Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00484 ATGGCCGCAAAAGATGCAGAGGAAGTCTTGGACGTCCAGTCGGTCGTTGAAGCTGTAGTTGCAAATGAAGACGCTGCTGATGTTCCTAGCTACGAAGTAGAAAGCCTCTGCATGCGATGCGGTGAAAACGGGATAACAAGATTTTTATTAACTTTAATTCCGCACTTCAGAAAGATTTTGTTGTCAGCCTTTGAATGTCCACATTGTGGTGAGAGGAACAATGAAGTTCAGTTTGCTGGTGAGATCCAGCCACGAGGCTGTTGCTACTGTTTGGGGGTTCATGCAGGCGACCAGAAGATGCTCAATCGACAAGTGGTTAAATCTGAATCTGCCATTATTAAGATCCCAGAATTGGATTTTGAAATTCCAGCAGAGGCTCAACGTGGAACTCTATCAACTGTTGAAGGTATATTGGTACGAGCTGTAGATGAATTGGAAGCCCTTCAAGAGGAACGTAGGAAGGTGGATCCTCAGACTGCTGAAGCAATAGACCATTTTCTTCTGAAACTAAAAGCTTGTGCTAAGGGAGATTCATCTTTCTCCTTCATCTTGGATGATCCAGCTGGAAACAGCTTCATTGAGAACCCATTTGCACCATCCAAAGATCCATCATTAAGTATCAAGTTTTATGAGCGGACTCCAGAACAACAAGCATCGTTAGGGTATTATGTTGAACCATCACAACCAGCAGAAGCTCAGGGTGGAGCATCAACAGGTGGAGTTGATGCTTCTAATCAAGTTAGAGGAGAGGCACATGGATCTGTAGGAGCAAAGGCTGGCCATCGGGCAATAGCTCAAAGTAACAGTGCAGAGATTGCTGAGGCCTTTTTTCGTTACACTGCACCAGAAGAA 852 44.72 MAAKDAEEVLDVQSVVEAVVANEDAADVPSYEVESLCMRCGENGITRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCCYCLGVHAGDQKMLNRQVVKSESAIIKIPELDFEIPAEAQRGTLSTVEGILVRAVDELEALQEERRKVDPQTAEAIDHFLLKLKACAKGDSSFSFILDDPAGNSFIENPFAPSKDPSLSIKFYERTPEQQASLGYYVEPSQPAEAQGGASTGGVDASNQVRGEAHGSVGAKAGHRAIAQSNSAEIAEAFFRYTAPEE 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 6305060 6318157 - Chy12G210840.1 Chy12g00484 238265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00484 284 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 3 284 - -
Chy12g00484 284 Pfam ZPR1 zinc-finger domain 35 194 IPR004457 GO:0008270
Chy12g00484 284 Gene3D ZPR1, zinc finger domain 27 80 IPR042452 -
Chy12g00484 284 Gene3D ZPR1, A/B domain 81 222 IPR042451 -
Chy12g00484 284 PANTHER ZINC FINGER PROTEIN ZPR1 3 284 IPR040141 -
Chy12g00484 284 SMART zpr1 35 195 IPR004457 GO:0008270
Chy12g00484 284 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 37 219 IPR004457 GO:0008270
Chy12g00484 284 Coils Coil 131 151 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy12g00483 Chy-Chr12:6291117 Chy12g00484 Chy-Chr12:6305060 3.84E-16 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00484 K06874 - csv:101208000 544.273