Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00648 ATGCATTTGGAGAAAAATGGTGTAATTCCCCCTTCTTCTCCTTGGCGGAGGGCTAAATTTGGAAAAGATGTCATTATTGCCAATCTTGACACAGGTGTATGGCCAGAGTCAAAGAGTTTTGGAGAACATGGCATAGTTGGACCTGCCCCATCAAAGTGGAAAGGAGGTTGTACTGATGATAAAACCCCTGATGGAGTGCCTTGTAACCAAAAATTAATTGGAGCAAAGTACTTCAACAAGGGCTACTTCGAGTACTTGAAATCTGAAAATTCCACTGTTGACCTCTCATCTATCATCAACTCCACTCGCGACTACAACGGTCATGGCTCCCACACACTGTCCACGGCTGGTGGCAACTATGTGGTCGGCGCCAGCGTGTTTGGGTCGGGTATCGGAACAGCTAAAGGAGGATCTCCAAAGGCTCGTGTTGCTGCTTATAAGGTTTGTTGGCCATTCGAGCATGGTGGTTGCTTCGATGCTGACATCACAGAGGCATTTGACCATGCCATCCACGATGGTATCGATGTTCTTTCACTCTCTCTCGGCAGTGATGCCGTCAAATACTCCGAGGATTCCATCGCCATTGCCTCCTTCCATGCAGTGAAGAAGGGAATTCCTGTCGTGTGCGCTGTCGGGAACTCTGGTCCCATACCGAAGACGGCTTCTAATACCGCTCCTTGGATTTTGACTGTTGGTGCAAGTACTTTGGATCGTGAATTTTATGCTCCTGTTGTGCTTCGAAATGGTTATAGGTTCATGGGTTCAAGTCATTCAAAAGGATTAAGGGGAAGGAAGCTATACCCATTGATAACCGGAGCTCAGGCAAAAGCAGGTAACGCCACCGAGGACGATGCCATGCTTTGCAAGCCCGAAACATTGGACCATTCAAAAGTGAAAGGGAAGATATTGGTTTGCTTGAGAGGAGAAACGGCAAGGTTGGACAAAGGAAAACAAGCGGCCCTTGCCGGTGCTGTTGGAATGATTTTATGCAACGATAAGCTCAGTGGGACTTCCATCAACCCCGATTTTCATGTTCTTCCAGCTTCTCATATCAATTACCATGATGGTCAAGTTCTTCTATCTTACATCAACTCCGCCAGAAATCCAATGGGGTGTTTAGTCCCACCATTGGCAAGAGTTAACACCAAACCAGCTCCCACTATGGCGGTCTTCTCATCCCGAGGACCCAATACTATTTCACCAGAGATTATCAAGCCTGATGTGACCGCTCCAGGAGTAGACATAATTGCGGCATTTTCAGAAGCTATAAGTCCAACTCGCGATCCATCTGACAACAGAACAACTCCATTCATTACAATGTCAGGTACCTCCATGTCTTGCCCCCACGTCACTGGCCTCGTCGGCCTCCTCCGAAATCTCCACCCTGATTGGACCCCCTCCGCCATTAAATCTGCCATCATGACCTCAGCCCAAGTTCGTGACAACACCTTGAACCCCATGCTCGATGGGGGATCTCTTGACCTCGACCCTGCCACTCCATTTGCATATGGCTCCGGCCACATCAACCCTAATGGAGCCATTGACCCCGGCCTTGTCTACGACCTCTCCCCCAACGACTACTTGGAATTCCTCTGTGCCAGCGGCTACGACGAGAGGACCATTCGTGCATTCTCTGATGAACCTTTCAAATGTCCTGCTTCTGCTTCTGTTTTGAACCTTAATTACCCTTCCATTGGGGTTCAAAATTTGAAAGATAGTGTCACTGTCACTAGAAAACTGAAGAACGTTGGCACTCCTGGAGTTTATAAAGCCCAGATTCTCCACCCCAACGTAGTTCAGGTTTCTGTGAAGCCCAGATTTTTGAAGTTTGAGAGAGTTGGAGAAGAGAAGAGCTTTGAGTTGACGCTCACTGGAGTTGTGCCAAAGAATCATTTTGCTTACGGCGCTTTGATTTGGAGTGATGGCAGACACTTTGTCAGGAGTCCCATTGTTGTTTCTTCGGGCTTATTCTGA 1974 47.92 