Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy12g00185 | ATGGAGGAAGATAACAGTGGTCTTCTTATTCAGAGTTTGATCGATGCTGTTAATGAAATTGCTTGGATCTCGGATTTTAGGTATACTGTTAAGAAACAGTATAGTAATTTGTCTAGGAGATTGAAGCTTTTGATTCCAATGTTTGAAGAGATTAGAGATGGTAAAGACCGTATTACTGAAGATACTCTTAAGGCTCTTGTTTTGTTGAAAGAAGCTCTTGAATCTGCTAAGAAGTTGCTCAGATTTGGCAGCGAAGGGAGTAAGATTTTCTTGGCTGTAGAGAGGGAGCAAATAATGAATAAATTTCACGAGGTAACTGCTCAGTTGGAACAAGCGTTGGAAGGAATAGCCTATGATAAACTAGATATATCCGATGAAGTTAAAGAGCAGGTTGAGCTTGTTCTTGCTCAATTCAGAAGGGCCAGAGGCAGGGCCGAAGCTCCTGACTCTGAGCTGTCGGAAGATATCCTTGCCCTTAACAATATGAGCAATGATTCTTCCATAGATCAAGACCGCCTGAGGAGACTGTCCGAAAAATTACAGTTGATAGGAATATCCGATCTTACACAAGAATCAATAGCTTTGCATGAGATGGTTGCTGCTACTGATGGTGATCCAGGTCAAAGCATTGAGAAGATGGCAGGGCTGCTAAAGAAAATAAAAGATTATGTGCAAACGGAGAACCTCGAAACGGACGATCCTAGTAGAGAAAAGAGTCCTCCAGCAAGTTGTAGTGGACATGTATCCAATGATAAAAATAACAAGACCCCAATTATACCAGATGATTTTCGCTGCCCAATTTCCCTGGAGTTGATGAGAGATCCTGTCATTGTCTCAACTGGACAGACCTATGAACGTTCCTGCATTGAGAAGTGGCTTGGAGCAGGGCATGGGACATGTCCAAAGACACAACAGAACCTCTCAAGCACTACTCTTACCCCGAATTATGTGTTGCGTAGCCTTATAGCCCAATGGTGTGAGGCCAACGGTATTGAACCACCAAAACGACCCAACAGCGCTCGACCATGTAGAAGCTCGTCATCTTGCTCAGCTGCTGAACGCACAAAAATTGATATTCTTCTTTGCAAACTCGCTTCTGGAAATCCGGAAGATCAACGATCTGCAGCCGGTGAGATTCGACTACTTGCAAAACGAAATGCAGATAATCGTGTTGCTATTGCTGAGGCTGGTGCTATTCCTCTCCTTGTTGGCCTTCTTTCAACTCCGGACTCCCGTGTTCAAGAGCATGCTGTGACAGCACTTCTTAACCTCTCTATATGTGAGGACAACAAGGGAAGCATCATTTCATCTGGGGCAGTTCCTGGTATCGTTCTCGTGCTAAAAAAGGGAAGCATGGAAGCACGGGAAAATGCAGCAGCCACTCTTTTCAGCCTTTCGGTTATCGATGAAAACAAAGTTAGAATTGGCGCCTCCGGAGCTATCCCACCTCTCGTTACACTGCTTAGTGAAGGCACACAAAGAGGTAAGAAAGATGCTGCAACTGCACTTTTCAACTTATGCATCTACCAAGGAAACAAAGGAAGGGCAGTAAGAGCTGGTGTAGTTCCAACCTTAATGCAGCTTCTCACCGAGCCCGGAACCGGAATGGTAGATGAAGCCTTAGCTATCTTAGCTATACTCGCTAGCCACTCCGAAGGGAAAGGTGCCATCAGATCTGCAAAGGCAGTGCCAGTTTTGGTAGATGTGATTGGGACAGGATCCCCCAGGAACAGAGAAAATGCGGCTGCAGTTCTCGTGCACCTCTGCTCGGGAGACGAGCAACTCCTAGTAGAGGCCAGAGAACTTGGAGTGATTAGTTCATTGATAGATTTGGCACGCAATGGCACAGATAGAGGAAAGCGAAAAGCTTCACAGTTGCTTGAACGAATAAACCGACTGTTTGAGCATGCAGCAGCAAATCTGGAAGAGGTTCGGGTGCTTCGGTTGCAAGCGTCGGAATCTCAACCTCAAAGCCAGCCATCACAATCAACCTCAACAACGGAAGTCGTTGGTAGCTGA | 2019 | 45.32 | MEEDNSGLLIQSLIDAVNEIAWISDFRYTVKKQYSNLSRRLKLLIPMFEEIRDGKDRITEDTLKALVLLKEALESAKKLLRFGSEGSKIFLAVEREQIMNKFHEVTAQLEQALEGIAYDKLDISDEVKEQVELVLAQFRRARGRAEAPDSELSEDILALNNMSNDSSIDQDRLRRLSEKLQLIGISDLTQESIALHEMVAATDGDPGQSIEKMAGLLKKIKDYVQTENLETDDPSREKSPPASCSGHVSNDKNNKTPIIPDDFRCPISLELMRDPVIVSTGQTYERSCIEKWLGAGHGTCPKTQQNLSSTTLTPNYVLRSLIAQWCEANGIEPPKRPNSARPCRSSSSCSAAERTKIDILLCKLASGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRVQEHAVTALLNLSICEDNKGSIISSGAVPGIVLVLKKGSMEARENAAATLFSLSVIDENKVRIGASGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGRAVRAGVVPTLMQLLTEPGTGMVDEALAILAILASHSEGKGAIRSAKAVPVLVDVIGTGSPRNRENAAAVLVHLCSGDEQLLVEARELGVISSLIDLARNGTDRGKRKASQLLERINRLFEHAAANLEEVRVLRLQASESQPQSQPSQSTSTTEVVGS* | 