Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00380 ATGGATAATGGTGATATTGAGAGTGGGGAAGAGGAATTTCATGGTCAGAGGGGTAGGAAGTATCGTCCTGTTGAAGCCCATGATCGTGCTGTTCTTGAAATGTCTTCTATGGATCCGGGTTCCTCTTCTTCTTCTTCCTCTGTTCCACCCATACGCCATCCTTCTCTCAAGAAGGTAAAAGTGGGCTCTCAGACAGGTACTGAAAAAGAAGGGAACTCTCCTACTCGTATTGATGTCAATGGCCCCCAGCGAGAATCGAAACTGGAGTTTTTTGGTTTTGATTCTCTTGTTAATATTCTTGGCCTTAAGAGTATGATGGGGGAACAAATTCAAGCGCCTTCTAGTCCTCGGGATGGTGAGAATGTTTCTATGACTCAAGGGTTGCCAAAGACCAATGAAGTCAAATCAGGTACATTGATGGGTGTATTTATCCCATGCTTACAGAACATATTGGGAATCATTTACTATATTCGATTTTCTTGGATCGTTGGGATGGCTGGCATTGGTGAGTCATTAGTACTGGTGGCGTTTTGTGGTTTATGTACGTTCTTGACTTCGATTTCACTAAGTGCTATTGCAACTAATGGTGCTATGAAGGGTGGGGGACCATATTATCTGATAGGTCGTGCCCTTGGTCCAGAGGTTGGAGTTAGCATTGGGCTATGTTTCTTCCTCGGAAATGCAGTTGCTGGTGCTCTTTATGTGTTGGGAGCTGTTGAAACATTTTTGAATGCTGTACCAGCTGCAGGGATATTCAGAGAGACTGTAACAAAAGTTAATGGAACAACTGTCGAGCCAATACAAAGTCCAAGTTCACATGACTTGCAAGTTTATGGCATTATTGTGACTATTCTTCTGTGCTTCATTGTGTTTGGTGGTGTGAAAATGATTAATAGGGTTGCTCCTGCTTTCCTGATTCCAGTCTTGTTCTCAGTACTTTGCATATTTCTTGGAGTTTTTCTGGCAGGAAAAAACGACCCTACAGAGGGTGTCACAGGCTTGAGTTTGGAATCTTTTAAAGAAAATTGGAGTTCTGATTATCAGATGACCAACAGTGCTGGAATTCCTGATCCTCTAGGAAAAGTATATTGGAATTTCAATGCATTGGTTGGGCTGTTTTTCCCTGCTGTGACGGGAATAATGGCTGGCTCTAATAGATCAGCTTCACTGAAGGATACTCAGCGTTCAATTCCCATTGGAACATTGGCTGCAACTTTAACAACAACTGTATTGTATCTGGTCTCTGTTTTGCTGTTTGGAGCACTGGCAACCAGAAAGAAATTGTTGACGGATAGGCTTCTTACCGCCACGGTTGCTTGGCCTTTCCCAGCAATTATTTATGTTGGAATTATTTTATCAACTCTTGGAGCTGCCCTTCAGAGCCTGACAGGAGCCCCTCGCTTGCTAGCAGCCATAGCCAATGATGATATATTGCCTATCCTAAACTATTTTAAAGTAGCAGATGGCAGCGAGCCATACTTTGCAACCCTCTTTACTGCATTTCTCTGCATCGGATGTGTCATAATTGGGAATCTTGATCTTATCACACCAACTGTAACCATGTTTTTCTTACTGTGTTATGCTGGTGTTAACTTATCCTGCTTCCTTTTGGATTTACTAGACGCTCCCAGTTGGCGTCCACGTTGGAGATTCCATCACTGGAGCCTCTCTCTTCTTGGAGCATCACTTTGTGTAGTGATCATGTTCTTGATCTCGTGGTCGTTCACGATAGTGTCTTTAGCCCTTGCAAGCCTTATATATTATTATGTGTGCCTTAGAGGTAAGGCTGGAGACTGGGGTGATGGTTTCAAGAGTGCATATTTCCAACTTGCTCTCCGTAGTCTTCGTTCCCTTGGAGCGAGCCAAGTTCATCCAAAGAATTGGTATCCCATTCCCTTGATATTTTGCCGGCCGTGGGGAAAGCTGCCGGAAAATGTACCCTGTCACCCTAAACTTGCAGACTTTGCTAACTGCATGAAGAAAAAAGGCCGTGGTATGTCCATATTTGTTTCCATTTTAGATGGAGATTACCATGAACGAGTTGAAGATGGAAAAGCTGCCTGCAAGCAGCTTGCTACCTATATTGATTACAAACGTTGTGAAGGTGTGGCAGAGATCGTTGTGGCTCCCACAATGTCTGAAGGTTTCCGAGGGATCGTTCAGACAATGGGTCTTGGAAATCTCAAGCCGAATATTGTAGTCATGCGATATCCTGAAATATGGCGTCGTGAAAATCTAATAGAAATTCCGGCTACTTTTGTTGGAATTATCAATGACTGCATTGATGCTAACAAGGCAGTTGTGATTGTTAAGGGTCTGGATGAATGGCCAAATGAATTTCAAAGGCAATATGGAACTATAGATTTGTACTGGATTGTGAGAGATGGTGGTCTTATGCTTCTCCTCTCTCAGCTTCTCCTTACAAAGGAGAGCTTTGAAAGCTGTAAGATTCAGGTGTTCTGCATAGCAGAGGAGGATTCGGACGCTGAGGGCCTCAAAGCTGACGTCAAAAAGTTTTTGTATGATCTACGAATGCAAGCTGAGGTGATTGTTATAACGATAAAATCATGGGACACACAGGTGGAGGGCGGGCAACAAGACGAATCGATGGAAGCCTTCGCCGCCGCCCAAGGAAGGATTGCTAGTTATTTAAGTGAAATGAAGGCAACAGCTGAGAGCAGAGGAACCACACTCATGGCTGATGGCAAGCCTGTTAGTGTGAATGAGCAGCAGGTCGAGAAGTTTCTAAATACAACTCTTAAGTTGAATTCAACAATTCTGAGATACTCGAGGATGGCTGCGGTCGTGCTCGTCAGTCTCCCGCCGCCTCCTGTCAACCATCCTGCATACTTCTATATGGAGTACTTGGATTTGTTGGTTGAGAACGTGCCTAGGCTCTTGATCGTAAGAGGATACCGTCGAGACGTCGTAACCTTGTTCACTTAG 2946 43.99 MDNGDIESGEEEFHGQRGRKYRPVEAHDRAVLEMSSMDPGSSSSSSSVPPIRHPSLKKVKVGSQTGTEKEGNSPTRIDVNGPQRESKLEFFGFDSLVNILGLKSMMGEQIQAPSSPRDGENVSMTQGLPKTNEVKSGTLMGVFIPCLQNILGIIYYIRFSWIVGMAGIGESLVLVAFCGLCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLNAVPAAGIFRETVTKVNGTTVEPIQSPSSHDLQVYGIIVTILLCFIVFGGVKMINRVAPAFLIPVLFSVLCIFLGVFLAGKNDPTEGVTGLSLESFKENWSSDYQMTNSAGIPDPLGKVYWNFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPIGTLAATLTTTVLYLVSVLLFGALATRKKLLTDRLLTATVAWPFPAIIYVGIILSTLGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPYFATLFTAFLCIGCVIIGNLDLITPTVTMFFLLCYAGVNLSCFLLDLLDAPSWRPRWRFHHWSLSLLGASLCVVIMFLISWSFTIVSLALASLIYYYVCLRGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHERVEDGKAACKQLATYIDYKRCEGVAEIVVAPTMSEGFRGIVQTMGLGNLKPNIVVMRYPEIWRRENLIEIPATFVGIINDCIDANKAVVIVKGLDEWPNEFQRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQVFCIAEEDSDAEGLKADVKKFLYDLRMQAEVIVITIKSWDTQVEGGQQDESMEAFAAAQGRIASYLSEMKATAESRGTTLMADGKPVSVNEQQVEKFLNTTLKLNSTILRYSRMAAVVLVSLPPPPVNHPAYFYMEYLDLLVENVPRLLIVRGYRRDVVTLFT* 982
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4464316 4477740 + Chy12G209800.1 Chy12g00380 238161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00380 981 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 13 980 IPR004842 GO:0006811|GO:0015377|GO:0016021
Chy12g00380 981 MobiDBLite consensus disorder prediction 36 51 - -
Chy12g00380 981 Pfam Amino acid permease 141 616 IPR004841 GO:0016020|GO:0055085
Chy12g00380 981 PANTHER CATION-CHLORIDE COTRANSPORTER 1-LIKE ISOFORM X1 13 980 - -
Chy12g00380 981 Gene3D Amino acid/polyamine transporter I 134 598 - -
Chy12g00380 981 MobiDBLite consensus disorder prediction 1 81 - -
Chy12g00380 981 MobiDBLite consensus disorder prediction 8 32 - -
Chy12g00380 981 Pfam Solute carrier family 12 650 771 IPR018491 GO:0006811|GO:0016020|GO:0022857
Chy12g00380 981 Pfam Solute carrier family 12 781 980 IPR018491 GO:0006811|GO:0016020|GO:0022857
Chy12g00380 981 MobiDBLite consensus disorder prediction 60 80 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00380 K14427 - csv:101216218 1867.43