Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00323 ATGGTTGACAATGGCGAAGAGAAGTTGCTGGCTATGGCTCGCCACATAGCCAAGACCATGGGTCGCAACGAGTCCATGGCCGATGATATTCTCCAGATTTTCTCCAATTTTGATGCTAGGTTTTCCCTCGAGAAGCTTTCTGATAAACCCGATGAGCTTGATCCCAGAGCACCCACCGCGTTACAGCGCTCTCTCAAGTCTTTAGACCGCCGGATCTCCCAATACTTGGCTGTCGACCACCCCATTTGGGCTGATTCCGCTGATTCCTCTGCTTTTCTCGACTCTATTGATGAGTTGATGGGTATCATTAGGGACTGGGCTCCTATGGCTAGGGATAAGTCTGTTGCTTCCTATCTTGCTCGTGCTGACGATCTGATGCAGCAGGCTATGTTCCGTGTCGACCAAGAGTTCCGGTCGTTGATGGACCGTGGAGGCGAGTCTTTTGAATTGACGCGCCATTTCAGGAACGGTGAGTCAACGGGGGATTTCTGCTTTGATTCTGAGGAAGATGAGGAAGGTGCGGAAGGAATTCTGGGCGATGGCGATGGTATCCAGATCCCTGTGGCGCAGCCGGTGACGGATTACAACATCCTTATTGATGCGCTTCCGTCCGGGACTATCAACGATCTCCATGAAATAGCGAAGCGTATGGTAGCGGCTGGGTTTGAGAAAGAGTGTTCACATGCTTATAGTAGCTGCAGGAGGGAGTTCTTGGAGGAGAGTCTTTCTAGGTTGGGGTTACAGAAGCTGAGCATCGATGAAGTTCAAAAGATGCAATGGCAAGACCTCGAAGAGGAAATTGAGCGGTGGATGAAAGCGATTACCCTCTCTCTTCGAATTCTCTTCCCAAGCGAACGACGCCTGTGTGAACGTGTCTTCGTCGGCCTCTCTACCACCGCGGATCTTTCTTTCATGGAAGTCTGCCGTGGATCCACTATTCAGCTATTGAATTTTGCAGATGCGGTGGCAATTGGCTCCCGCGCGCCGGAACGATTGTTCAAAATCCTCGATATGTTCGAGACCTTGAGAGACTTGATGCCGGAGTTCGATTCGGTATTTTCAGATCAGTACTGCTTGTTGCTTAGAAATGAAGCAATTACAATCTGGAAAAGGTTAGGCGGAACAATCAAAGGGATTTTCATGGAGCTGGAGAATTTGATCCGCCGTGATCCGGCTAAAACTCCAGTCCCTGGGGGTGGTCTTCATCCAATCACTCGATATGTGATGAATTACCTTAAAGCAGCTTGCAAATCCCGGCAGACTTTGGAGCAAGTTTTTGACGAACCTGCCCTTCCTTCTAAGGATTACACCAAGTTCGACGACAGAGCAGCATCATCGTCCTCCTTATCTGTTCAAATGGACTGGATTATGGAGCTTTTAGAGAGCAATTTAGAAGCAAAGTCGAAAATATACAAGGATCTTTCCTTAAGCTCTGTGTTTCTGATGAACAATGGGAGATACATTGTTCAGAAAGTGAAAGACAGTGAACTAGGATCCGTTTTAGGAGACGATTGGATTCGAAAACACTCGGTTAAGAACCGACAATACCTCGGAAACTACCTGAAAAGCTCATGGAGCAAGGTGGTGGGCGCATTGAAAATGGACAGTGGCACTTTAGCTCCTTCTGCGATGAAGGAGAAGCTTCAATCATTCAATATGCAGTTTGAAGAAATCTGCCAAAATCAATCCACATGGGTGATATTTGAGAATCAGCTGAGAGAGGAAACAAGAATCTCAGTTGCCAAAATCCTTTTGCCAGCATATCAAAAGTTCATAGGAAGGTACCAGAGTTTGCCGGAGTTGGCAAAGCGTACAGATCGGTATTTGAAGTACACTGCAGAGGAAATGGAGGGTCGAATCACGGAGCTGTTCGAAGGCGGCAGCTCAGGCAGTGGAAGGAGATCTCAATTTCAAAAACGGTGTCGTTGTGGTGAAATGGGTAATAGTTTAAAGCATTGTTTAGGTTGTATTCTTCCCTGTGGAGCTTTGGATTTAATCAGAGTCGTTCATCTCAACGGCCTTGTCCAAGAGTTCTCTCCCCCCCTCACCGCCGCCCAGATTCTCCAAGCCAATCCCGGCCACCTCCTCACCACTCCCTCCTCCCACGACCACCGTCTCGTCCGTCGCGTCAACATTCTCTCACCCCAATCTCACCTCCGACGAGGCGGCATTTATTTCTTGATCCCCGATGATCATTCCGACCACGGCCACCGCCAGCCACCTGCTAAAAAACAATCCTCCGCCGTCTCCGGTGGCGGCGTTTTCCCTGAATCTGAGGATGTGATTGTGTTGAAGAAGGATAAACCCAGGCGCCGAGATCGCCGGAGGAGTCGTAGCTACGGCGGGGCGTGGCAGCCTCATTTACACAGCATTAGTGAAGATTAG 