MHLEKNGVIPPSSPWRRAKFGKDVIIANLDTGVWPESKSFGEHGIVGPAPSKWKGGCTDDKTPDGVPCNQKLIGAKYFNKGYFEYLKSENSTVDLSSIINSTRDYNGHGSHTLSTAGGNYVVGASVFGSGIGTAKGGSPKARVAAYKVCWPFEHGGCFDADITEAFDHAIHDGIDVLSLSLGSDAVKYSEDSIAIASFHAVKKGIPVVCAVGNSGPIPKTASNTAPWILTVGASTLDREFYAPVVLRNGYRFMGSSHSKGLRGRKLYPLITGAQAKAGNATEDDAMLCKPETLDHSKVKGKILVCLRGETARLDKGKQAALAGAVGMILCNDKLSGTSINPDFHVLPASHINYHDGQVLLSYINSARNPMGCLVPPLARVNTKPAPTMAVFSSRGPNTISPEIIKPDVTAPGVDIIAAFSEAISPTRDPSDNRTTPFITMSGTSMSCPHVTGLVGLLRNLHPDWTPSAIKSAIMTSAQVRDNTLNPMLDGGSLDLDPATPFAYGSGHINPNGAIDPGLVYDLSPNDYLEFLCASGYDERTIRAFSDEPFKCPASASVLNLNYPSIGVQNLKDSVTVTRKLKNVGTPGVYKAQILHPNVVQVSVKPRFLKFERVGEEKSFELTLTGVVPKNHFAYGALIWSDGRHFVRSPIVVSSGLF* 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 9284851 9287798 + Chy12G212480.1 Chy12g00648 238429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00648 657 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 655 IPR045051 -
Chy12g00648 657 Pfam Fibronectin type-III domain 559 652 IPR041469 -
Chy12g00648 657 Pfam PA domain 284 358 IPR003137 -
Chy12g00648 657 Gene3D - 237 381 - -
Chy12g00648 657 Pfam Subtilase family 21 489 IPR000209 GO:0006508|GO:0008236
Chy12g00648 657 Gene3D - 531 655 - -
Chy12g00648 657 CDD Peptidases_S8_3 11 477 IPR034197 -
Chy12g00648 657 ProSiteProfiles Serine proteases, subtilase domain profile. 1 514 - -
Chy12g00648 657 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 4 655 - -
Chy12g00648 657 ProSitePatterns Serine proteases, subtilase family, serine active site. 442 452 IPR023828 -
Chy12g00648 657 Gene3D Peptidase S8/S53 domain 23 527 IPR036852 GO:0004252|GO:0006508
Chy12g00648 657 CDD PA_subtilisin_like 244 371 - -
Chy12g00648 657 PRINTS Subtilisin serine protease family (S8) signature 21 40 IPR015500 -
Chy12g00648 657 PRINTS Subtilisin serine protease family (S8) signature 441 457 IPR015500 -
Chy12g00648 657 PRINTS Subtilisin serine protease family (S8) signature 104 117 IPR015500 -
Chy12g00648 657 SUPERFAMILY PA domain 295 366 IPR046450 -
Chy12g00648 657 SUPERFAMILY Subtilisin-like 14 518 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy12g00648 Chy-Chr12:9284851 Chy02g01279 Chy-Chr2:9390286 5.05E-173 dispersed
Chy12g00647 Chy-Chr12:9263042 Chy12g00648 Chy-Chr12:9284851 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00648 - - csv:101213345 1313.13