673 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 2245357 | 2249527 | - | Chy12G207850.1 | Chy12g00185 | 237966 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy12g00185 | 672 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 397 | 439 | IPR000225 | GO:0005515 | |
| Chy12g00185 | 672 | MobiDBLite | consensus disorder prediction | 242 | 256 | - | - | |
| Chy12g00185 | 672 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 259 | 332 | IPR013083 | - | |
| Chy12g00185 | 672 | MobiDBLite | consensus disorder prediction | 650 | 672 | - | - | |
| Chy12g00185 | 672 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 520 | 562 | IPR000225 | GO:0005515 | |
| Chy12g00185 | 672 | PANTHER | U BOX DOMAIN-CONTAINING | 7 | 647 | - | - | |
| Chy12g00185 | 672 | CDD | RING-Ubox_PUB | 263 | 305 | IPR045210 | - | |
| Chy12g00185 | 672 | MobiDBLite | consensus disorder prediction | 228 | 257 | - | - | |
| Chy12g00185 | 672 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 7 | 647 | - | - | |
| Chy12g00185 | 672 | SUPERFAMILY | ARM repeat | 357 | 630 | IPR016024 | - | |
| Chy12g00185 | 672 | SMART | arm_5 | 509 | 549 | IPR000225 | GO:0005515 | |
| Chy12g00185 | 672 | SMART | arm_5 | 592 | 632 | IPR000225 | GO:0005515 | |
| Chy12g00185 | 672 | SMART | arm_5 | 550 | 590 | IPR000225 | GO:0005515 | |
| Chy12g00185 | 672 | SMART | arm_5 | 427 | 467 | IPR000225 | GO:0005515 | |
| Chy12g00185 | 672 | SMART | arm_5 | 386 | 426 | IPR000225 | GO:0005515 | |
| Chy12g00185 | 672 | SMART | arm_5 | 468 | 508 | IPR000225 | GO:0005515 | |
| Chy12g00185 | 672 | Pfam | Armadillo/beta-catenin-like repeat | 469 | 507 | IPR000225 | GO:0005515 | |
| Chy12g00185 | 672 | Pfam | Armadillo/beta-catenin-like repeat | 551 | 590 | IPR000225 | GO:0005515 | |
| Chy12g00185 | 672 | Pfam | Armadillo/beta-catenin-like repeat | 386 | 425 | IPR000225 | GO:0005515 | |
| Chy12g00185 | 672 | Gene3D | - | 336 | 494 | IPR011989 | - | |
| Chy12g00185 | 672 | Gene3D | - | 495 | 657 | IPR011989 | - | |
| Chy12g00185 | 672 | Gene3D | - | 9 | 118 | IPR036537 | GO:0007166 | |
| Chy12g00185 | 672 | SMART | Ubox_2 | 262 | 325 | IPR003613 | GO:0004842|GO:0016567 | |
| Chy12g00185 | 672 | Pfam | U-box domain | 259 | 329 | IPR003613 | GO:0004842|GO:0016567 | |
| Chy12g00185 | 672 | SUPERFAMILY | RING/U-box | 254 | 335 | - | - | |
