Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00280 ATGGCTAACGACGACGTTTTCCCCTTCCTCCCTTTTTTACTCTTTCTCATTCTCACTTACTTCATTTGGTTCCATTTCCTCGCCCGTAAACTCACCGGTCCACCCGTCTGGCCGCTCATTGGCAGCCTCCCGGATCTCATCTCCAACCGCCGCCGCCTCCACGACTGGATCGCCGGGAACCTCCGCGCCACAGGCGGCGCTGCCACTTACCAAACTTGCACGGTAGCACTTCCCTTCATTGCTAAAAAACAAGGATTTTACACTGTCACCTGCCATCCTAGAAACATCGAGCACGTGCTTCGAACCCGGTTCGAAAATTACCCGAAAGGACCGGATTGGCAAGCGGCTTTTCACGATTTGTTAGGCCAAGGGATTTTCAATAGCGACGGAGAAATTTGGCTGATTCAACGGAAGACGGCGGCGCTTGAGTTCACCACGAGGACCCTCCGGCAAGCGATGGACCGGTGGGTGAATAGGACGATAAGGACGCGGTTGTGGTGTATATTGGAGAAAGCGGCGGAGTATAAGACGGCGGTGGATTTACAGGATTTGTTGCTCCGATTAACATTTGATAATATTTGTGGACTGACTTTTGGGAAAGACCCACAGACTTTGTCGCCGGAGTTGCCGGCTAACCCGTTTGCTTTGGCGTTTGATACCGCCACTGAAGCCACTCTTCAGCGCCTTCTTTACCCTGGTCTTTTATGGAGAATATTCATGAATGCTAACTTTTTCTTCTTCTTCTTTTTTTGTTTTTTGGTAAGGTTGGAGAAGGTTTTGGGCATTGGAATGGAAAGAAGGTTGAAGAAGAGTTTGAAAGTAGTTGAAGAATACATAAACGACGCCGTTGCAGCCCGTAATAAAGAATCTCCCTCCGACGACTTATTATCCCGCTTCATGAAGAAGCGCGACGACGACCGCTTCTCCTCCGCCGTCCTCCACCGTATTGCCTTAAACTTCGTCCTCGCCGGCCGTGACACCTCCTCCGTGGCTCTCACCTGGTTCTTTTGGCTCGTAATGAACCACCCACACGTGGAGGAAAAAATCCTCTCTGAAATCACAACCGTCCTCCGCCAGACACGTGGCGAAGACACCCGCCGTTGGATCGAAGAGCCGTTGGTATTCGACGAAGCCGATAAATTGGTGTACTTAAAAGCCGCGTTGGCCGAAACGCTGCGTTTATACCCTTCCGTACCGGAGGATTTCAAGTATGTCGTGGCTGATGACGTGTTACCAGATGGCACTTTCGTGCCAGCTGGTTCGACCGTGACGTATTCGATTTATTCCGTTGGGAGGATGAAGAGCATTTGGGGGGAGGATTGTACGGAGTTTAAACCGGACCGGTGGTTGTCTCCAACCGGCGACCGATTCGAGGGGCCTAAAGATGCTTATAAGTTTGTGGCGTTTAACGCTGGACCGAGGACTTGTTTGGGCAAGGATTTAGCTTATTTGCAAATGAAGTCCGTTGCCTCCGCCGTACTCCTCCGGTATCGGTTATCTCTGGTTCCCGGTCACCGGGTGGAACAGAAAATGTCTCTTACTCTTTTTATGAAGAATGGACTTCGGGTTTACTTACATCCTCGTCGGATCGGCTAA 1596 50.75 MANDDVFPFLPFLLFLILTYFIWFHFLARKLTGPPVWPLIGSLPDLISNRRRLHDWIAGNLRATGGAATYQTCTVALPFIAKKQGFYTVTCHPRNIEHVLRTRFENYPKGPDWQAAFHDLLGQGIFNSDGEIWLIQRKTAALEFTTRTLRQAMDRWVNRTIRTRLWCILEKAAEYKTAVDLQDLLLRLTFDNICGLTFGKDPQTLSPELPANPFALAFDTATEATLQRLLYPGLLWRIFMNANFFFFFFFCFLVRLEKVLGIGMERRLKKSLKVVEEYINDAVAARNKESPSDDLLSRFMKKRDDDRFSSAVLHRIALNFVLAGRDTSSVALTWFFWLVMNHPHVEEKILSEITTVLRQTRGEDTRRWIEEPLVFDEADKLVYLKAALAETLRLYPSVPEDFKYVVADDVLPDGTFVPAGSTVTYSIYSVGRMKSIWGEDCTEFKPDRWLSPTGDRFEGPKDAYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLSLVPGHRVEQKMSLTLFMKNGLRVYLHPRRIG* 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3083645 3085864 + Chy12G208800.1 Chy12g00280 238061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00280 531 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00280 531 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00280 531 PRINTS P450 superfamily signature 476 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00280 531 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00280 531 Pfam Cytochrome P450 88 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00280 531 SUPERFAMILY Cytochrome P450 22 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00280 531 PANTHER CYTOCHROME P450 10 529 - -
Chy12g00280 531 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 10 529 - -
Chy12g00280 531 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00280 531 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00280 531 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00280 531 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00280 531 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy12g00280 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Chy12g00280 531 Gene3D Cytochrome P450 27 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01647 Chy-Chr11:22966015 Chy12g00280 Chy-Chr12:3083645 0 dispersed
Chy12g00280 Chy-Chr12:3083645 Chy02g00986 Chy-Chr2:6577649 4.54E-105 dispersed
Chy12g00280 Chy-Chr12:3083645 Chy09g01238 Chy-Chr9:14437368 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00280 K15401 - csv:101214516 999.964