Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy11g01986 | ATGAGTGCCGGCGAAGGCGGCGGAGGGCCCTGCGGCGCCTGCAAGTTTTTGCGGAGAAAGTGTGTGAAAGGCTGCATTTTCGCACCCTATTTCGACTCTGATCAAGGCGCCGCCCACTTCGCCGCTGTTCATAAGGTGTTTGGAGCTAGCAATGCCTCTAAGCTCCTCCACCGCATCCCACCTCCCAAACGTCTCGACGCTTGCGTTACGCTTTGTTATGAAGCTCTCTCTAGGGTTCGAGACCCTGTCTACGGTTGCGTTTCTCAAATTTTCTCCCTCCAACAACAGGTAGTGAATTTGCAGGCAGAGCTAGCATACATTCAGGCTAAACTTTCCACCTTGCAGCGGTTATTTCCACCGCCACTACACACCCCGTCACCCACCACTTGCAACACTCCGCTACCAGAAGCGATCCCGGACCCGGACATGGGTTTGCTTTCTAATGTTCCAATGCTCCTTGACCCCCTACAAACCCATCTAGGTTGTAATGAAATGACAAATAGCTTTCTGAACCCAGTTGATTATCAAGATCAGATGGATGAAGATGGTGGTCTTCAATCTTTGGCTAGAGAATTCGTCTCGAGGTGCTTGCCTGGAGTACGAATCCGGCCGCCATGCTCACAGATTTAA | 630 | 51.59 | MSAGEGGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLHRIPPPKRLDACVTLCYEALSRVRDPVYGCVSQIFSLQQQVVNLQAELAYIQAKLSTLQRLFPPPLHTPSPTTCNTPLPEAIPDPDMGLLSNVPMLLDPLQTHLGCNEMTNSFLNPVDYQDQMDEDGGLQSLAREFVSRCLPGVRIRPPCSQI* | 210 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 25775513 | 25778393 | - | Chy11G205660.1 | Chy11g01986 | 237747 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy11g01986 | 209 | Pfam | Lateral organ boundaries (LOB) domain | 10 | 108 | IPR004883 | - | |
Chy11g01986 | 209 | ProSiteProfiles | LOB domain profile. | 9 | 111 | IPR004883 | - | |
Chy11g01986 | 209 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 19 | 1 | 198 | - | - | |
Chy11g01986 | 209 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 1 | 198 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy06g00237 | Chy11g01986 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy11g01986 | Chy-Chr11:25775513 | Chy11g01024 | Chy-Chr11:14506810 | 1.46E-37 | dispersed | |
Chy11g01986 | Chy-Chr11:25775513 | Chy11g01987 | Chy-Chr11:25787609 | 2.04E-52 | tandem | |
Chy11g01986 | Chy-Chr11:25775513 | Chy06g00237 | Chy-Chr6:1572197 | 1.09E-51 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
18804 | PF03195 | LOB | 5.30E-36 | No_clan | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy11g01986 | - | - | csv:101220840 | 415.231 |