| Chy12g00185 | 672 | ProSiteProfiles | U-box domain profile. | 258 | 332 | IPR003613 | GO:0004842|GO:0016567 |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy12g00185 | - | - | - | csv:101218572 | 1192.95 |
WGDs- Genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Chy11g01242 | Chy12g00185 | CCT |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy03g01088 | Chy-Chr3:14283989 | Chy12g00185 | Chy-Chr12:2245357 | 3.88E-27 | dispersed | |
| Chy03g01664 | Chy-Chr3:18421852 | Chy12g00185 | Chy-Chr12:2245357 | 2.44E-52 | dispersed | |
| Chy12g00056 | Chy-Chr12:498638 | Chy12g00185 | Chy-Chr12:2245357 | 1.50E-96 | dispersed | |
| Chy12g00185 | Chy-Chr12:2245357 | Chy12g01281 | Chy-Chr12:17336515 | 4.61E-87 | dispersed | |
| Chy02g00356 | Chy-Chr2:2295256 | Chy12g00185 | Chy-Chr12:2245357 | 1.62E-60 | transposed | |
| Chy02g00450 | Chy-Chr2:2836400 | Chy12g00185 | Chy-Chr12:2245357 | 3.70E-07 | transposed | |
| Chy02g01845 | Chy-Chr2:20755798 | Chy12g00185 | Chy-Chr12:2245357 | 3.90E-17 | transposed | |
| Chy03g00196 | Chy-Chr3:1826834 | Chy12g00185 | Chy-Chr12:2245357 | 5.24E-126 | transposed | |
| Chy03g00609 | Chy-Chr3:8656921 | Chy12g00185 | Chy-Chr12:2245357 | 1.50E-18 | transposed | |
| Chy03g00861 | Chy-Chr3:11831154 | Chy12g00185 | Chy-Chr12:2245357 | 1.36E-32 | transposed | |
| Chy03g01589 | Chy-Chr3:17917046 | Chy12g00185 | Chy-Chr12:2245357 | 9.59E-67 | transposed | |
| Chy04g00146 | Chy-Chr4:1320304 | Chy12g00185 | Chy-Chr12:2245357 | 1.92E-09 | transposed | |
| Chy04g00352 | Chy-Chr4:3125441 | Chy12g00185 | Chy-Chr12:2245357 | 4.03E-17 | transposed | |
| Chy04g00411 | Chy-Chr4:3669453 | Chy12g00185 | Chy-Chr12:2245357 | 2.64E-15 | transposed | |
| Chy04g00817 | Chy-Chr4:10644899 | Chy12g00185 | Chy-Chr12:2245357 | 2.07E-87 | transposed | |
| Chy05g00730 | Chy-Chr5:9934829 | Chy12g00185 | Chy-Chr12:2245357 | 1.56E-61 | transposed | |
| Chy06g00053 | Chy-Chr6:379928 | Chy12g00185 | Chy-Chr12:2245357 | 1.65E-13 | transposed | |
| Chy07g00624 | Chy-Chr7:5781457 | Chy12g00185 | Chy-Chr12:2245357 | 9.84E-06 | transposed | |
| Chy09g00867 | Chy-Chr9:11403672 | Chy12g00185 | Chy-Chr12:2245357 | 2.25E-132 | transposed | |
| Chy10g01080 | Chy-Chr10:15896281 | Chy12g00185 | Chy-Chr12:2245357 | 2.39E-15 | transposed | |
| Chy10g01301 | Chy-Chr10:17453715 | Chy12g00185 | Chy-Chr12:2245357 | 0 | transposed | |
| Chy11g00210 | Chy-Chr11:1971633 | Chy12g00185 | Chy-Chr12:2245357 | 8.07E-09 | transposed | |
| Chy11g00773 | Chy-Chr11:10806676 | Chy12g00185 | Chy-Chr12:2245357 | 1.49E-168 | transposed | |
