGAAAATTCATTATCCCCACATTGACGAACTTGGCTAGTGTCTGGTTCATGGCCTTGTTTATTTCCATCATTGCAACGGCGGTGCTGGAACTTCGATGGAGTGAAGTGAGCATTGAAGACTTGTGGCGTAATGAGCAATTCTGGGTGATTGGTGGTGTCTCTGCACATCTTTTTGCAGTGTTCCAAGGGCTTCTCAAGGTCCTTGGTGGAGTAGACACCAACTTCACAGTTACAGCAAAAGCCGCTGAAGACACCGAGTTTGGAGAGCTCTATCTTTTCAAGTGGACGACTCTTCTTATCCCACCAACCACTCTCATAATCTTGAATATGGTTGGAGTGGTTGCTGGAATTTCAGATGCAATCAACAATGGATACGGTTCATGGGGTCCTCTATTTGGAAAGCTGTTTTTCGCTTTCTGGGTCATTGTTCATCTCTATCCTTTCCTCAAGGGTCTGATGGGAAAACAAAACAGGACTCCCACCATTGTCGTCCTTTGGTCCGTTCTTCTTGCTTCCATATTTTCACTTGTTTGGGTGCGTATCGATCCCTTCTTGCCCAAGCAAACTGGTCCTGTCCTCAAACAATGTGGAGTTGATTGCTAG | 3123 | 46.05 | MAGLVTGSQHYPHVVDESHRGPPLSSKICRVCGDEIGLTEDGKVFLACLACNFPVCRPCYEYERSEGNKCCPQCNTRYKRHKGSPRVIGDDEDADDADDFEDEFPIKHNKNDEFQAKQPNHSENDGYNDQNWHKNVQSSFSVAGSVNGKDMEGEKEGGYGSVEWKERIDKWKVRQEKRGLGNKDDGSNNDQEEDDYLLAEARQPLWRKLPISSSKISPYRIVIVLRLVILAFFFRFRILTPAYDAFPLWLISVICEIWFGFSWILDQFPKWAPINRETYLDRLSMRFEREGEPNLLSPIDFFVSTVDPLKEPPIITANTVLSILAVDYPVEKVSCYVSDDGASMLLFDTLAETAEFARRWVPFCKKFSIEPRAPEFYFSKKMDYLKDKVLPSFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNLTRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYQHHKKAGAMNALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINMRGLDGIQGPVYVGTGCVFNRPALYGYEPPVSEKRPKMTCDCWPSWCCCCCGGSRKSKSKRKGERGLLGGLFKKKKMMGKSYVRKAPGPVFDLEEIEEGFEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLKEDGGLPEGTNSTSLVKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPHRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYAYGGKLKWLERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIIATAVLELRWSEVSIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTAKAAEDTEFGELYLFKWTTLLIPPTTLIILNMVGVVAGISDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGKQNRTPTIVVLWSVLLASIFSLVWVRIDPFLPKQTGPVLKQCGVDC* | 1041 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 24856924 | 24861769 | - | Chy11G204420.1 | Chy11g01862 | 237623 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01862 | 1040 | MobiDBLite | consensus disorder prediction | 82 | 130 | - | - | |
Chy11g01862 | 1040 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 16 | 102 | IPR013083 | - | |
Chy11g01862 | 1040 | Coils | Coil | 397 | 417 | - | - | |
Chy11g01862 | 1040 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 405 | 591 | IPR029044 | - | |
Chy11g01862 | 1040 | MobiDBLite | consensus disorder prediction | 101 | 119 | - | - | |
Chy11g01862 | 1040 | CDD | mRING-HC-C4C4_CesA_plant | 27 | 77 | - | - | |
Chy11g01862 | 1040 | Pfam | Zinc-binding RING-finger | 24 | 95 | IPR027934 | - | |
Chy11g01862 | 1040 | SUPERFAMILY | RING/U-box | 22 | 99 | - | - | |
Chy11g01862 | 1040 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 154 | 1040 | - | - | |
Chy11g01862 | 1040 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 24 | 116 | - | - | |
Chy11g01862 | 1040 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 313 | 851 | IPR029044 | - | |
Chy11g01862 | 1040 | Pfam | Cellulose synthase | 299 | 1033 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
Chy11g01862 | 1040 | PANTHER | CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED | 154 | 1040 | - | - | |
Chy11g01862 | 1040 | PANTHER | CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED | 24 | 116 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy08g00458 | Chy-Chr8:11169563 | Chy11g01862 | Chy-Chr11:24856924 | 0 | dispersed | |
Chy11g00501 | Chy-Chr11:5396726 | Chy11g01862 | Chy-Chr11:24856924 | 0 | dispersed | |
Chy11g00502 | Chy-Chr11:5412525 | Chy11g01862 | Chy-Chr11:24856924 | 0 | dispersed | |
Chy11g01862 | Chy-Chr11:24856924 | Chy12g00068 | Chy-Chr12:618907 | 0 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01862 | K10999 | - | csv:101205733 | 2034.22 |