Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01960 ATGATGAACCAACCTGGAAAATGGGTGGTGCTTGTGGCGGCGATATGGATTCAGGCATTTGCTGGCACAAATTTTGATTTCCCTTCTTATTCTTCCGATCTGAAGGCGGCTCTCGGGATGTCGCAGGTGCAGCTCAACTATCTGGCGGTGGCTTCCGACCTTGGTAAGGCCTTTGGGTGGTGCTCTGGTGTTGCTCTCTTGTATTTTCCTTTGTGGGTTGTGATGTTCATGGCTGCTTCCATGGGATTTCTTGGCTATGGCTTTCAATGGCTTCTCCTTCAAAGGATTATCTCTCTGCCTTACTCCATGGTTTATCTTCTCTGCCTGATGGCTGGATGTAGTATTTGCTGGTTCAATACGGTCTGCTATATCTCATGCATCCAAAATTTTCCAGCCAACCGTGCGCTTGCACTGTCCTTGATTGTCAGCTTCAATGGCGTCAGTGCAGCTCTATACACTCTAATTGCCAATGCAATAGACCCCGGTGATGCCAGCTTGTACCTCTTCCTAAATGCACTGGTTCCTCTTATCATCTCTGTCGTTGCCCTCCTCCCAATGCTTCATAAGCCACCGGTTCAGCCGTCCTCTGATGATGCCATCCGTCATGACTCCCTCATCTTCATCTGTTTATACATCACGGCCATTATCACAGGGTTGTACTTAATCACCTTCAATTCCATGCCTTCCAACAAATACGGGTCCCAAATTCTGTTAGCAGGGGCTTTTGCCCTTTTACTAGTTCCTCTTTGTTTGCCAGGAGTTCTGAGTACACACAGGTGGTTGGTTCGGATCATATCCACCACTTTGAACTGTCTTATTCACTCTAGATTTAGCCTTGTTGATCATGAGCTTCACCAGGAGCTCATCACTATTGAATCAGAACGAAATAGCATGAAGGGCATCGTCCCTTTTGAATCTAAAGAGAAGGAAAGCATTTCAAGGAAGGTGATGGAGAAAGAGAACTTGGTAGTGCTTGAAGAAGAGCATTCCGCTAAGATGCTCATGCGACAGTTGGATTTTTGGCTCTATTATGCTGCATACTTTTGTGGTGGGACGATTGGGTTGGTTTACAGCAACAGTCTTGGGCAAATTGCACAGTCGCTTGGATACAGTTCATCAACAAGTTCACTTGTAACACTCTACTCTTCTTGCTCCTTCTTTGGGCGGTTAATCTCAGCGGCCCCAGATTTCATGCGTGAAAGGGGGCACTTCGCGAGAACAGGGTGGCTAGCCATTGCACTTGTGCCAACTCCAATCGCCTTCATTCTACTTGCTGCGTCAGGCAGCAAAATCGCATTACAAGTCGGCACTAGTTTGATCGGCCTAAGCTCGGGATTCATATTCTCAGCCTCAGTCTCAATCACATCAGAATTATTCGGACCGAACAGCTCAGGAGTCAACCACAACATCCTCATCACTAACATCCCTCTCGGCTCGTTCCTCTACGGCGTCCTGGCAGCAATGGCATACGATTCAAACGCCGGAAGCTCTCACCAGACGTCAGCGTTGGGGGATGCAGTAGTGTGCATCGGCCAAAATTGCTATCTGATGACGTTCGTATGGTGGGCTTGCATCTCCATCTTCGGCCTTGCTTCTAGCTTCTTGCTATTCCGACGGACGAAATCGGCTTACGACCGCCATTACGACAGCAACCCAAGCAAGATGCAACCATTTTAG 1677 47.94 MMNQPGKWVVLVAAIWIQAFAGTNFDFPSYSSDLKAALGMSQVQLNYLAVASDLGKAFGWCSGVALLYFPLWVVMFMAASMGFLGYGFQWLLLQRIISLPYSMVYLLCLMAGCSICWFNTVCYISCIQNFPANRALALSLIVSFNGVSAALYTLIANAIDPGDASLYLFLNALVPLIISVVALLPMLHKPPVQPSSDDAIRHDSLIFICLYITAIITGLYLITFNSMPSNKYGSQILLAGAFALLLVPLCLPGVLSTHRWLVRIISTTLNCLIHSRFSLVDHELHQELITIESERNSMKGIVPFESKEKESISRKVMEKENLVVLEEEHSAKMLMRQLDFWLYYAAYFCGGTIGLVYSNSLGQIAQSLGYSSSTSSLVTLYSSCSFFGRLISAAPDFMRERGHFARTGWLAIALVPTPIAFILLAASGSKIALQVGTSLIGLSSGFIFSASVSITSELFGPNSSGVNHNILITNIPLGSFLYGVLAAMAYDSNAGSSHQTSALGDAVVCIGQNCYLMTFVWWACISIFGLASSFLLFRRTKSAYDRHYDSNPSKMQPF* 559
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25607842 25610566 - Chy11G205400.1 Chy11g01960 237721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01960 558 Pfam Nodulin-like 7 252 IPR010658 -
Chy11g01960 558 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 552 - -
Chy11g01960 558 SUPERFAMILY MFS general substrate transporter 6 542 IPR036259 -
Chy11g01960 558 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 552 - -
Chy11g01960 558 Gene3D MFS general substrate transporter like domains 292 532 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01110 Chy-Chr7:16055483 Chy11g01960 Chy-Chr11:25607842 0 dispersed
Chy11g01960 Chy-Chr11:25607842 Chy12g00344 Chy-Chr12:3621882 1.93E-86 dispersed
Chy11g01960 Chy-Chr11:25607842 Chy11g00271 Chy-Chr11:2518261 6.29E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01960 - - csv:101222963 1074.31