Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01953 ATGGCTACTTTAAACTTAGGCTCTGCTTCTCACTTTGTTGACCAACTTCAGCAGCAACGCCCTGATCTCCATCTAGATTCCCCTCCAAGTTCTGACCATGTCAACCACTTCAACGGTAGCGGTGGCTCTGGCGGTAGCGGCGATGTCATGGTCCGTCGCCCTAGGGGCCGCCCGGCCGGCTCCAAGAACAAGCCAAAGCCCCCAGTAATCATCACGCGCGAGAGCGCCAACACGCTCCGAGCTCATATCTTGGAAGTTGGTGGTGGATGTGACGTCTTCGAAGCTGTAGCCGGCTACGCTCGGCGACGACAACGCGGGATCTGTGTGTTGAGTGGAAGTGGGATTGTTAATAATGTTAGCTTACGGCAACCCGCAGCTGCTGGATCGGTGTTGACGTTGCAAGGGAGGTTCGAGATTTTGTCGTTGTCGGGATCGTTCTTGCCCCCGCCTGCTCCGCCCGGTGCTACTAGTCTTACGATTTTCTTGGCCGGAGGACAAGGACAAGTGGTAGGAGGGAATGTGGTTGGAGCTTTGATCGCGTCAGGGCCAGTAATCGTCATAGCATCGTCGTTTAGCAACGTTGCATACGAGAGGTTGCCATTGGATGAAGAAGAAATGCCGATGCAGGCTGGTGGCGGTGACGGTGACGGAGGCGAGGGTGGTGGCGAGGGTCACAATAACCCTTTTCCTGATGCATCTTCGGGTTTGCCATTTCTAAACCTGCCTATGAACATGCCCAATCAGAATCAATTTTTTGGTTGA 762 54.2 MATLNLGSASHFVDQLQQQRPDLHLDSPPSSDHVNHFNGSGGSGGSGDVMVRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVGGGCDVFEAVAGYARRRQRGICVLSGSGIVNNVSLRQPAAAGSVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIASGPVIVIASSFSNVAYERLPLDEEEMPMQAGGGDGDGGEGGGEGHNNPFPDASSGLPFLNLPMNMPNQNQFFG* 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25567509 25568600 - Chy11G205330.1 Chy11g01953 237714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01953 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 20 250 - -
Chy11g01953 253 ProSiteProfiles PPC domain profile profile. 76 212 IPR005175 -
Chy11g01953 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 20 250 IPR014476 GO:0003680
Chy11g01953 253 MobiDBLite consensus disorder prediction 205 233 - -
Chy11g01953 253 Pfam Plants and Prokaryotes Conserved (PCC) domain 80 193 IPR005175 -
Chy11g01953 253 SUPERFAMILY AF0104/ALDC/Ptd012-like 76 208 - -
Chy11g01953 253 MobiDBLite consensus disorder prediction 21 69 - -
Chy11g01953 253 MobiDBLite consensus disorder prediction 21 42 - -
Chy11g01953 253 PIRSF ESCAROLA 3 251 IPR014476 GO:0003680
Chy11g01953 253 Gene3D - 79 209 - -
Chy11g01953 253 CDD DUF296 80 163 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02320 Chy-Chr2:27206468 Chy11g01953 Chy-Chr11:25567509 1.41E-66 dispersed
Chy04g00082 Chy-Chr4:850886 Chy11g01953 Chy-Chr11:25567509 1.71E-91 dispersed
Chy06g02135 Chy-Chr6:25683354 Chy11g01953 Chy-Chr11:25567509 3.58E-94 dispersed
Chy09g01146 Chy-Chr9:13721525 Chy11g01953 Chy-Chr11:25567509 1.03E-72 dispersed
Chy10g00525 Chy-Chr10:11822713 Chy11g01953 Chy-Chr11:25567509 2.33E-67 dispersed
Chy11g01953 Chy-Chr11:25567509 Chy11g01989 Chy-Chr11:25805445 4.01E-62 dispersed
Chy11g01953 Chy-Chr11:25567509 Chy06g00280 Chy-Chr6:1884621 7.03E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01953 - - csv:101203160 471.085