Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01986 ATGAGTGCCGGCGAAGGCGGCGGAGGGCCCTGCGGCGCCTGCAAGTTTTTGCGGAGAAAGTGTGTGAAAGGCTGCATTTTCGCACCCTATTTCGACTCTGATCAAGGCGCCGCCCACTTCGCCGCTGTTCATAAGGTGTTTGGAGCTAGCAATGCCTCTAAGCTCCTCCACCGCATCCCACCTCCCAAACGTCTCGACGCTTGCGTTACGCTTTGTTATGAAGCTCTCTCTAGGGTTCGAGACCCTGTCTACGGTTGCGTTTCTCAAATTTTCTCCCTCCAACAACAGGTAGTGAATTTGCAGGCAGAGCTAGCATACATTCAGGCTAAACTTTCCACCTTGCAGCGGTTATTTCCACCGCCACTACACACCCCGTCACCCACCACTTGCAACACTCCGCTACCAGAAGCGATCCCGGACCCGGACATGGGTTTGCTTTCTAATGTTCCAATGCTCCTTGACCCCCTACAAACCCATCTAGGTTGTAATGAAATGACAAATAGCTTTCTGAACCCAGTTGATTATCAAGATCAGATGGATGAAGATGGTGGTCTTCAATCTTTGGCTAGAGAATTCGTCTCGAGGTGCTTGCCTGGAGTACGAATCCGGCCGCCATGCTCACAGATTTAA 630 51.59 MSAGEGGGGPCGACKFLRRKCVKGCIFAPYFDSDQGAAHFAAVHKVFGASNASKLLHRIPPPKRLDACVTLCYEALSRVRDPVYGCVSQIFSLQQQVVNLQAELAYIQAKLSTLQRLFPPPLHTPSPTTCNTPLPEAIPDPDMGLLSNVPMLLDPLQTHLGCNEMTNSFLNPVDYQDQMDEDGGLQSLAREFVSRCLPGVRIRPPCSQI* 210
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25775513 25778393 - Chy11G205660.1 Chy11g01986 237747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01986 209 Pfam Lateral organ boundaries (LOB) domain 10 108 IPR004883 -
Chy11g01986 209 ProSiteProfiles LOB domain profile. 9 111 IPR004883 -
Chy11g01986 209 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 1 198 - -
Chy11g01986 209 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 198 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy06g00237 Chy11g01986 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01986 Chy-Chr11:25775513 Chy11g01024 Chy-Chr11:14506810 1.46E-37 dispersed
Chy11g01986 Chy-Chr11:25775513 Chy11g01987 Chy-Chr11:25787609 2.04E-52 tandem
Chy11g01986 Chy-Chr11:25775513 Chy06g00237 Chy-Chr6:1572197 1.09E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
18804 PF03195 LOB 5.30E-36 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01986 - - csv:101220840 415.231