Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00341 ATGAATCCCTCTACGCTTCTCGCTTCTCATTTCTCAAACAACCGCTTTTCCACCTCCTCTTATCTCCTCAATCCTCTCCCTCTTCCAACTCCCACTAACTTCAATCTCTCCAGACGTCGCCACTTCAGAGTCTCAATTCCCCGTGCCTCCTCCGAGGTTGCACAACAAGACGTCTCCTCCTCCTCCTCCCCTTCCTCGCTTGATATCTTTGGCGGCAAGAAGGAGCTTACTGGGCTTCAGCCTATTGTTCACCTTCTACCTCCGCCTTTACGCTTAGCAACCTCTGCCATTGTTGTTGCCGGAGCTGTAGCCGCCGGTTATGGACTCGGCTTGCGCTTTGGTAAGTCCAGCAACGCAGCTTTGGGTGGGGCTGCTGCTCTCGCTGCGGCTAGTGGAGCCGCTGTATACTCCTTTAATTCTTGTGTTCCTGAAGTTGCGGCCGTCGATTTGCATAATTATGTGGCCGGTTTTGATGATCCCAAGAACGTGAAGAAGGAGGAAATTGAAAGCATTGCCACAAAATATGGAGTTAGCAAGCAAGATGAGGCGTTTAACGCGGAGCTTTGTGACTTGTATTGTCGATTTGTGTCTTCTGTTCTTCCCTCGGGAAGTCAAGATCTTAGTGGGGACGAGGTTGACACAATCATCAAGTTCAAAAGTGCCTTGGGCATTGATGACCCTGATGCAGCTGCTATGCATATGGAGATTGGTCGAAGAATTTTTAGGCAACGGCTTGAAACTGGAGACCGTGATGGTGACCTAGAGGAACGTCGGGCATTTCAGAAACTTATATACGTATCAACCCTTGTGTTTGGGGATGCATCGTCTTTCCTGTTACCTTGGAAACGTGTTTTTAAGGTTACTGATTCTCAGGTCGAGATTGCCATCCGCGACAACGCTCAACGCCTGTATATTTCTGAGCTAAAATCAGTTGGAAGAGATCTTAATGCCGAAAAGCTCATAAGCCTCAAGGATGCACAACGTTTGTATCGACTTTCTGATGAGCTGGCAGATGATTTATTTAAGGAGCATACAAGGAAGCTTGTTGAGGAAAATATATCAGTAGCACTCAATATACTCAAGTCCAGAACAAGGGCAGTCCGGGGAGTCATCGAAGTTGTGGAAGAGCTTGATAAGATACTTGAGTTCAACAGTTTGCTTATTTCATTAAAGAACCATCCAGATGCCAATCGCTTTGCTCCTGGTGTTGGCCCAGTTTCTCTCCTGGGTGGAGAGTATGATGGTGACAGGAAGATAGATGATTTGAAGCTCCTCTATCGAACCTATGTTACAGATTCTTTATCTAATGGCCGCATGGAAGAAGATAAGCTTGCTGCCTTGAATCAATTGAGAAATATATTTGGTTTAGGGACGCGAGAAGCAGAAAACATTACACTTGATGTTACCTCAAAGGTTTATCGCAAACGTCTTTCACAGTCTGTTAGTAGTGGTGATTTGGAGATAGCAGATAGTAAAGCAGCCTTCCTCCAAAATCTCTGTGAGGAGCTTCACTTTGATCCATTGAAGGCCAGTGAGATTCATGAAGAAATTTACCGACAAAAGCTTCAGCAATGTGTTGCTGATGGAGAGCTGAGTGATGAGGATGTATCGGCACTGCTGAGGTTAAGAGTTATGCTTTGCATACCTCAACAGACTGTCGAAGCGGCACATACAGATATTTGTGGTTCCTTGTTTGAAAAGGTTGTAAGGGAGGCCATTGCTGCAGGTGTTGATGGTTATGATGCAGATATAAAGAAATCTGTGAAGAAGGCAGCTCATGGCTTGCGCTTGACTAGGGAGGCTGCCATTTCAATTGCCAGCAAAGCAGTTCGTAAGATTTTCATCAACTATATAAAGCGAGCTCGTGGAGTTGGAAATCGTACTGAAGCTGCAAAAGAACTTAAGAAGATGATTGCTTTTAATACGCTAGTTGTTACAGAATTGGTGGCTGATATAAAAGGGGAATCTTCTGATGCTGATGCCTCATCGGAAGAGCCTATCAAAGAAGTTGAGGAACAACTTGAGGAGGACGAGGAATGGGAATCACTTCAGACTTTGAGGAAAATAAAACCAAACAAAGAGCTTTCTGCAAAATTGGGGAAACCTGGTCAGACAGAGATCACTTTGAAGGATGACCTGCCAGAAAGAGAACGAACCGACCTTTACAAGACATATTTGCTTTTTTGTATAACTGGTGAAGTTACCCGTATTCCTTTTGGTGCTCAGATTACGACAAAGAAGGATGATTCTGAGTATGTCTTACTAAATCAGCTTGGCAACATTTTGGGTTTAACCACTAAGGAGACTGTTGAAGTACATAGGAGCCTTGCTGAGCAGGCCTTCCAGCAACAAGCTGAGGTAATTTTGGCCGATGGTCAACTTACAAAGGCCAGGGTAGAACAGCTCAACGAGTTACAGAAGAAAGTTGGGTTGCCTGCTGAATATGCCAATAAGATCATTAAGAACATAACAACCACAAAAATGGCTGCTGCCATCGAAACTGCTGTTGGTCAAGGACGGCTCAACATTAAGCAGATTAGAGAACTTAAGGAAGCAAATGTTGATTTAGATAGCATGATATCTGAGAGATTGCGAGAGAATCTCTTCAAAAAGACCGTGGATGACATTTTCTCATCCGGCACTGGCGAGTTCGATGAAGAAGAAGTCTATGAGAAAATCCCGTTGGACCTCAACATTAATGCTGAGAAGGCAAAACGGGTTGTACACGAGCTGGCAGAGAGCAGGTTGTCAAACTCCTTAGTTCAGGCCGTGGCATTGTTCAGGCAGAGAAATCGTCAGGGGGTGGTATCATCTCTCAATGATCTTCTTGCATGTGACAAAGCTGTTCCATCGAAGCCTTTATCATGGGATGTGTCGGAAGAACTTGCGGATTTGTACTCTGTATATGCAAAGAGCGAGCCGACCCCTGAGAAGTTGTCTCGTTTGCAATATTTGCTGGGCATAGATGACTCTACTGCAGCTGCTATTCGAGAGATGGGGGATAGATTACAACCTCTTGGTGCGGAGGAGGAAAACTTTGGATGTGATGCGTCGGTGCTGTTGGATGACACATCAAACTTTACCGGAGAAAAAACGGCGATTCCAAACAAAGATTCACTAAGAGGTTTTGAAGTGATCGACTCAATAAAAACGTTGGTGGAGGCTGCTTGTCCTTCTGCGGTTTCTTGTGCTGATATTTTGTCCCTTGCAGCTCGAGATTCTGTGATTGCACTTGGAGGGCCTTCGTGGGTAGTTGGACTTGGGCGGAGGGACTCAACCACAGCCAGCTTCGACAACGCAAACAATGACCTTCCTTCTCCCTTCCTCGACCTTCCTGATCTCATCTCTGCCTTTTCTAACAAAGGCTTCGACACCAAAGAATTGGTCGCCCTTTCAGGATCTCACACAATTGGACAAGCAAGGTGCTCCATGTTCAGAGTAAGGGCCCATAACGAAACAACCACCATTGATCCAGATTTTGCAGCCTCTCTAAGAACCAACTGCCCTTTCTCCGGCGACGATCAAAATCTTTCCCCTTTGGATCTCAATACTCAATCCTTGTTCGACAACGCTTATTTCAAAAATTTGGTTCAAAACAAAGGCCTTCTTCACTCCGATCAAGCTCTCTTCACCAACTCCTCCTCCTCCTCCTCTGCAGATTCTCACGTCAATTCCTACATCTCCGACCCTAAAGCTTTCTTCTCCGACTTCGCCGCTGCCATGGTTAAGATGTCCAACCTCTCCCCTCTCACCGGCTCCGACGGCCAGATTCGCTCCGACTGCCGTAAAATCAATTGA 3798 45.66 MNPSTLLASHFSNNRFSTSSYLLNPLPLPTPTNFNLSRRRHFRVSIPRASSEVAQQDVSSSSSPSSLDIFGGKKELTGLQPIVHLLPPPLRLATSAIVVAGAVAAGYGLGLRFGKSSNAALGGAAALAAASGAAVYSFNSCVPEVAAVDLHNYVAGFDDPKNVKKEEIESIATKYGVSKQDEAFNAELCDLYCRFVSSVLPSGSQDLSGDEVDTIIKFKSALGIDDPDAAAMHMEIGRRIFRQRLETGDRDGDLEERRAFQKLIYVSTLVFGDASSFLLPWKRVFKVTDSQVEIAIRDNAQRLYISELKSVGRDLNAEKLISLKDAQRLYRLSDELADDLFKEHTRKLVEENISVALNILKSRTRAVRGVIEVVEELDKILEFNSLLISLKNHPDANRFAPGVGPVSLLGGEYDGDRKIDDLKLLYRTYVTDSLSNGRMEEDKLAALNQLRNIFGLGTREAENITLDVTSKVYRKRLSQSVSSGDLEIADSKAAFLQNLCEELHFDPLKASEIHEEIYRQKLQQCVADGELSDEDVSALLRLRVMLCIPQQTVEAAHTDICGSLFEKVVREAIAAGVDGYDADIKKSVKKAAHGLRLTREAAISIASKAVRKIFINYIKRARGVGNRTEAAKELKKMIAFNTLVVTELVADIKGESSDADASSEEPIKEVEEQLEEDEEWESLQTLRKIKPNKELSAKLGKPGQTEITLKDDLPERERTDLYKTYLLFCITGEVTRIPFGAQITTKKDDSEYVLLNQLGNILGLTTKETVEVHRSLAEQAFQQQAEVILADGQLTKARVEQLNELQKKVGLPAEYANKIIKNITTTKMAAAIETAVGQGRLNIKQIRELKEANVDLDSMISERLRENLFKKTVDDIFSSGTGEFDEEEVYEKIPLDLNINAEKAKRVVHELAESRLSNSLVQAVALFRQRNRQGVVSSLNDLLACDKAVPSKPLSWDVSEELADLYSVYAKSEPTPEKLSRLQYLLGIDDSTAAAIREMGDRLQPLGAEEENFGCDASVLLDDTSNFTGEKTAIPNKDSLRGFEVIDSIKTLVEAACPSAVSCADILSLAARDSVIALGGPSWVVGLGRRDSTTASFDNANNDLPSPFLDLPDLISAFSNKGFDTKELVALSGSHTIGQARCSMFRVRAHNETTTIDPDFAASLRTNCPFSGDDQNLSPLDLNTQSLFDNAYFKNLVQNKGLLHSDQALFTNSSSSSSADSHVNSYISDPKAFFSDFAAAMVKMSNLSPLTGSDGQIRSDCRKIN* 1266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3595527 3605924 - Chy12G209410.1 Chy12g00341 238122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00341 1265 CDD secretory_peroxidase 1014 1264 IPR033905 GO:0004601|GO:0042744
