Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01970 | ATGGTGGTAGTATTTAGGTCGTTGCGCGCTCCAGCATCGATCCCAACATCCATCGCTACGCCCCGTGGTCATCTTCCTTCACTCTCAACCACCATTCACCTTGTTCTTCCTCAGATCTACACTCTCCGTCGCCCTCACTCTCAGTTGAAGATGCCATCGGCTCAAGATCCGTTCTATGTTGTAAAAGACGAGATTCAAGAATCTATCGATAAACTGCAATCCAGCTTTCACCAATGGGAAAGGATATCTTCTGATTCTGGAGAGAGAGTACAACAAACGAAAGAGTTGCTTGCTTCCTGTGAAAGCATTGAGTGGCAGGTGGATGAACTGGACAAAGCTATTGCTGTGGCAGCTAGAGATCCATCTTGGTATGGCATTGATAATGCAGAACTTGAAAAACGAAGGAGATGGACGAGTACAGCTAGGACGCAGGTTGGAAATGTTAAGAAAGTAGTAGGAGCCGGTAAGGAGCAAACAGGAACTGCTAGTGCAAGTGGGATGCGTCGAGAATTGATGAGACTACCTAATGCACATGAAACAGATAGATCAAACTTATATTCAGCCCACCAAGCAAATGATGACTTCATCACATCCGAATCAGACAGACAGCTGCTTCTAATAAAGCAGCAGGATGAAGAGTTGGATGAGTTGAGTGCAAGCGTGGAGAGAATTGGAGGTGTTGGGCTTACAATACACGAAGAGCTCCTTGCACAGGACAAAATTATCGACGACCTAGGAATGGAAATGGACAGTACTTCAAATCGTCTTGATTTTGTACAGGTACGGCGCCAAAATATTTCCCCCAGCCTAAGACCGCCGATTGATGAAAGAGACGAACAGTTCTTGCTGCTAAACCTCTATGGGAGTAACGTCAAACATACTCTGAGAGCTTGCTTCGCCTCCGATGTTGATCAGTGA | 918 | 45.86 | MVVVFRSLRAPASIPTSIATPRGHLPSLSTTIHLVLPQIYTLRRPHSQLKMPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWQVDELDKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQTGTASASGMRRELMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQVRRQNISPSLRPPIDERDEQFLLLNLYGSNVKHTLRACFASDVDQ* | 306 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 25688512 | 25693370 | + | Chy11G205500.1 | Chy11g01970 | 237731 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01970 | 305 | PANTHER | SYNTAXIN PROTEIN | 51 | 263 | - | - | |
Chy11g01970 | 305 | Gene3D | - | 206 | 266 | - | - | |
Chy11g01970 | 305 | SUPERFAMILY | SNARE fusion complex | 203 | 264 | - | - | |
Chy11g01970 | 305 | SMART | tSNARE_6 | 199 | 266 | IPR000727 | - | |
Chy11g01970 | 305 | Gene3D | - | 52 | 154 | - | - | |
Chy11g01970 | 305 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 204 | 266 | IPR000727 | - | |
Chy11g01970 | 305 | CDD | SNARE_Qc | 207 | 262 | - | - | |
Chy11g01970 | 305 | Pfam | Syntaxin 6, N-terminal | 56 | 149 | IPR015260 | GO:0016020|GO:0048193 | |
Chy11g01970 | 305 | ProSitePatterns | Syntaxin / epimorphin family signature. | 210 | 249 | IPR006012 | GO:0005484|GO:0006886|GO:0016020 | |
Chy11g01970 | 305 | PANTHER | SYNTAXIN | 51 | 263 | IPR045242 | - | |
Chy11g01970 | 305 | SUPERFAMILY | t-snare proteins | 55 | 150 | IPR010989 | GO:0016020|GO:0016192 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01970 | K08500 | - | csv:101212527 | 405.601 |