Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00368 ATGTTACAACACCTTCCCCCAGAATCAGACGCTCTTAATTCCAATTCCAGCCAAAATTCTATGAGCAGCGAGAGTTGTAGTAGCTTCAGTCGTCTTTCATTTGATGCCGCCATTGATTTACCCACTTCCCGATCTTCACCCGCCAGTCTCCATTTAAAGCCACATCGTTCATCTGATTTCGCTTACTCCGCTATTCGTCGTCGCAAATCTAAACTCACGTTTCGTGATTTTCGACTTCTCCGTCGGATTGGTGCTGGCGACATTGGTACTGTTTATTTGTGTCAGTTGAGGAACTTGAGTAAAGGGTGTTGTTACGAAGACGAAGATGATGAAGATGACGACGTCGACGAGGAGGATGATGATGATGATGATGTTTCGTGTTTGTATGCGATGAAAGTTGTGGATAAAGACGCGTTGGAATTGAAGAAGAAAGTTCAGAGAGCGGAAATGGAAAGGAAAATATTGAAGATGCTTGATCATCCGTTTTTGCCTACACTTTACGCTGAGTTTGAAGCTTCTCATTTCTCTTGTATTGTTATGGAGTTTTGTTCTGGTGGGGATTTGCATTCTCTCCGCCATAAACAACCACGGAAACGCTTCTCTCTCACCTCCGCTAGGTTTTATGCAGCGGAAGTTCTTGTTGCTTTAGAGTACCTTCATATGCTTGGAATCATTTACAGAGACCTTAAACCGGAGAATGTTCTCGTCCGATCAGACGGTCACATTATGTTGTCGGATTTTGATTTATCTCTCTGTTCCGACGCCACCCCTGCCGTTGAATCACCCAACTCTTCCCCGAACACGGAATTTCCCGAATCAACGGCGTACCCCAAAACCAACGCTCCCGTTCCCGCCGCCTCCGCAGCTCCTTTTTCCTGCCTGTACAACCGGCTTTTCCGGTCGAGGAAGGTCCAAACTCTGTCTCCCAACTGGCTCTTCGTCGCTGAGCCCGTTTCCGCTAGGTCCTGCTCCTTCGTTGGTACTCACGAGTACGTCTCGCCGGAAGTTGCCGCCGGCGGGTCTCACGGTAACGCCGTGGACTGGTGGGCCTTTGGAATTTTTCTCTACGAGTTGATCTACGGCCGGACGCCGTTTGCGGCTTCGTCGAACGAGACGACGTTGAGAAGCATTATAAAGAAACCGTTGACGTTTCCCACAGCCGTGCCGTCTGGCGCGCTTGAACACCACGCGCGGGACCTCATATCCGGTTTACTGAATAAGGACCCGACCCGGAGACTGGGGTCGAAACGCGGGTCCGCCGACATCAAGAAGCATCCATTCTTCAAAGGCCTCAACTTTGCGTTAATTCGATCCCTCACTCCTCCGGAAATCCCCGGGGTGCGACGGCGTAGGGCGCCGCCAGCTCCGGTGGCGAAAAATAAGGATCACAAGTCCGGTCAGTCGACCGGGTTCGATTATTTCTGA 1425 50.32 MLQHLPPESDALNSNSSQNSMSSESCSSFSRLSFDAAIDLPTSRSSPASLHLKPHRSSDFAYSAIRRRKSKLTFRDFRLLRRIGAGDIGTVYLCQLRNLSKGCCYEDEDDEDDDVDEEDDDDDDVSCLYAMKVVDKDALELKKKVQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKQPRKRFSLTSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDATPAVESPNSSPNTEFPESTAYPKTNAPVPAASAAPFSCLYNRLFRSRKVQTLSPNWLFVAEPVSARSCSFVGTHEYVSPEVAAGGSHGNAVDWWAFGIFLYELIYGRTPFAASSNETTLRSIIKKPLTFPTAVPSGALEHHARDLISGLLNKDPTRRLGSKRGSADIKKHPFFKGLNFALIRSLTPPEIPGVRRRRAPPAPVAKNKDHKSGQSTGFDYF* 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4176145 4178113 - Chy12G209680.1 Chy12g00368 238149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00368 474 Gene3D Phosphorylase Kinase; domain 1 75 182 - -
Chy12g00368 474 MobiDBLite consensus disorder prediction 444 474 - -
Chy12g00368 474 Coils Coil 131 158 - -
Chy12g00368 474 PANTHER FLIPPASE KINASE 1-RELATED 14 472 - -
Chy12g00368 474 MobiDBLite consensus disorder prediction 8 24 - -
Chy12g00368 474 ProSiteProfiles Protein kinase domain profile. 77 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g00368 474 Pfam Protein kinase domain 126 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g00368 474 Pfam Protein kinase domain 322 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g00368 474 Gene3D Transferase(Phosphotransferase) domain 1 183 250 - -
Chy12g00368 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Chy12g00368 474 SMART serkin_6 77 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g00368 474 Gene3D Transferase(Phosphotransferase) domain 1 322 446 - -
Chy12g00368 474 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 14 472 - -
Chy12g00368 474 MobiDBLite consensus disorder prediction 1 24 - -
Chy12g00368 474 SUPERFAMILY Protein kinase-like (PK-like) 56 444 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy12g00368 Chy-Chr12:4176145 Chy12g00620 Chy-Chr12:8912134 1.75E-131 dispersed
Chy12g00368 Chy-Chr12:4176145 Chy11g00891 Chy-Chr11:12313870 1.40E-127 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71607 PF00069 Pkinase 1.10E-29 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00368 - - csv:101208129 861.677