Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy11g02001 ATGGATAATTACGGTTCTTCATCTCCATATCCATATCACAATCCTTACCCATACCCTCGTCCAGTTCCTCCCCAATACCCACCTCCTTCTCAATATCCACCTCCTTCTCAGTATCCTCCTCCTCATTACACACATCCAAATTCAGATCCATATGCTCCTCCTTCTTACCCTTACCCCTATAATAATCCTTCACATCCCTCACCATTTGCATATCCCCCACCCCCATCTCATTCTGGCCCTGTTGAGTATTTTTCACACCCACCCCCACATTCTTCCCCTCTACCTTACCCATATTCTTACTCTGATGCCTCATCCACTAATGCTGCTGCTAGGCCCTCTATTCAATATCATAACAGTTTCCTACCTGGTTCATCCCCATATCGATATCAAGAATCTAGTGCCTACCCTCCACCTGAAACTCAATACCCACCACCCCCTTCACGAGTCAATAGCTTCTCTGGCCACTATAGGAATGATAGCACCGACTCCGTCTCATCTGTCGCTTCTGCATACCCACCTCTGGATGACCTTTTGGGCAATGTACATTTATCTGATCATCAACCAACTGCTCCTGCATCACCTCCTGCACCTGCTGCAGCACCTTCACCTGCACAGCCTTCAGCTTCGTTATTGGCTAATTCACCTCAAAGTGCTAGATATGATCGCCGTGACCGATTTTATGGCTTTCCAAATTCATCCTTTTCTAGTTTCGACACGGGGCATTCAGATCAAATGATTCCATCCAAACAACCTTCGTTTTCCCATTCAAGCTCATTCAGTGGGTCTCAACAGAACTTGCAGATTGTTCCACTGCATGGTAAAGCATCTTTGAAAGTTTTGCTGTTGCATGGAAACTTAGAAATTTGGGTTAATGAGGCCAAAAATCTTCCAAATATGGACATGTTTCACAAAACCTTGGGGGATATGTTTGCAAAATTGCCTGGGAACATGAGCAACAAAATTGAAGGACACGTGAGTCATAAGATCACTAGTGATCCTTATGTATCGATCAATGTAGCAAATGCAGTAATTGGGAGAACTTTTGTTATAAGCAACAATGAAAATCCTGTATGGAGGCAACATTTCTATGTTCCCGTTGCACATTATGCTGCTGAAGTAGTTTTTGTCGTTAAAGACAGTGATGTTGTTGGTTCACAGCTAATAGGAACTGTGGCAGTTCCTGCTGAACAAATATATTCAGGGTCTATGGTTGAGGGAACCTTCCCAATCCTACTTGGTGGGAAGCCATGTAAGCCTGGAGCTGCTCTAAGTATTTCTATTCAATATACCCCAATGGATAGGCTTAGCACTTATCACCATGGAGTGGGAGCTGGCCCTGATTATCAGGGGGTTCCTGATACGTATTTTCCCCTCAGAAAGGGTGGAGCCGTCACTCTTTATCAAGATGCCCATGTTCCAGACGGACACCTTCCAAATTTGATGCTTGATAATGGTACGTACTATGTGCATGGGAAGTGTTGGCATGACATTTTTGATGCTGTACGACAGGCTCGCAGGTTAGTTTACATAACTGGGTGGTCAGTGTGGCACAAAGTGAAATTAGTTCGAGATACTGGCTATGGAACAGAGTGTACCCTTGGAGATCTTCTGAGGTCAAAGTCTCAGGAGGGAGTGAGAGTTTTGCTTCTTGTTTGGGACGATCCCACTTCTAGGAGCATTTTGGGTTATAAAACTGATGGTTTCATGCAAACCCATGATGAGGAAACTCGCCGTTTTTTCAAACACTCCTCTGTACAAGTGATACTTTGTCCTCGGATTGCTGGAAAACGACATAGCTGGGTTAAGCAAAAGGAAGTTGGAACTATATATACACATCATCAGAAAACAGTTATTGTGGATGCTGATGCTGGAAATAATAGAAGAAAGATTATAGCTTTTGTTGGAGGGCTTGATTTATGTGACGGGCGGTATGATACTCCATCACATCCCATATTTCGGACCCTTCAAACAATACACAAGGACGATTACCACAATCCTACATACACGGGTAGTGTTATTGGTTGTCCAAGAGAACCATGGCATGATCTACACAGCAAAATCGATGGTCCAGCAGCATATGATGTTCTGACTAACTTTGAGGAGCGATGGAGGAGGGCTTCAAAACCTCACGGGATAAAAAAGTTGAAATCATATGATGATGCTTTGCTGAGTATTGAAAGAATTCATGACATAGTTGGAATTTCTGAAGCGCACTGCACTAATGAAAATGACCCTGAATCATGGCATGTGCAGATTTTTCGGTCAATTGATTCAACTTCTGTTAAAGATTTCCCAAAGGAGCCAAAAGATGCCCCAAGCAAGAACCTCGTATGTGGAAAGAATGTGTTGATTGACATGAGTATACACACAGCCTACGTGAAAGCCATTCGAGCTGCGCAACATTACATTTATATAGAGAACCAGTATTTCATCGGGTCATCCTTCAATTGGAATTCAAATAAAGATATAGGTGCCAACAATTTGATTCCAATGGAAATTGCCCTTAAGATTGCTGATAAAATCAGAGCAAATGAAAGGTTTGCTGCATATATTGTCATCCCCATGTGGCCTGAGGGTGTTCCAACCGCTGCTGCCACTCAGAGAATACTATTTTGGCAGCAAAAAACGATGCAAATGATGTATGAGGTGATTTACAAGGCTTTGATGGAGGTTGGTCTTGAGGATGCATTCTCTCCACAAGACTATTTGAACTTCTTCTGCCTGGGAAATCGTGAGACTATGGATGGAAATGATCCTTTATGTTCTGGAAGTCCTAATGGAGAAAGCACTCCTCAGGCACTTAGTCGGAAAAGCAGAAGGTTTATGATATATGTTCACTCCAAAGGCATGATAGTTGACGACGAGTATGTGATTTTGGGATCTGCCAACATCAACCAGAGATCCATGGAAGGAACTAGAGACACTGAGATTGCTATGGGAGCCTATCAACCCCATTATACGTGGGCAAGGAAACTTTCACATCCACGTGGACAGATCTATGGATATAGGATGTCGTTGTGGGCGGAGCATATGGGAACTACCGAGGAGTGTTTCAACCACCCGGAGAGCCTAGAATGCGTGAAAAGAGTTAGAACAATGGGAGAATTAAACTGGAAACAGTTTGCTGCAGATGATGTAACAGAGATGAGAGGACACCTTCTGAAATACCCAGTTGAAGTTGATAGAAGAGGGAGAGTAAGATCTCTTCCTGGTCATGAAAATTTTCCAGATGTTGGAGGAAAAATTGTTGGTTCATTTCTTGGCATCCAGGAGAACCTCACTATCTAA 3288 43.22 MDNYGSSSPYPYHNPYPYPRPVPPQYPPPSQYPPPSQYPPPHYTHPNSDPYAPPSYPYPYNNPSHPSPFAYPPPPSHSGPVEYFSHPPPHSSPLPYPYSYSDASSTNAAARPSIQYHNSFLPGSSPYRYQESSAYPPPETQYPPPPSRVNSFSGHYRNDSTDSVSSVASAYPPLDDLLGNVHLSDHQPTAPASPPAPAAAPSPAQPSASLLANSPQSARYDRRDRFYGFPNSSFSSFDTGHSDQMIPSKQPSFSHSSSFSGSQQNLQIVPLHGKASLKVLLLHGNLEIWVNEAKNLPNMDMFHKTLGDMFAKLPGNMSNKIEGHVSHKITSDPYVSINVANAVIGRTFVISNNENPVWRQHFYVPVAHYAAEVVFVVKDSDVVGSQLIGTVAVPAEQIYSGSMVEGTFPILLGGKPCKPGAALSISIQYTPMDRLSTYHHGVGAGPDYQGVPDTYFPLRKGGAVTLYQDAHVPDGHLPNLMLDNGTYYVHGKCWHDIFDAVRQARRLVYITGWSVWHKVKLVRDTGYGTECTLGDLLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGFMQTHDEETRRFFKHSSVQVILCPRIAGKRHSWVKQKEVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPSHPIFRTLQTIHKDDYHNPTYTGSVIGCPREPWHDLHSKIDGPAAYDVLTNFEERWRRASKPHGIKKLKSYDDALLSIERIHDIVGISEAHCTNENDPESWHVQIFRSIDSTSVKDFPKEPKDAPSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWNSNKDIGANNLIPMEIALKIADKIRANERFAAYIVIPMWPEGVPTAAATQRILFWQQKTMQMMYEVIYKALMEVGLEDAFSPQDYLNFFCLGNRETMDGNDPLCSGSPNGESTPQALSRKSRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHYTWARKLSHPRGQIYGYRMSLWAEHMGTTEECFNHPESLECVKRVRTMGELNWKQFAADDVTEMRGHLLKYPVEVDRRGRVRSLPGHENFPDVGGKIVGSFLGIQENLTI* 1096
