Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00528 ATGGCTTTCCGGGCCTTTTTCTTGCTGTTTTTCTTCTTCATCTTTGGTTCTATTCCATTTGTTCGTGCTCTTACTGATGCTTCTGATGTTCAAGCTTTGCAAGTTATGTACACCTCATTGGACAGTCCTCCTCAGCTCACTGGTTGGATTGTTAGTGGAGGCGATCCATGTGCAGAATCATGGAAAGGGGTGACTTGTGAAGGGTCTGCCGTTGTCTCCATTGAGATTTCTGGGTTAGGGCTGAATGGAACGATGGGTTATGCGCTTTCGAGTTTTTTGTCACTGAAAAAGCTTGATATGAGCGACAACAATATTCATGACGCGATTCCTTACCAATTGCCGCCGAACCTCACGAGCCTAAATATGGCAAAAAACAGCTTAATTGGTAATCTTCCTTATTCCTTTTCCACCATGGCTTCTCTCAATTATTTGAATATGAGCCACAATTTGCTATCTCAGGTGATAGGAGATGTTTTCACCAATCTTACTACCCTCGGAACCTTGGACCTTTCTTTCAACAATTTTACTGGGGATCTTCCCAAGTCCTTGGGAACTTTGTCTAATGTTTCTTCCCTGTTTTTGCAGAACAACCGATTGACTGGCTCTCTCAATATTCTTATCGATTTGCCTCTGACCACTCTAAATGTAGCAAATAATAATTTCAGTGGATGGATACCCCAAGAACTGAAGTCGGTTGAAAGTTTCATTTATGATGGAAATTCATTTGACAATAGTCCTGCACCTCCTCCACCGCCTTTTACCCCACCTCCTCCTGGTAGATCTCGTAACAGCCCCAAACATCCTGGGTCTAGCGGTGGCACCCATACTGCACCAAGTTCTGAGGGCAGCTTATCCCACTCGAACAAAGGCTTGCCAGTTTTGGCTATAGTGGGGATAGTTTTGGGTGCTATAATTTTTGTCCTCATTGTGTTAGTTGCTTTTGCTGTCTGCTTCCAGAAGAGAAAACGAAAGAACATTGGTCTAAGAGCTTCCAGTGGAAGGCTGTCTATTGGCACTAGCGTGAATGCTGAGGTGCAAGAGCATCGTGTAAAAAGCGTTGCTGCTGTTGCCGATATTAAGCCTCTTCCTGCAGAGAAAATGAATCCTGAGAGATTACAAGCAAAGAATGGATCAGTCAAAAGAATAAAAGCCCCTATTACTGCTACTTCTTACACTGTTGCTTCGCTTCAAACTGCAACAAATAGTTTTAGCCAAGAATGCATAGTTGGTGAAGGTTCACTTGGCCGTGTTTACAAAGCTGAGTTTCCTAACGGAAAGACAATGGCGATTAAGAAAATCGATAATTCAGCGCTGTCACTTCAGGAAGAAGACAATTTTCTTGAAGCGGTTTCGAATATGTCAAGATTGAGGCATACAAACATTGTCACACTGAACGGTTATTGTGCAGAGCATGGTCAGCGTCTTCTAGTTTACGAGTTCATTGGACATGGAAGTTTACATGACATGCTCCATTTTGCTGAAGAAAGTAGTAAGACACTGACTTGGAATGCACGTGTCCGGGTAGCACTTGGAACTGCTAGAGCTTTAGAATACTTGCATGAGGTTTGCTTGCCTTCTGTTGTACATAGAAACTTGAAGACTGCAAACATATTGCTTGATGAAGATCTCAACCCCCATTTGTCAGATTGTGGTTTGGCTGCTTTAACACCCAACACAGAGCGGCAGATTTCTACTCAGATGGTTGGTTCATTTGGTTATAGTGCTCCAGAATTCGCCTTGTCAGGAATATACACCGTCAAGAGTGATGTGTACAGCTTTGGGGTGGTGATGTTGGAGCTCTTGACTGGCCGAAAGCCACTTGACAGTTCCAGAGTGAGATCAGAGCAGTCACTCGTTAGATGGGCGACCCCTCAACTTCATGATATTGATGCCTTAGCAAAAATGGTAGATCCTACTTTGAATGGAATGTACCCTGCGAAATCTCTGTCACGCTTTGCGGACATCATTGCTCTCTGTGTTCAGCCCGAGCCTGAGTTTCGACCTCCCATGTCTGAAGTAGTACAAGCATTGGTGCGTCTAGTGCAAAGAGCCAGTGTGGTAAAAAGGCATTCGAGTGATGAGTCGGGATTCAGCTACAAAACACCCGAGCATGATGCAGTTGAGTTGCCATTTTGA 2136 44.01 