2385 49.01 MVDNGEEKLLAMARHIAKTMGRNESMADDILQIFSNFDARFSLEKLSDKPDELDPRAPTALQRSLKSLDRRISQYLAVDHPIWADSADSSAFLDSIDELMGIIRDWAPMARDKSVASYLARADDLMQQAMFRVDQEFRSLMDRGGESFELTRHFRNGESTGDFCFDSEEDEEGAEGILGDGDGIQIPVAQPVTDYNILIDALPSGTINDLHEIAKRMVAAGFEKECSHAYSSCRREFLEESLSRLGLQKLSIDEVQKMQWQDLEEEIERWMKAITLSLRILFPSERRLCERVFVGLSTTADLSFMEVCRGSTIQLLNFADAVAIGSRAPERLFKILDMFETLRDLMPEFDSVFSDQYCLLLRNEAITIWKRLGGTIKGIFMELENLIRRDPAKTPVPGGGLHPITRYVMNYLKAACKSRQTLEQVFDEPALPSKDYTKFDDRAASSSSLSVQMDWIMELLESNLEAKSKIYKDLSLSSVFLMNNGRYIVQKVKDSELGSVLGDDWIRKHSVKNRQYLGNYLKSSWSKVVGALKMDSGTLAPSAMKEKLQSFNMQFEEICQNQSTWVIFENQLREETRISVAKILLPAYQKFIGRYQSLPELAKRTDRYLKYTAEEMEGRITELFEGGSSGSGRRSQFQKRCRCGEMGNSLKHCLGCILPCGALDLIRVVHLNGLVQEFSPPLTAAQILQANPGHLLTTPSSHDHRLVRRVNILSPQSHLRRGGIYFLIPDDHSDHGHRQPPAKKQSSAVSGGGVFPESEDVIVLKKDKPRRRDRRRSRSYGGAWQPHLHSISED* 795
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3489766 3499262 - Chy12G209230.1 Chy12g00323 238104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00323 794 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 29 625 - -
Chy12g00323 794 Pfam Exo70 exocyst complex subunit 268 621 IPR046364 GO:0000145|GO:0005546|GO:0006887
Chy12g00323 794 PANTHER EXOCYST COMPLEX PROTEIN EXO70 29 625 IPR004140 GO:0000145|GO:0006887
Chy12g00323 794 Pfam PADRE domain 646 793 IPR025322 -
Chy12g00323 794 Gene3D Exocyst complex component Exo70 82 634 - -
Chy12g00323 794 MobiDBLite consensus disorder prediction 730 794 - -
Chy12g00323 794 SUPERFAMILY Cullin repeat-like 83 625 IPR016159 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01488 Chy-Chr7:19186467 Chy12g00323 Chy-Chr12:3489766 2.41E-121 dispersed
Chy11g01400 Chy-Chr11:20408296 Chy12g00323 Chy-Chr12:3489766 1.59E-32 dispersed
Chy12g00088 Chy-Chr12:875392 Chy12g00323 Chy-Chr12:3489766 5.14E-22 dispersed
Chy12g00323 Chy-Chr12:3489766 Chy12g01170 Chy-Chr12:16583153 3.64E-127 dispersed
Chy12g00323 Chy-Chr12:3489766 Chy12g00132 Chy-Chr12:1479268 1.27E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00323 K07195 - csv:101204511 1223.38