Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy12g00483 | ATGGCAACTACTTGTGATGCTTGTGGTTACCGTAGTTCTGAGCTGAAGCCTGGTGGGCGAATCCCTGAAAAAGGAAAGATAATTAGTCTATGTGTGAAGAATGTTAGAGATCTCAGTCGAGATGTAATAAAGTCAGATACTGCAAGCGTAAAAGTCCCAGATCTTGAGTTGGAGCTGACTAGTGGTACTCTTGGGGGAATTGTTACAACTGTTGAAGGCTTAATCACAAAGATAAGTGAAAGTCTTGAGAGAGTACATGGATTTACTTTTGGAGACAGTCTTGATGAAAATAAAAGAAACAAGTGGTTGGACTTCAAAACAAGACTAACCAAGCTCTTGAGTTTGGAGCAGCCTTGGACTCTAATCCTTGATGATGCCTTAGCAAATTCGTTTATTGCACCAGTGACTGATGATATGAAAGATGACCATCAGTTAACATTCGAGGAGTACGAGCGATCGTGGGAACAGAACGAGGAACTCGGTTTGAACGACATGGACACCTCAGCTGCTGATGCTGCTTATGAGTGA | 528 | 42.23 | MATTCDACGYRSSELKPGGRIPEKGKIISLCVKNVRDLSRDVIKSDTASVKVPDLELELTSGTLGGIVTTVEGLITKISESLERVHGFTFGDSLDENKRNKWLDFKTRLTKLLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTFEEYERSWEQNEELGLNDMDTSAADAAYE* | 176 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 6291117 | 6303626 | - | Chy12G210830.1 | Chy12g00483 | 238264 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy12g00483 | 175 | SMART | zpr1 | 1 | 134 | IPR004457 | GO:0008270 | |
Chy12g00483 | 175 | Pfam | ZPR1 zinc-finger domain | 1 | 132 | IPR004457 | GO:0008270 | |
Chy12g00483 | 175 | Gene3D | ZPR1, A/B domain | 20 | 162 | IPR042451 | - | |
Chy12g00483 | 175 | PANTHER | ZINC FINGER PROTEIN ZPR1-RELATED | 1 | 174 | - | - | |
Chy12g00483 | 175 | PANTHER | ZINC FINGER PROTEIN ZPR1 | 1 | 174 | IPR040141 | - | |
Chy12g00483 | 175 | TIGRFAM | ZPR1_znf: ZPR1 zinc finger domain | 1 | 166 | IPR004457 | GO:0008270 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy12g00483 | Chy-Chr12:6291117 | Chy12g00484 | Chy-Chr12:6305060 | 3.84E-16 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy12g00483 | K06874 | - | csv:101208000 | 345.51 |