| Chy11g01547 | Chy-Chr11:22018713 | Chy12g00185 | Chy-Chr12:2245357 | 3.59E-09 | transposed | |
| Chy11g01242 | Chy-Chr11:18538898 | Chy12g00185 | Chy-Chr12:2245357 | 0 | wgd |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi6g428 | . | Blo03g01237 | Bda02g00818 | . | . | Bpe08g01367 | Bma14g00501 | . | Cmo13g00131 | . | Cma01g00596 | Cma13g00132 | Car01g00541 | Car13g00102 | . | . | Cpe20g00814 | Bhi08g00620 | . | . | . | . | . | . | Cla02g01975 | Cam02g2095 | Cec02g2133 | Cco02g2163 | Clacu02g2083 | Cmu02g2020 | Cre02g2329 | . | . | Cone18ag0344 | Cone11ag1246 | Lsi02g01363 | Csa06g01498 | Chy11g01242 | Cme11g01284 | . | Blo14g00121 | Bda07g00590 | . | . | Bpe11g00764 | . | Bma11g00122 | Sed05g2955 | . | . | . | Cma20g00410 | . | Car20g00358 | . | . | Bhi10g00688 | Tan05g0378 | Cmetu11g2533 | . | . | . | . | Cla03g00152 | Cam03g0158 | Cec03g0157 | Cco03g0164 | Clacu03g0161 | Cmu03g0778 | Cre03g0473 | . | Csa01g02400 | Chy12g00185 | Cme12g00199 |
Syn-Families
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Chy04g01575 | . | 1 | 1043 | U-box Gene Family | AT5G15400 | 75.7 | 0.0e+00 | 1568.1 | |
| Chy11g00210 | . | 209 | 855 | U-box Gene Family | AT2G23140 | 66.0 | 6.6e-120 | 428.3 | |
| Chy03g01664 | . | 1 | 800 | U-box Gene Family | AT1G24330 | 55.4 | 5.2e-228 | 787.7 | |
| Chy10g00794 | . | 25 | 765 | U-box Gene Family | AT1G24330 | 57.7 | 4.7e-221 | 764.6 | |
| Chy03g01664 | . | 1 | 799 | U-box Gene Family | AT1G67530 | 55.2 | 3.5e-224 | 775.0 | |
| Chy10g00794 | . | 25 | 765 | U-box Gene Family | AT1G67530 | 56.3 | 7.9e-216 | 747.3 | |
| Chy02g00356 | . | 1 | 362 | U-box Gene Family | AT4G21350 | 62.1 | 1.0e-120 | 430.3 | |
| Chy04g00817 | . | 135 | 462 | U-box Gene Family | AT3G07360 | 54.4 | 2.2e-79 | 292.7 | |
| Chy09g00867 | . | 251 | 456 | U-box Gene Family | AT1G71020 | 53.1 | 3.1e-53 | 206.5 | |
| Chy10g01301 | . | 210 | 412 | U-box Gene Family | AT1G71020 | 51.9 | 8.7e-48 | 188.3 | |
| Chy12g00185 | CCT | 259 | 428 | U-box Gene Family | AT1G71020 | 57.8 | 1.5e-47 | 187.6 | |
| Chy12g00185 | CCT | 94 | 643 | U-box Gene Family | AT2G28830 | 57.9 | 1.7e-98 | 357.1 | |
| Chy12g00185 | CCT | 1 | 635 | U-box Gene Family | AT3G46510 | 68.3 | 2.0e-159 | 559.7 | |
| Chy11g01242 | CCT | 11 | 671 | U-box Gene Family | AT3G46510 | 64.0 | 8.6e-155 | 544.3 | |
| Chy10g01301 | . | 5 | 620 | U-box Gene Family | AT3G46510 | 58.5 | 1.3e-123 | 440.7 | |
| Chy10g01301 | . | 9 | 619 | U-box Gene Family | AT3G54850 | 69.1 | 1.2e-166 | 583.6 | |
| Chy11g01242 | CCT | 13 | 650 | U-box Gene Family | AT3G54850 | 55.2 | 2.9e-112 | 402.9 | |
