Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01931 ATGGAAGTGCAAGATCATGGTCACATAATTGAAGTGTGTGGAGATGTGCAAGCTGTTGGGCCTAGCATTGTGGGAAGTAAAATTTGTGGGGATGCGCCTTCTTGTGGATTTTCTGATGCAAAGAACAGTTCAAAAGATGCAAAGGAGCGTTCTGCATCCATGCGAAAGCTTTGCATAGCAGTTGTTCTTTGCATTGTTTTTATGAGTGTAGAAGTAGTCGGAGGTATCAAAGCAAACAGTCTTGCAATATTGACTGATGCTGCTCATTTGTTGTCAGATGTTGCTGCTTTTGCTATTTCTTTGTTCTCACTCTGGGCCTCTGGTTGGGAGGCAACTCCACGTCAGTCCTATGGTTTCTTCCGCATTGAAATACTTGGTGCTCTTGTTTCCATTCAGATGATTTGGCTTCTAGCTGGAATTCTTGTTTACGAAGCTATTTTCCGTCTCATCAATGGTCCGGGAGAAGTTAAGGGGTTGCTCATGTTTGCTGTTTCTACGTTTGGGTTAGTTGTTAACATAGCCATGGCTCTGCTACTTGGTCACGAACATGGTCATGCCCATTCTCATGGTCACAATCATGGACATGGTGAACACGACCATGGTCATGGCAGCCACGAACATGGTGAGGAAGATCATAGACATCGTCATGGAATAAGTGTGACCATGCACCACCACCACCATGAAGAGAAGAGATCTGCCAACGATGGTGTTGAGCACCACCACCACCATCATCATCACGAACACAAGGAATCAACAACTGTCCCCTTGCTTGATAGTTCACAAAAGGTTACGAAAACGCAAAAGAAACAACGAAACATAAATGTACAGGGGGCTTATCTTCATGTTCTTGGAGATTCCATCCAAAGCATCGGGGTAATGATCGGTGGGGCAATCATATGGCATAAACCAGAATACAAGATTCTTGACCTGATATGCACCCTCATTTTCTCTGCGATTGTGTTGTGCACAACAATTCAAATGCTTAGAAATATCCTTGAGGTATTGATGGAGAGCACGCCAAGGGAGGTGGACGCAACAAAGCTGGAAAAGGGTTTGTGTGAGATGGAGGAGGTAGTTGCAATCCATGAACTGCACATTTGGGCCATAACTGTTGGGAAGATTCTATTGGCATGTCATGTTATAATAAAGCCAGAGGCAAATGCAGACATGGTATTGGACAACGTGATTGAGTATATTAGAAGAGAGTACAACATCAGCCATGTTACCATTCAGATAGAGCGTCAATAG 1248 43.91 MEVQDHGHIIEVCGDVQAVGPSIVGSKICGDAPSCGFSDAKNSSKDAKERSASMRKLCIAVVLCIVFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWASGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIFRLINGPGEVKGLLMFAVSTFGLVVNIAMALLLGHEHGHAHSHGHNHGHGEHDHGHGSHEHGEEDHRHRHGISVTMHHHHHEEKRSANDGVEHHHHHHHHEHKESTTVPLLDSSQKVTKTQKKQRNINVQGAYLHVLGDSIQSIGVMIGGAIIWHKPEYKILDLICTLIFSAIVLCTTIQMLRNILEVLMESTPREVDATKLEKGLCEMEEVVAIHELHIWAITVGKILLACHVIIKPEANADMVLDNVIEYIRREYNISHVTIQIERQ* 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25410441 25411688 + Chy11G205110.1 Chy11g01931 237692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01931 415 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 4 414 - -
Chy11g01931 415 MobiDBLite consensus disorder prediction 184 256 - -
Chy11g01931 415 SUPERFAMILY Cation efflux protein transmembrane domain-like 51 337 IPR027469 -
Chy11g01931 415 TIGRFAM CDF: cation diffusion facilitator family transporter 54 415 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Chy11g01931 415 Pfam Cation efflux family 58 336 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Chy11g01931 415 Gene3D Cation efflux protein transmembrane domain 53 335 IPR027469 -
Chy11g01931 415 PANTHER METAL TOLERANCE PROTEIN A1 4 414 - -
Chy11g01931 415 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 344 413 IPR036837 -
Chy11g01931 415 MobiDBLite consensus disorder prediction 192 236 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01493 Chy-Chr4:21592707 Chy11g01931 Chy-Chr11:25410441 2.55E-13 dispersed
Chy11g01931 Chy-Chr11:25410441 Chy12g00233 Chy-Chr12:2670518 1.32E-43 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01931 K14689 - csv:101213602 726.472