Chy12g00341 1265 PRINTS Haem peroxidase superfamily signature 1181 1196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g00341 1265 PRINTS Haem peroxidase superfamily signature 1079 1091 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g00341 1265 PRINTS Haem peroxidase superfamily signature 1061 1078 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g00341 1265 PRINTS Haem peroxidase superfamily signature 1127 1142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g00341 1265 PRINTS Plant peroxidase signature 1060 1070 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g00341 1265 PRINTS Plant peroxidase signature 1126 1138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g00341 1265 PRINTS Plant peroxidase signature 1195 1212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g00341 1265 PRINTS Plant peroxidase signature 1079 1094 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g00341 1265 PRINTS Plant peroxidase signature 1179 1194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g00341 1265 PRINTS Plant peroxidase signature 1239 1252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g00341 1265 PRINTS Plant peroxidase signature 1041 1054 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g00341 1265 ProSiteProfiles Plant heme peroxidase family profile. 1014 1265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g00341 1265 Gene3D - 1014 1265 - -
Chy12g00341 1265 PANTHER PROTEIN TIC110, CHLOROPLASTIC 1 1013 IPR031610 -
Chy12g00341 1265 Pfam Chloroplast envelope transporter 76 649 IPR031610 -
Chy12g00341 1265 Pfam Chloroplast envelope transporter 751 940 IPR031610 -
Chy12g00341 1265 ProSitePatterns Peroxidases proximal heme-ligand signature. 1127 1137 IPR019793 -
Chy12g00341 1265 Pfam Peroxidase 1014 1221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g00341 1265 Gene3D Peroxidase, domain 2 1105 1245 - -
Chy12g00341 1265 SUPERFAMILY Heme-dependent peroxidases 1014 1265 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy11g01392 Chy12g00341 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy12g00341 Chy-Chr12:3595527 Chy10g00053 Chy-Chr10:1309998 1.27E-87 dispersed
Chy12g00341 Chy-Chr12:3595527 Chy03g00215 Chy-Chr3:2013946 2.52E-95 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00341 - - csv:101203016 1835.85