Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g01989 ATGGATGGAATTACACCCCACAATCGCCCTCTTCCTCCTCCTTTCCTCTCCAAAGATCTCCATCTCCACCATGGATTATTCCACGCTCACCACCAAAACTCCGACGACGACCATACCCCCGGACCTAAGAGAGACAGGGACTCCGACGACAACCCCACTATGGACGACGACACCAAAGAATTATCCAACTCTTCTTCTCGTCGCCCACGTGGCCGACCAGCCGGTTCCAAAAACAAGCCAAAGCCACCTATTATTATCACTAGAGATAGCGCCAACGCCCTCAGATCTCATCTCATCGAAATCTCCACCGCCTCCGACATCGTCGATTCCCTCGCCACCTTCGCACGCCGTCGCCAGCGGGGTGTTTGTATTCTTAGCGCCACTGGAACCGTCGCCAACGTCACTCTCCGCCAGCCCTCTTCCCCCGGCGCTGTCATCACCTTACCTGGCAGATTTGAAATTCTCTCCCTCTCAGGCTCTTTCCTCCCACCCCCGGCTCCCCCAGCAGCCTCCGGTCTTACCGTTTACTTGGCTGGCGGGCAGGGGCAGGTAGTCGGTGGGAATGTTATCGGCCCACTTTCGGCATCTGGACCGGTGATTATCATGGCCGCTTCTTTTGGTAATGCTGCGTATGAGCGGCTACCTATTGATGATGAGGATGAAACTTCACCGGCGGCGGATCAGATGGCGGGACAACAGGCGGCTGCAGCACCACCGCCGCCCCAATTGTTGGGGGATCCTAATGGGGGATTGTTTCATGGTATGGCGCAGAATGTTGTGAATTCTTCATGTCAATTGCCGGGGGAAGCAGCGGCGGCGTTTTGGGGAGGAGGTCGGCCACCGTATTGA 849 56.54 MDGITPHNRPLPPPFLSKDLHLHHGLFHAHHQNSDDDHTPGPKRDRDSDDNPTMDDDTKELSNSSSRRPRGRPAGSKNKPKPPIIITRDSANALRSHLIEISTASDIVDSLATFARRRQRGVCILSATGTVANVTLRQPSSPGAVITLPGRFEILSLSGSFLPPPAPPAASGLTVYLAGGQGQVVGGNVIGPLSASGPVIIMAASFGNAAYERLPIDDEDETSPAADQMAGQQAAAAPPPPQLLGDPNGGLFHGMAQNVVNSSCQLPGEAAAAFWGGGRPPY* 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25805445 25806293 + Chy11G205690.1 Chy11g01989 237750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g01989 282 MobiDBLite consensus disorder prediction 219 250 - -
Chy11g01989 282 Gene3D - 94 223 - -
Chy11g01989 282 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 207 IPR005175 -
Chy11g01989 282 MobiDBLite consensus disorder prediction 28 66 - -
Chy11g01989 282 ProSiteProfiles PPC domain profile profile. 91 229 IPR005175 -
Chy11g01989 282 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 5 282 IPR014476 GO:0003680
Chy11g01989 282 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 219 - -
Chy11g01989 282 CDD DUF296 95 206 IPR005175 -
Chy11g01989 282 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 5 282 - -
Chy11g01989 282 MobiDBLite consensus disorder prediction 28 85 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00563 Chy-Chr1:4028642 Chy11g01989 Chy-Chr11:25805445 1.01E-54 dispersed
Chy06g00491 Chy-Chr6:3305545 Chy11g01989 Chy-Chr11:25805445 1.03E-67 dispersed
Chy11g01953 Chy-Chr11:25567509 Chy11g01989 Chy-Chr11:25805445 4.01E-62 dispersed
Chy11g01989 Chy-Chr11:25805445 Chy06g00234 Chy-Chr6:1550149 4.87E-81 wgd
Chy11g01989 Chy-Chr11:25805445 Chy09g01146 Chy-Chr9:13721525 1.18E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g01989 - - csv:101220133 486.108