| Chy12g00185 | CCT | 9 | 632 | U-box Gene Family | AT3G54850 | 55.2 | 1.1e-103 | 374.4 | |
| Chy11g00773 | . | 92 | 644 | U-box Gene Family | AT5G42340 | 64.6 | 4.9e-118 | 422.2 | |
| Chy08g00584 | . | 9 | 671 | U-box Gene Family | AT5G01830 | 57.9 | 2.1e-196 | 682.6 | |
| Chy12g00056 | . | 1 | 714 | U-box Gene Family | AT1G29340 | 67.3 | 7.5e-245 | 843.6 | |
| Chy06g01338 | . | 27 | 443 | U-box Gene Family | AT5G37490 | 51.6 | 1.3e-111 | 400.2 | |
| Chy08g00534 | . | 4 | 423 | U-box Gene Family | AT3G52450 | 50.8 | 5.2e-116 | 414.8 | |
| Chy05g00202 | CCT,ECH | 13 | 412 | U-box Gene Family | AT2G35930 | 51.9 | 1.4e-115 | 413.3 | |
| Chy08g00534 | . | 4 | 423 | U-box Gene Family | AT2G35930 | 50.4 | 5.4e-115 | 411.4 | |
| Chy04g01856 | . | 7 | 321 | U-box Gene Family | AT2G35930 | 50.9 | 3.7e-79 | 292.4 | |
| Chy06g01075 | . | 9 | 424 | U-box Gene Family | AT3G19380 | 64.2 | 2.7e-146 | 515.4 | |
| Chy06g01075 | . | 1 | 424 | U-box Gene Family | AT1G49780 | 64.3 | 2.1e-151 | 532.3 | |
| Chy02g01040 | . | 1 | 407 | U-box Gene Family | AT5G64660 | 54.7 | 1.0e-121 | 433.7 | |
| Chy02g01040 | . | 1 | 407 | U-box Gene Family | AT5G09800 | 50.8 | 2.0e-106 | 382.9 | |
| Chy07g00203 | . | 1 | 445 | U-box Gene Family | AT3G49810 | 63.2 | 1.8e-151 | 532.7 | |
| Chy03g01606 | . | 1 | 449 | U-box Gene Family | AT3G49810 | 61.0 | 2.6e-147 | 518.8 | |
| Chy03g01606 | . | 1 | 449 | U-box Gene Family | AT5G65920 | 61.5 | 1.9e-145 | 512.7 | |
| Chy07g00203 | . | 1 | 445 | U-box Gene Family | AT5G65920 | 61.9 | 4.1e-145 | 511.5 | |
| Chy06g00167 | CCT | 1 | 874 | U-box Gene Family | AT2G45910 | 51.3 | 9.6e-228 | 786.9 | |
| Chy09g01031 | . | 25 | 808 | U-box Gene Family | AT4G25160 | 52.4 | 3.4e-225 | 778.5 | |
| Chy09g00312 | . | 39 | 554 | U-box Gene Family | AT5G40140 | 55.4 | 7.8e-93 | 338.2 | |
| Chy02g02552 | . | 27 | 537 | U-box Gene Family | AT5G40140 | 51.6 | 8.6e-68 | 255.0 | |
| Chy03g00609 | . | 4 | 815 | U-box Gene Family | AT1G76390 | 60.6 | 2.3e-266 | 915.2 | |
| Chy03g00609 | . | 13 | 815 | U-box Gene Family | AT1G20780 | 61.1 | 1.0e-274 | 943.0 | |
| Chy10g00794 | . | 25 | 775 | U-box Gene Family | AT1G27910 | 62.6 | 2.2e-255 | 878.6 | |
| Chy03g01664 | . | 1 | 803 | U-box Gene Family | AT1G27910 | 58.5 | 1.2e-253 | 872.8 | |
| Chy02g00840 | . | 1 | 593 | U-box Gene Family | AT5G67530 | 74.2 | 4.0e-260 | 894.0 | |
| Chy04g01907 | . | 12 | 162 | U-box Gene Family | AT5G67530 | 50.3 | 8.8e-42 | 168.7 | |
| Chy06g00229 | . | 688 | 819 | U-box Gene Family | AT5G67530 | 56.1 | 1.4e-39 | 161.4 | |
