Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00221 ATGGGTTGGCCTTACATCGGCGAAACCTTCAAACTCTACACCCAAAACCCAAACTCCTTCTTTTCCATTAGACAAAAAAGATATGGGGATGTTTTTAAGACACATATATTGGGTTGTCCTTGTGTGATGATTTCAAGTCCAAAGGCTGCAAGAGTAGTGCTTGTGAGTAAAGCTCATTTGTTCAAGCCAACTTATCCACCAAGTAAAGAGAGAATGATCGGTCCTCAAGCTTTGTTTTTTCATCAAGGTCCTTACCATTCTTATCTTAAGAAGTTGATTCAATCTTCCTTTTTGCCATCTGCCATTAAACACTCTATTTCTCAAATTGAGAACATTGTTCTTAACCTTCTGCCCTCTTGGAATAACTCCCAAATCAACACCTTGCAACAAATGAAAAAGTTTGCTTTCGACGTGGCGATGATATCAGCTTTCGGAGATCAACAAGATTTGGAAATTGAGAGAATCAAGCATCTGTACCAATGTCTTGAAAAAGGCTACAATTCTATGCCTCTCGATCTTCCCGGAACCCCTTTCCGTAAAGCAATGAAGGCAAGGAAGGTGTTGAGTGAGACATTGGGGAAAATGATAGAGAAGAGACGGCGGAACAAAGAGCATGGAGGTGGGTTGTTGGCAGTGCTACTCAGCGGTGGTGGTGGGGAGGAAGAAGAGAAAAAGAAGCTAAGTGATTCACAAATAGCGGATAATATAATAGGAGTAATATTTGCAGCACAAGACACAACAGCAAGTGTATTAACATGGATTCTTAAATATTTACATGACAATCACCACCTTCTAGAAGCTGTTAAGAAGGAGCAAGATGCAATTTATGAAAGAAAACTGTGCGAAGGGAAGCGTGGGCTTTCATGGGATGATACTAGGCGCATGCCTTTCACTAGTCGGGTGATCTTAGAGACCCTACGAAGAGCAAGTGTAGTGTCGTTCACATTTAGAGAAGCAGTAGAAGAAGTTGAATTTGAAGGATATTTAATCCCAAAAGGATGGAAAGTTCTTCCACTCTTCAGAACCATTCATCACTCTCCTGATTTTTTCCCACATCCCCACAACTTTGATCCTTCAAGATTCGAGGAGCCACCTAGACCGAACACGTACATGCCGTTTGGCAATGGAGTGCACTCGTGTCCAGGCAGTGAGATGGCTAAGCTTGAAATGCTTGTTCTTCTCCACCACCTCACCACCACTTACAGATGGAAAGTAGTGGGAGAGGAATCTGAAATACAATACGGTCCATTTCCTGTACCAAAAGGTGGCTTACCTATTAAAGTATATCCAAGGAAGAAGAAGATTACTTCTTTGAATTGA 1320 41.67 MGWPYIGETFKLYTQNPNSFFSIRQKRYGDVFKTHILGCPCVMISSPKAARVVLVSKAHLFKPTYPPSKERMIGPQALFFHQGPYHSYLKKLIQSSFLPSAIKHSISQIENIVLNLLPSWNNSQINTLQQMKKFAFDVAMISAFGDQQDLEIERIKHLYQCLEKGYNSMPLDLPGTPFRKAMKARKVLSETLGKMIEKRRRNKEHGGGLLAVLLSGGGGEEEEKKKLSDSQIADNIIGVIFAAQDTTASVLTWILKYLHDNHHLLEAVKKEQDAIYERKLCEGKRGLSWDDTRRMPFTSRVILETLRRASVVSFTFREAVEEVEFEGYLIPKGWKVLPLFRTIHHSPDFFPHPHNFDPSRFEEPPRPNTYMPFGNGVHSCPGSEMAKLEMLVLLHHLTTTYRWKVVGEESEIQYGPFPVPKGGLPIKVYPRKKKITSLN* 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2575770 2582551 + Chy12G208210.1 Chy12g00221 238002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00221 439 PRINTS E-class P450 group I signature 251 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00221 439 PRINTS E-class P450 group I signature 25 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00221 439 PRINTS E-class P450 group I signature 370 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00221 439 PRINTS E-class P450 group I signature 380 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00221 439 PRINTS E-class P450 group I signature 339 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00221 439 PRINTS E-class P450 group I signature 231 248 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00221 439 PRINTS E-class P450 group I signature 299 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00221 439 PANTHER CYTOCHROME P450 26 1 429 - -
Chy12g00221 439 PRINTS P450 superfamily signature 242 259 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00221 439 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00221 439 PRINTS P450 superfamily signature 300 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00221 439 PRINTS P450 superfamily signature 371 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00221 439 Pfam Cytochrome P450 3 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00221 439 Gene3D Cytochrome P450 1 430 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00221 439 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 373 382 IPR017972 GO:0005506|GO:0016705
Chy12g00221 439 PANTHER ABSCISIC ACID 8'-HYDROXYLASE 2 1 429 - -
Chy12g00221 439 SUPERFAMILY Cytochrome P450 2 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01098 Chy-Chr7:15945213 Chy12g00221 Chy-Chr12:2575770 0 dispersed
Chy12g00221 Chy-Chr12:2575770 Chy07g01292 Chy-Chr7:17581445 4.48E-77 dispersed
Chy12g00221 Chy-Chr12:2575770 Chy07g00130 Chy-Chr7:1110303 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00221 K09843 - csv:101216531 856.284