Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00312 ATGAACAACCCATCACAGGAAAGTGTTGAAACTGAAGGCATCTCTCCAAAGAAGGTGAAGAATGGGTCCTACAGAAGTGTGCTTATGTTGGCTTATCAAAGTTTAGGAGTTGTTTATGGGGACCTCAGCACCTCCCCTCTTTATGTCTACAAAACCACCTTCTCTGGGAAATTGAGTCTCCATGAGAATGATGAAGAAATTTATGGGGTTCTATCCTTTATCTTCTGGACATTTACTCTCATTGCTCTCTTCAAATACGTTTTCATTGTCATGTCAGCCAATGATAACGGTGAAGGGGGTACCTTTGCATTGTACTCTCTTCTTTGCCGTCATGCTAGATTATGCATTCTGCCGAATCAAGAGCCTATCGATGATCAATTATCTGCATATGACATTAAGGGGATCTCAGAGACAAGGTCGAGTGCTGCTCTAAAGTCCTTTTTTCGACTGCATCCATCTTTTCGAAGAGGTTTTTTGTTGTTTGTTCTCTTTGGAACCTGCATGGCTATTGGTGATGGAGTGCTCACTCCTGCAATATCAGTTCTTTCAGCAGTCTCGGGAGTCAAACATAAGATCACTGGACTCCATGAGAACTATATTGTTTTAATCTCATGCGTCATCTTGGTTGGACTGTTCTCCCTCCAGCATCGTGGAACACACAAAGTTGCTTTCATGTTTGCTCCAATCATTACGGCGTGGCTTGTCTGTATTAGCGTTATTGGAATGTATAATATCATCAAATGGAACCCAAGTATATATCACGCACTCTCTCCCGTTTATATGCTAAAATTCCTTCGAAGCACAGGTGTTGAAGGTTGGATTTCGTTAGGCGGAGTCGTTCTCTCAATTACAGGTGTGGAGGCAATGTTTGCTGATCTAGGCCATTTCTCTTCACTTTCAATCAAGGTAACCGCAGCCGCTTTGGTTGATAATAAGCAAACTCATTATGATCTTAATATTGCCTTCACATTTTTTGTATATCCCTCCTTGATACTCGCTTATTTGGGTGAGGCTGCATTCCTCTCTAAACACCATGAAGATATTCAGAGAAGCTTCTACAAAGCAATACCTGAAGCTGTGTTTTGGCCGGTGTTTGTCGTGGCCACTTTTGCTTCTGTCATAGGAAGTCAGGCTGTGATTTCGGCTACATTCTCCCTTGTAAACCAGTGTTGTGCTCTGAATTGTTTCCCTCATGTGAAAACTATGCACACCTCAAACCAGATATATGGGCAGATTTATATCCCAGAAGTTAATTGGATGTTAATGTGCCTTTGTTTAGCTGTGACAATTGGCTTGAGAGACACAAGCATGATAGGCCATGCATATGGGCTGGCAGTCACCTTTGTCATGTTTGTCTCAACTTGCTTGATGACACTTGTGATTATAATTGTTTGGAAGCTGAGATTGATCAATGCTGTAGCGTTTTTCATGTTTTTCGGGTCGATCGAACTTCTTTACATCTCTGCATCAATCATCAAAGTTCATGAAGGTGGTTGGATCCCTCTCGTGCTTTCTACAATCTTTATGTGTTCAATGTATGCGTGGTACTATGGAACGATGAAGAAACATGAATACGACGATGAGAACAAAGTGTCAATGAATAGGATTCTTTCTTCGGGGCCTAGTCTCGGCATAGTGCGTGTGCCCGGAATTGGACTCATATACACTAATCTGGTTGCTGGGGTTCCTGCTGTTTTTGGTCACTTTGTAACCACTTTGCCAGCATTTCATCAAGTGCTTGTATTCGTTTGTATAAAATATGTTCAAGTTCCCCATATCAATGAAGAAGATCGTTTGCTTGTCACGAGGGTAGGTCCAAAAGAATGCAACATGTTTCGGTGCATTGTCCGATACGGTTACAGAGATTTACTGCAAGAAAACTACAATTTCGAGAACAGATTAGTGTTTTCTTTAGTGCATTATGTAGAAACAGAAGATCAGTTTTGGAAGAAACCAATGACAGAAGTGTCTAGAGGGTGTGAAAATTCAAAAGAACCTTGTGAATATGAATTACCATTGGAGCAAGCTTTTAGAAGCTCAAACAAATATCAAGCAATGGATACCGCAGTCGATGATCGGGGAAAGTCTATACATAATGAGGAAGCAATGGAGATATTGAGAGCAAAAGAATCAGGAATCACGTACATCTTTGGACATTGCTCGGTCAAGGCAAAGAAATCCTCTTCCATTTTCAAGAAGTTAGCCATTGATATTATATATGCCTTCTTGAACCAGAATTGTAGAGAGCAAGAGGTTTTACTAAATGTGCCTCACACTTCTCTATTGGAAGTCGGAATGGTATATTATGTATAG 