Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01970 ATGGTGGTAGTATTTAGGTCGTTGCGCGCTCCAGCATCGATCCCAACATCCATCGCTACGCCCCGTGGTCATCTTCCTTCACTCTCAACCACCATTCACCTTGTTCTTCCTCAGATCTACACTCTCCGTCGCCCTCACTCTCAGTTGAAGATGCCATCGGCTCAAGATCCGTTCTATGTTGTAAAAGACGAGATTCAAGAATCTATCGATAAACTGCAATCCAGCTTTCACCAATGGGAAAGGATATCTTCTGATTCTGGAGAGAGAGTACAACAAACGAAAGAGTTGCTTGCTTCCTGTGAAAGCATTGAGTGGCAGGTGGATGAACTGGACAAAGCTATTGCTGTGGCAGCTAGAGATCCATCTTGGTATGGCATTGATAATGCAGAACTTGAAAAACGAAGGAGATGGACGAGTACAGCTAGGACGCAGGTTGGAAATGTTAAGAAAGTAGTAGGAGCCGGTAAGGAGCAAACAGGAACTGCTAGTGCAAGTGGGATGCGTCGAGAATTGATGAGACTACCTAATGCACATGAAACAGATAGATCAAACTTATATTCAGCCCACCAAGCAAATGATGACTTCATCACATCCGAATCAGACAGACAGCTGCTTCTAATAAAGCAGCAGGATGAAGAGTTGGATGAGTTGAGTGCAAGCGTGGAGAGAATTGGAGGTGTTGGGCTTACAATACACGAAGAGCTCCTTGCACAGGACAAAATTATCGACGACCTAGGAATGGAAATGGACAGTACTTCAAATCGTCTTGATTTTGTACAGGTACGGCGCCAAAATATTTCCCCCAGCCTAAGACCGCCGATTGATGAAAGAGACGAACAGTTCTTGCTGCTAAACCTCTATGGGAGTAACGTCAAACATACTCTGAGAGCTTGCTTCGCCTCCGATGTTGATCAGTGA 918 45.86 MVVVFRSLRAPASIPTSIATPRGHLPSLSTTIHLVLPQIYTLRRPHSQLKMPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDSGERVQQTKELLASCESIEWQVDELDKAIAVAARDPSWYGIDNAELEKRRRWTSTARTQVGNVKKVVGAGKEQTGTASASGMRRELMRLPNAHETDRSNLYSAHQANDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLTIHEELLAQDKIIDDLGMEMDSTSNRLDFVQVRRQNISPSLRPPIDERDEQFLLLNLYGSNVKHTLRACFASDVDQ* 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25688512 25693370 + Chy11G205500.1 Chy11g01970 237731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01970 305 PANTHER SYNTAXIN PROTEIN 51 263 - -
Chy11g01970 305 Gene3D - 206 266 - -
Chy11g01970 305 SUPERFAMILY SNARE fusion complex 203 264 - -
Chy11g01970 305 SMART tSNARE_6 199 266 IPR000727 -
Chy11g01970 305 Gene3D - 52 154 - -
Chy11g01970 305 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 204 266 IPR000727 -
Chy11g01970 305 CDD SNARE_Qc 207 262 - -
Chy11g01970 305 Pfam Syntaxin 6, N-terminal 56 149 IPR015260 GO:0016020|GO:0048193
Chy11g01970 305 ProSitePatterns Syntaxin / epimorphin family signature. 210 249 IPR006012 GO:0005484|GO:0006886|GO:0016020
Chy11g01970 305 PANTHER SYNTAXIN 51 263 IPR045242 -
Chy11g01970 305 SUPERFAMILY t-snare proteins 55 150 IPR010989 GO:0016020|GO:0016192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01970 K08500 - csv:101212527 405.601