| Chy09g01031 | . | 26 | 808 | U-box Gene Family | AT5G61550 | 50.5 | 1.6e-222 | 769.6 | |
| Chy06g00436 | . | 50 | 592 | U-box Gene Family | AT1G04510 | 70.7 | 7.4e-218 | 753.4 | |
| Chy06g00436 | . | 50 | 561 | U-box Gene Family | AT2G33340 | 69.6 | 5.6e-204 | 707.2 | |
| Chy04g00818 | . | 10 | 278 | U-box Gene Family | AT3G07370 | 66.5 | 1.3e-101 | 366.3 | |
| Chy04g01575 | . | 1 | 1043 | U-box Gene Family | AT5G15400 | 75.7 | 0.0e+00 | 1568.1 | |
| Chy11g00210 | . | 209 | 855 | U-box Gene Family | AT2G23140 | 66.0 | 6.6e-120 | 428.3 | |
| Chy03g01664 | . | 1 | 800 | U-box Gene Family | AT1G24330 | 55.4 | 5.2e-228 | 787.7 | |
| Chy10g00794 | . | 25 | 765 | U-box Gene Family | AT1G24330 | 57.7 | 4.7e-221 | 764.6 | |
| Chy03g01664 | . | 1 | 799 | U-box Gene Family | AT1G67530 | 55.2 | 3.5e-224 | 775.0 | |
| Chy10g00794 | . | 25 | 765 | U-box Gene Family | AT1G67530 | 56.3 | 7.9e-216 | 747.3 | |
| Chy02g00356 | . | 1 | 362 | U-box Gene Family | AT4G21350 | 62.1 | 1.0e-120 | 430.3 | |
| Chy04g00817 | . | 135 | 462 | U-box Gene Family | AT3G07360 | 54.4 | 2.2e-79 | 292.7 | |
| Chy09g00867 | . | 251 | 456 | U-box Gene Family | AT1G71020 | 53.1 | 3.1e-53 | 206.5 | |
| Chy10g01301 | . | 210 | 412 | U-box Gene Family | AT1G71020 | 51.9 | 8.7e-48 | 188.3 | |
| Chy12g00185 | CCT | 259 | 428 | U-box Gene Family | AT1G71020 | 57.8 | 1.5e-47 | 187.6 | |
| Chy12g00185 | CCT | 94 | 643 | U-box Gene Family | AT2G28830 | 57.9 | 1.7e-98 | 357.1 | |
| Chy12g00185 | CCT | 1 | 635 | U-box Gene Family | AT3G46510 | 68.3 | 2.0e-159 | 559.7 | |
| Chy11g01242 | CCT | 11 | 671 | U-box Gene Family | AT3G46510 | 64.0 | 8.6e-155 | 544.3 | |
| Chy10g01301 | . | 5 | 620 | U-box Gene Family | AT3G46510 | 58.5 | 1.3e-123 | 440.7 | |
| Chy10g01301 | . | 9 | 619 | U-box Gene Family | AT3G54850 | 69.1 | 1.2e-166 | 583.6 | |
| Chy11g01242 | CCT | 13 | 650 | U-box Gene Family | AT3G54850 | 55.2 | 2.9e-112 | 402.9 | |
| Chy12g00185 | CCT | 9 | 632 | U-box Gene Family | AT3G54850 | 55.2 | 1.1e-103 | 374.4 | |
| Chy11g00773 | . | 92 | 644 | U-box Gene Family | AT5G42340 | 64.6 | 4.9e-118 | 422.2 | |
| Chy08g00584 | . | 9 | 671 | U-box Gene Family | AT5G01830 | 57.9 | 2.1e-196 | 682.6 | |
| Chy12g00056 | . | 1 | 714 | U-box Gene Family | AT1G29340 | 67.3 | 7.5e-245 | 843.6 | |
| Chy06g01338 | . | 27 | 443 | U-box Gene Family | AT5G37490 | 51.6 | 1.3e-111 | 400.2 | |
| Chy08g00534 | . | 4 | 423 | U-box Gene Family | AT3G52450 | 50.8 | 5.2e-116 | 414.8 | |
| Chy05g00202 | CCT,ECH | 13 | 412 | U-box Gene Family | AT2G35930 | 51.9 | 1.4e-115 | 413.3 | |