2313 40.9 MNNPSQESVETEGISPKKVKNGSYRSVLMLAYQSLGVVYGDLSTSPLYVYKTTFSGKLSLHENDEEIYGVLSFIFWTFTLIALFKYVFIVMSANDNGEGGTFALYSLLCRHARLCILPNQEPIDDQLSAYDIKGISETRSSAALKSFFRLHPSFRRGFLLFVLFGTCMAIGDGVLTPAISVLSAVSGVKHKITGLHENYIVLISCVILVGLFSLQHRGTHKVAFMFAPIITAWLVCISVIGMYNIIKWNPSIYHALSPVYMLKFLRSTGVEGWISLGGVVLSITGVEAMFADLGHFSSLSIKVTAAALVDNKQTHYDLNIAFTFFVYPSLILAYLGEAAFLSKHHEDIQRSFYKAIPEAVFWPVFVVATFASVIGSQAVISATFSLVNQCCALNCFPHVKTMHTSNQIYGQIYIPEVNWMLMCLCLAVTIGLRDTSMIGHAYGLAVTFVMFVSTCLMTLVIIIVWKLRLINAVAFFMFFGSIELLYISASIIKVHEGGWIPLVLSTIFMCSMYAWYYGTMKKHEYDDENKVSMNRILSSGPSLGIVRVPGIGLIYTNLVAGVPAVFGHFVTTLPAFHQVLVFVCIKYVQVPHINEEDRLLVTRVGPKECNMFRCIVRYGYRDLLQENYNFENRLVFSLVHYVETEDQFWKKPMTEVSRGCENSKEPCEYELPLEQAFRSSNKYQAMDTAVDDRGKSIHNEEAMEILRAKESGITYIFGHCSVKAKKSSSIFKKLAIDIIYAFLNQNCREQEVLLNVPHTSLLEVGMVYYV* 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3377780 3382165 + Chy12G209120.1 Chy12g00312 238093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00312 770 PANTHER POTASSIUM TRANSPORTER 13 661 - -
Chy12g00312 770 PANTHER POTASSIUM TRANSPORTER 697 770 - -
Chy12g00312 770 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 661 IPR003855 GO:0015079|GO:0016020|GO:0071805
Chy12g00312 770 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 697 770 IPR003855 GO:0015079|GO:0016020|GO:0071805
Chy12g00312 770 TIGRFAM kup: potassium uptake protein 30 770 IPR003855 GO:0015079|GO:0016020|GO:0071805
Chy12g00312 770 Pfam K+ potassium transporter 32 622 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy10g00917 Chy-Chr10:14824992 Chy12g00312 Chy-Chr12:3377780 0 dispersed
Chy12g00312 Chy-Chr12:3377780 Chy12g01121 Chy-Chr12:16186296 0 dispersed
Chy12g00312 Chy-Chr12:3377780 Chy04g01475 Chy-Chr4:21404996 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00312 K03549 - csv:101222845 1481.46