MAFRAFFLLFFFFIFGSIPFVRALTDASDVQALQVMYTSLDSPPQLTGWIVSGGDPCAESWKGVTCEGSAVVSIEISGLGLNGTMGYALSSFLSLKKLDMSDNNIHDAIPYQLPPNLTSLNMAKNSLIGNLPYSFSTMASLNYLNMSHNLLSQVIGDVFTNLTTLGTLDLSFNNFTGDLPKSLGTLSNVSSLFLQNNRLTGSLNILIDLPLTTLNVANNNFSGWIPQELKSVESFIYDGNSFDNSPAPPPPPFTPPPPGRSRNSPKHPGSSGGTHTAPSSEGSLSHSNKGLPVLAIVGIVLGAIIFVLIVLVAFAVCFQKRKRKNIGLRASSGRLSIGTSVNAEVQEHRVKSVAAVADIKPLPAEKMNPERLQAKNGSVKRIKAPITATSYTVASLQTATNSFSQECIVGEGSLGRVYKAEFPNGKTMAIKKIDNSALSLQEEDNFLEAVSNMSRLRHTNIVTLNGYCAEHGQRLLVYEFIGHGSLHDMLHFAEESSKTLTWNARVRVALGTARALEYLHEVCLPSVVHRNLKTANILLDEDLNPHLSDCGLAALTPNTERQISTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRHSSDESGFSYKTPEHDAVELPF* 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7317261 7322369 + Chy12G211280.1 Chy12g00528 238309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00528 711 Pfam Protein tyrosine and serine/threonine kinase 408 677 IPR001245 GO:0004672|GO:0006468
Chy12g00528 711 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Chy12g00528 711 SUPERFAMILY Protein kinase-like (PK-like) 384 677 IPR011009 -
Chy12g00528 711 SUPERFAMILY L domain-like 25 231 - -
Chy12g00528 711 ProSiteProfiles Protein kinase domain profile. 403 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g00528 711 MobiDBLite consensus disorder prediction 264 284 - -
Chy12g00528 711 MobiDBLite consensus disorder prediction 241 284 - -
Chy12g00528 711 Pfam Leucine rich repeat 115 175 IPR001611 GO:0005515
Chy12g00528 711 CDD STKc_IRAK 409 680 - -
Chy12g00528 711 Gene3D Transferase(Phosphotransferase) domain 1 482 704 - -
Chy12g00528 711 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 702 - -
Chy12g00528 711 Gene3D Ribonuclease Inhibitor 25 253 IPR032675 -
Chy12g00528 711 MobiDBLite consensus disorder prediction 244 263 - -
Chy12g00528 711 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8-LIKE ISOFORM X1 10 702 - -
Chy12g00528 711 Gene3D Phosphorylase Kinase; domain 1 364 480 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00324 Chy-Chr2:2101640 Chy12g00528 Chy-Chr12:7317261 9.15E-180 dispersed
Chy03g00317 Chy-Chr3:3599734 Chy12g00528 Chy-Chr12:7317261 0 dispersed
Chy04g01763 Chy-Chr4:23994227 Chy12g00528 Chy-Chr12:7317261 2.02E-123 dispersed
Chy04g01764 Chy-Chr4:24002657 Chy12g00528 Chy-Chr12:7317261 2.98E-180 dispersed
Chy12g00528 Chy-Chr12:7317261 Chy04g02100 Chy-Chr4:26381217 6.74E-88 dispersed
Chy12g00528 Chy-Chr12:7317261 Chy04g00715 Chy-Chr4:8714168 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71610 PF00069 Pkinase 3.60E-44 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00528 - - csv:101216091 1341.25