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25893372 25902274 + Chy11G205810.1 Chy11g02001 237762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy11g02001 1095 Gene3D C2 domain 279 422 IPR035892 -
Chy11g02001 1095 MobiDBLite consensus disorder prediction 146 168 - -
Chy11g02001 1095 SUPERFAMILY Phospholipase D/nuclease 746 1027 - -
Chy11g02001 1095 MobiDBLite consensus disorder prediction 97 136 - -
Chy11g02001 1095 Gene3D Endonuclease Chain A 485 722 - -
Chy11g02001 1095 SMART C2_3c 285 407 IPR000008 -
Chy11g02001 1095 MobiDBLite consensus disorder prediction 238 259 - -
Chy11g02001 1095 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 608 643 IPR001736 GO:0003824
Chy11g02001 1095 PANTHER PHOSPHOLIPASE D ALPHA 1 187 1095 - -
Chy11g02001 1095 SMART pld_4 608 643 IPR001736 GO:0003824
Chy11g02001 1095 SMART pld_4 941 968 IPR001736 GO:0003824
Chy11g02001 1095 MobiDBLite consensus disorder prediction 12 95 - -
Chy11g02001 1095 Gene3D Endonuclease Chain A 754 991 - -
Chy11g02001 1095 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 282 432 IPR035892 -
Chy11g02001 1095 MobiDBLite consensus disorder prediction 1 216 - -
Chy11g02001 1095 SUPERFAMILY Phospholipase D/nuclease 449 708 - -
Chy11g02001 1095 ProSiteProfiles C2 domain profile. 262 408 IPR000008 -
Chy11g02001 1095 PANTHER PHOSPHOLIPASE D 187 1095 IPR015679 -
Chy11g02001 1095 Pfam C2 domain 284 410 IPR000008 -
Chy11g02001 1095 Pfam Phospholipase D C terminal 1015 1085 IPR024632 -
Chy11g02001 1095 CDD C2_plant_PLD 278 430 - -
Chy11g02001 1095 Pfam Phospholipase D Active site motif 609 643 IPR001736 GO:0003824
Chy11g02001 1095 Pfam Phospholipase D Active site motif 942 968 IPR001736 GO:0003824
Chy11g02001 1095 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 941 968 IPR001736 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01048 Chy-Chr3:13966886 Chy11g02001 Chy-Chr11:25893372 0 dispersed
Chy03g01122 Chy-Chr3:14515013 Chy11g02001 Chy-Chr11:25893372 0 dispersed
Chy06g01975 Chy-Chr6:23784904 Chy11g02001 Chy-Chr11:25893372 0 dispersed
Chy07g01611 Chy-Chr7:20229345 Chy11g02001 Chy-Chr11:25893372 0 dispersed
Chy11g02001 Chy-Chr11:25893372 Chy11g01535 Chy-Chr11:21916084 6.09E-16 dispersed
Chy11g02001 Chy-Chr11:25893372 Chy01g02000 Chy-Chr1:24975703 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy11g02001 K01115 - csv:101218942 2037.69