Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01923 ATGCAAAGCTCCACGAGCCATTCGTCCGAGTACTCACCAGAACACTCTCCGTCCGCTGCTGCTGCTGCTGCCACCGCTACTGCCACCGGAAAATGGGCCTCCACCCTTCTTAAGGAGTGTGCTAGAGCCATCTCTGAAAAGGACTCCAACAAAATCCACCATTTTCTTTGGATGTTGAATGAGTTGGCTTCCCCTTATGGTGACTCTGATCAAAAAATGGCTTTCTACTTCTTGCAAGCTCTCTTCTGCCGGGCCACAGAAACTGGCCTCACTTGCTACAAAACCCTCGTCGCCGTCGCCGAGAAAAATCATAACTTCGACTCTGCCCTGAGGCTCATCCTCAAGTTTCAAGAGGCAAGTCCATGGACGACATTCGGGCATGTGGCATCGAACGGTGCAATTCTCGAAGCGCTCGAGGGAGAAACGAAACTCCACATCATCGACATAAGCAACACCCTTTGCACTCAGTGGCCAACCCTACTGGAATCCCTAGCCACACGCAATGATGACACTCCACATCTAAAGCTAACGGTGGTGGCAACAACAAGTATAGTGAAGTGTTTAATGAAGGAAATTGGACAAAGAATGGAGAAATTTGCAAGGCTAATGGGAGTCCCCTTTGAATTCAACCCTATAACAAATATCGACCACTTAACTGACCTCACAAATGAAGCCCTCAAAGTAGAAGAAGGTGAGGCCATTGCCATAAATTGCATTGGAGCCTTAAGAAGAGTGAAAGTTGAAGAAAGAAACAATGTGATTTCAATGTTGAAATCACTAAAGCCTAGAGTTTTAACAATAGTAGAGGAAGAAGCTGATTTCATAAGCTCTAAAAATGACTTTTTGAAGTGCTTTGAAGAGTGTCTTAGATTTTACACTCTTTACTTTGAGATGTTGGAAGAGAGCTTTGTGGCAACAAGCAATGAGAGATTGGTTTTGGAAAGAGAATGTTCAAGATGCATTGTGAGGCTTTTGGGGTGTGATCATGATCAAATTAGTGAGGAAGAAATGGGGAGTGAGAGAAGAGAAAAAGGAAAGCAATGGACAAAAAGACTCAAACAAGCACTTTTTTCATCAGCTAATTTTAGTGAAGATGTAATGGATGATGTTAAGGCTTTGCTCAAGCGGTACAAACCTGGTTGGGCGTTGCTGCGTCCGGCCACGGCTGCTATCGGAGACGAAGAAGAAAATGGTGATGGTGTGTCAAGTGGAATTTACTTGACATGGAAGGAAGAACCAGTGGTTTGGGTTTCAGCATGGAAACCCTAA 1269 44.68 MQSSTSHSSEYSPEHSPSAAAAAATATATGKWASTLLKECARAISEKDSNKIHHFLWMLNELASPYGDSDQKMAFYFLQALFCRATETGLTCYKTLVAVAEKNHNFDSALRLILKFQEASPWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLESLATRNDDTPHLKLTVVATTSIVKCLMKEIGQRMEKFARLMGVPFEFNPITNIDHLTDLTNEALKVEEGEAIAINCIGALRRVKVEERNNVISMLKSLKPRVLTIVEEEADFISSKNDFLKCFEECLRFYTLYFEMLEESFVATSNERLVLERECSRCIVRLLGCDHDQISEEEMGSERREKGKQWTKRLKQALFSSANFSEDVMDDVKALLKRYKPGWALLRPATAAIGDEEENGDGVSSGIYLTWKEEPVVWVSAWKP* 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25354236 25356009 + Chy11G205030.1 Chy11g01923 237684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01923 422 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 421 IPR005202 -
Chy11g01923 422 Pfam GRAS domain family 35 421 IPR005202 -
Chy11g01923 422 MobiDBLite consensus disorder prediction 1 20 - -
Chy11g01923 422 ProSiteProfiles GRAS family profile. 24 421 IPR005202 -
Chy11g01923 422 PANTHER PROTEIN SHORT-ROOT-LIKE 10 421 - -
Chy11g01923 422 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00853 Chy-Chr2:5447972 Chy11g01923 Chy-Chr11:25354236 1.00E-48 dispersed
Chy11g00187 Chy-Chr11:1862058 Chy11g01923 Chy-Chr11:25354236 2.94E-134 dispersed
Chy11g01923 Chy-Chr11:25354236 Chy01g01269 Chy-Chr1:15817039 8.61E-47 dispersed
Chy11g01923 Chy-Chr11:25354236 Chy01g00400 Chy-Chr1:2827306 1.99E-48 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18799 PF03514 GRAS 3.90E-94 CL0063 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01923 - - csv:101206730 790.415