Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00332 ATGTCCACCACCCAGAATCCTGAACTTGTTTGTGTCACCGGCGCCAGTGGCTGTATCGGATCCTGGCTCGTTCACCTCCTTCTCCTCCGCGGCTACTCCGTCCATGCCACAGTTCAAAATATCAAGGACGAGGCTGAAACCAAGCATCTGCAGGATTTAGAAGGAGCGGATGCTCGTCTTCGTCTCTTCCAAATCGACCTTCTCGATTATGATTCCATTGTCCCCGCCGTCACTGGTTGTGCTGGTGTCTTCCACGTTGCGTCTCCTTGCATTGTTGATGCTGTTGAGGATCCTCAGAGGGATTTATTGGATCCGGCTATCAAAGGAACCATCAATGTCCTGACGGCGGCTAAGGAGGCTGGTGTACGACGTGTAGTGGTGACTTCTTCTATCTCCGCCATGATTCCGAACCCTAACTGGCCGGCGAATGTTGTAAGGAATGAAGAAAGCTGGACCGATGTTGATTACTGCAAGCAAAAAGAGCTGTGGTATTCAATTTCAAAAACTCTAGCAGAAAAGGCTGCTTGGGATTTTGCCAAGGAGAAAGGATTGGATGTGGTGGTGATTAATCCAGGCACAGTCATGGGCCCTGTGTTTCCTCCCAGAATCAATGCAAGCATGCAAATGCTTTTAAAACTTCTCGAGGGGACCAGTGAGACATACGGGGATGTGTTTATCGGAGTAGTGCACTTTAAAGATGTTGCATTAGCACACATTTTGGTGTATGAAAACAAATCAGCTACAGGAAGACACCTTTGTGCCGAGTCCATAGCTCGTTACTCTGACTATGTTGCGAAGGCTGCTGAACTCTTTCCTCACTACAAGGTGCCCAGATCGATAGAAGATTCACAGCCTGATTTGGTGAGAGCAAAAGATGGAGCTAAGAAGTTGATGAACCTGGGCGCCAATTTCTTTGTCAACTATCTGGTTAAGCTTTTTGATGACGATCTCATCTCCATAGTTGATCTCAGACTCGTTCCTTATGGCAACGCAAGGGTTGGCCGCAATGATTCCATCACTTGTCAGCATGGCCCTAGTGAATGCCTGTTGAACACTATGGAAGCCTGTGCCATTAACGCCTGGCCTGAGCTGGATGGACATTTTCCTTTCATCTACTGTGTTGAGTATCTGGTGTACAAACGGAAGTACACCCAGTGGGAGTCATGTTTTGAGAAGTTGGGGTTGAATCCCAAGCCCATCAGTGATTGCTACAGTACCGAGCTCGGGAAAAAGCTTGAACTGGAATATGCAGCTGAGACCGATAATCTTCAGCCTCCTCACAAATACGTGCCTTGGGTTGTTGTAGATGGGCAACCACTATATGAGGATTATGAAAACTTCATAAATTACATATGTGAGGCGTATAAGGGACCAGCTGTGCCCACTGCTTGTAAAGCTTCATCCATTAGTTTTTTGGTTCGCAAATCGAATAACTTGTTTATCATGGATTGTTGCCCTAGAATCATACCCTCATTCCTTTGCCTCTTTCATCTCCTACTCTTGCTATGCTCCCTGGTTTCAGCTTCACCACCAATCCCTAATTATGGGTGTGAAAAAGTGTCTCTGGATGTTTACTATGAATCTCTCTGTCCAGACAGTGTGAAATTTATAGTGGACAATTTGATTGAGTTGTTTGAAGGTGACCTCCTCTCCATAGTTGATCTCAGATTCGTTCCTTACGGCAATGCAAGGCTCGATCGAAACAGTTCCATCACTTGTCAGCATGGGCCGAATGAATGTCTCCTGAACACTGTGGAAGCCTGCGCCATTCATGCCTTGCCTGATCTGACAGGGGCCACAGGGCATTTTCCTTTTATTTACTGTGTTCAGACTGTGGTGTACGAGCGGAAGTATACCCAATGGAAGACTTGCTTCGAGAAATTGGGATTGAATTCTAAGCCTATTTATGATTGCTATTCTTCTGGGCTTGGGAAAGAGCTTGAACTACAATATGCAGCTGAAACCAACAATCTTCAGCCTCCTCATAAATACGTTCCTTGGGTTGTTGTTGATGGACAACCACTTTATGAGGACTATGAAAACTTCGTCAGTTACATCTGTGCAGCGTATAAAGGTTTTTCCGTGCCAACAGCTTGTAGAGCTAAATCCCTTAGTGACATTTAA 2124 45.86 