Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01931 | ATGGAAGTGCAAGATCATGGTCACATAATTGAAGTGTGTGGAGATGTGCAAGCTGTTGGGCCTAGCATTGTGGGAAGTAAAATTTGTGGGGATGCGCCTTCTTGTGGATTTTCTGATGCAAAGAACAGTTCAAAAGATGCAAAGGAGCGTTCTGCATCCATGCGAAAGCTTTGCATAGCAGTTGTTCTTTGCATTGTTTTTATGAGTGTAGAAGTAGTCGGAGGTATCAAAGCAAACAGTCTTGCAATATTGACTGATGCTGCTCATTTGTTGTCAGATGTTGCTGCTTTTGCTATTTCTTTGTTCTCACTCTGGGCCTCTGGTTGGGAGGCAACTCCACGTCAGTCCTATGGTTTCTTCCGCATTGAAATACTTGGTGCTCTTGTTTCCATTCAGATGATTTGGCTTCTAGCTGGAATTCTTGTTTACGAAGCTATTTTCCGTCTCATCAATGGTCCGGGAGAAGTTAAGGGGTTGCTCATGTTTGCTGTTTCTACGTTTGGGTTAGTTGTTAACATAGCCATGGCTCTGCTACTTGGTCACGAACATGGTCATGCCCATTCTCATGGTCACAATCATGGACATGGTGAACACGACCATGGTCATGGCAGCCACGAACATGGTGAGGAAGATCATAGACATCGTCATGGAATAAGTGTGACCATGCACCACCACCACCATGAAGAGAAGAGATCTGCCAACGATGGTGTTGAGCACCACCACCACCATCATCATCACGAACACAAGGAATCAACAACTGTCCCCTTGCTTGATAGTTCACAAAAGGTTACGAAAACGCAAAAGAAACAACGAAACATAAATGTACAGGGGGCTTATCTTCATGTTCTTGGAGATTCCATCCAAAGCATCGGGGTAATGATCGGTGGGGCAATCATATGGCATAAACCAGAATACAAGATTCTTGACCTGATATGCACCCTCATTTTCTCTGCGATTGTGTTGTGCACAACAATTCAAATGCTTAGAAATATCCTTGAGGTATTGATGGAGAGCACGCCAAGGGAGGTGGACGCAACAAAGCTGGAAAAGGGTTTGTGTGAGATGGAGGAGGTAGTTGCAATCCATGAACTGCACATTTGGGCCATAACTGTTGGGAAGATTCTATTGGCATGTCATGTTATAATAAAGCCAGAGGCAAATGCAGACATGGTATTGGACAACGTGATTGAGTATATTAGAAGAGAGTACAACATCAGCCATGTTACCATTCAGATAGAGCGTCAATAG | 1248 | 43.91 | MEVQDHGHIIEVCGDVQAVGPSIVGSKICGDAPSCGFSDAKNSSKDAKERSASMRKLCIAVVLCIVFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWASGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAIFRLINGPGEVKGLLMFAVSTFGLVVNIAMALLLGHEHGHAHSHGHNHGHGEHDHGHGSHEHGEEDHRHRHGISVTMHHHHHEEKRSANDGVEHHHHHHHHEHKESTTVPLLDSSQKVTKTQKKQRNINVQGAYLHVLGDSIQSIGVMIGGAIIWHKPEYKILDLICTLIFSAIVLCTTIQMLRNILEVLMESTPREVDATKLEKGLCEMEEVVAIHELHIWAITVGKILLACHVIIKPEANADMVLDNVIEYIRREYNISHVTIQIERQ* | 416 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 25410441 | 25411688 | + | Chy11G205110.1 | Chy11g01931 | 237692 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01931 | 415 | PANTHER | CATION EFFLUX PROTEIN/ ZINC TRANSPORTER | 4 | 414 | - | - | |
Chy11g01931 | 415 | MobiDBLite | consensus disorder prediction | 184 | 256 | - | - | |
Chy11g01931 | 415 | SUPERFAMILY | Cation efflux protein transmembrane domain-like | 51 | 337 | IPR027469 | - | |
Chy11g01931 | 415 | TIGRFAM | CDF: cation diffusion facilitator family transporter | 54 | 415 | IPR002524 | GO:0006812|GO:0008324|GO:0016021|GO:0055085 | |
Chy11g01931 | 415 | Pfam | Cation efflux family | 58 | 336 | IPR002524 | GO:0006812|GO:0008324|GO:0016021|GO:0055085 | |
Chy11g01931 | 415 | Gene3D | Cation efflux protein transmembrane domain | 53 | 335 | IPR027469 | - | |
Chy11g01931 | 415 | PANTHER | METAL TOLERANCE PROTEIN A1 | 4 | 414 | - | - | |
Chy11g01931 | 415 | SUPERFAMILY | Cation efflux protein cytoplasmic domain-like | 344 | 413 | IPR036837 | - | |
Chy11g01931 | 415 | MobiDBLite | consensus disorder prediction | 192 | 236 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g01493 | Chy-Chr4:21592707 | Chy11g01931 | Chy-Chr11:25410441 | 2.55E-13 | dispersed | |
Chy11g01931 | Chy-Chr11:25410441 | Chy12g00233 | Chy-Chr12:2670518 | 1.32E-43 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01931 | K14689 | - | csv:101213602 | 726.472 |