| Chy08g00534 | . | 4 | 423 | U-box Gene Family | AT2G35930 | 50.4 | 5.4e-115 | 411.4 | |
| Chy04g01856 | . | 7 | 321 | U-box Gene Family | AT2G35930 | 50.9 | 3.7e-79 | 292.4 | |
| Chy06g01075 | . | 9 | 424 | U-box Gene Family | AT3G19380 | 64.2 | 2.7e-146 | 515.4 | |
| Chy06g01075 | . | 1 | 424 | U-box Gene Family | AT1G49780 | 64.3 | 2.1e-151 | 532.3 | |
| Chy02g01040 | . | 1 | 407 | U-box Gene Family | AT5G64660 | 54.7 | 1.0e-121 | 433.7 | |
| Chy02g01040 | . | 1 | 407 | U-box Gene Family | AT5G09800 | 50.8 | 2.0e-106 | 382.9 | |
| Chy07g00203 | . | 1 | 445 | U-box Gene Family | AT3G49810 | 63.2 | 1.8e-151 | 532.7 | |
| Chy03g01606 | . | 1 | 449 | U-box Gene Family | AT3G49810 | 61.0 | 2.6e-147 | 518.8 | |
| Chy03g01606 | . | 1 | 449 | U-box Gene Family | AT5G65920 | 61.5 | 1.9e-145 | 512.7 | |
| Chy07g00203 | . | 1 | 445 | U-box Gene Family | AT5G65920 | 61.9 | 4.1e-145 | 511.5 | |
| Chy06g00167 | CCT | 1 | 874 | U-box Gene Family | AT2G45910 | 51.3 | 9.6e-228 | 786.9 | |
| Chy09g01031 | . | 25 | 808 | U-box Gene Family | AT4G25160 | 52.4 | 3.4e-225 | 778.5 | |
| Chy09g00312 | . | 39 | 554 | U-box Gene Family | AT5G40140 | 55.4 | 7.8e-93 | 338.2 | |
| Chy02g02552 | . | 27 | 537 | U-box Gene Family | AT5G40140 | 51.6 | 8.6e-68 | 255.0 | |
| Chy03g00609 | . | 4 | 815 | U-box Gene Family | AT1G76390 | 60.6 | 2.3e-266 | 915.2 | |
| Chy03g00609 | . | 13 | 815 | U-box Gene Family | AT1G20780 | 61.1 | 1.0e-274 | 943.0 | |
| Chy10g00794 | . | 25 | 775 | U-box Gene Family | AT1G27910 | 62.6 | 2.2e-255 | 878.6 | |
| Chy03g01664 | . | 1 | 803 | U-box Gene Family | AT1G27910 | 58.5 | 1.2e-253 | 872.8 | |
| Chy02g00840 | . | 1 | 593 | U-box Gene Family | AT5G67530 | 74.2 | 4.0e-260 | 894.0 | |
| Chy04g01907 | . | 12 | 162 | U-box Gene Family | AT5G67530 | 50.3 | 8.8e-42 | 168.7 | |
| Chy06g00229 | . | 688 | 819 | U-box Gene Family | AT5G67530 | 56.1 | 1.4e-39 | 161.4 | |
| Chy09g01031 | . | 26 | 808 | U-box Gene Family | AT5G61550 | 50.5 | 1.6e-222 | 769.6 | |
| Chy06g00436 | . | 50 | 592 | U-box Gene Family | AT1G04510 | 70.7 | 7.4e-218 | 753.4 | |
| Chy06g00436 | . | 50 | 561 | U-box Gene Family | AT2G33340 | 69.6 | 5.6e-204 | 707.2 | |
| Chy04g00818 | . | 10 | 278 | U-box Gene Family | AT3G07370 | 66.5 | 1.3e-101 | 366.3 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0004307 | 2 | 2 | 3 | 2 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 1 | 1 | 43 |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chy12g00185 | Chy_Chr12 | FPKM | 290.490784 | 323.337372 | 84.591858 | 87.120827 | 50.646233 | 51.222275 | 48.949196 | 140.078979 | 154.460983 | 146.209564 |