MSTTQNPELVCVTGASGCIGSWLVHLLLLRGYSVHATVQNIKDEAETKHLQDLEGADARLRLFQIDLLDYDSIVPAVTGCAGVFHVASPCIVDAVEDPQRDLLDPAIKGTINVLTAAKEAGVRRVVVTSSISAMIPNPNWPANVVRNEESWTDVDYCKQKELWYSISKTLAEKAAWDFAKEKGLDVVVINPGTVMGPVFPPRINASMQMLLKLLEGTSETYGDVFIGVVHFKDVALAHILVYENKSATGRHLCAESIARYSDYVAKAAELFPHYKVPRSIEDSQPDLVRAKDGAKKLMNLGANFFVNYLVKLFDDDLISIVDLRLVPYGNARVGRNDSITCQHGPSECLLNTMEACAINAWPELDGHFPFIYCVEYLVYKRKYTQWESCFEKLGLNPKPISDCYSTELGKKLELEYAAETDNLQPPHKYVPWVVVDGQPLYEDYENFINYICEAYKGPAVPTACKASSISFLVRKSNNLFIMDCCPRIIPSFLCLFHLLLLLCSLVSASPPIPNYGCEKVSLDVYYESLCPDSVKFIVDNLIELFEGDLLSIVDLRFVPYGNARLDRNSSITCQHGPNECLLNTVEACAIHALPDLTGATGHFPFIYCVQTVVYERKYTQWKTCFEKLGLNSKPIYDCYSSGLGKELELQYAAETNNLQPPHKYVPWVVVDGQPLYEDYENFVSYICAAYKGFSVPTACRAKSLSDI* 708
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 3552674 3562430 - Chy12G209320.1 Chy12g00332 238113
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00332 707 PANTHER BNAC05G04890D PROTEIN 295 477 - -
Chy12g00332 707 PANTHER BNAC05G04890D PROTEIN 492 703 - -
Chy12g00332 707 Pfam NAD dependent epimerase/dehydratase family 10 249 IPR001509 -
Chy12g00332 707 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 282 IPR036291 -
Chy12g00332 707 CDD FR_SDR_e 10 301 - -
Chy12g00332 707 Pfam Gamma interferon inducible lysosomal thiol reductase (GILT) 522 627 IPR004911 GO:0016671
Chy12g00332 707 Pfam Gamma interferon inducible lysosomal thiol reductase (GILT) 302 392 IPR004911 GO:0016671
Chy12g00332 707 PANTHER GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT 492 703 IPR004911 GO:0016671
Chy12g00332 707 PANTHER GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT 295 477 IPR004911 GO:0016671
Chy12g00332 707 Gene3D - 2 329 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01606 Chy-Chr6:18526372 Chy12g00332 Chy-Chr12:3552674 5.16E-36 dispersed
Chy06g01607 Chy-Chr6:18532215 Chy12g00332 Chy-Chr12:3552674 9.58E-41 dispersed
Chy07g00428 Chy-Chr7:3303141 Chy12g00332 Chy-Chr12:3552674 1.06E-51 dispersed
Chy08g00615 Chy-Chr8:13966349 Chy12g00332 Chy-Chr12:3552674 4.04E-58 dispersed
Chy11g00460 Chy-Chr11:4806322 Chy12g00332 Chy-Chr12:3552674 2.40E-41 dispersed
Chy11g01981 Chy-Chr11:25746249 Chy12g00332 Chy-Chr12:3552674 1.96E-50 dispersed
Chy12g00332 Chy-Chr12:3552674 Chy01g01946 Chy-Chr1:24682619 2.89E-80 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00332 - - csv:101204420 598.586