Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00718 ATGTATATGCAGCTAGCCACTATTGTGGAAGTGGACATGACTCAAGTGTATATAGTGTACTTAGGGCACAACCGTTTGAATGACGATGCAACTTTGACCTCCAAGTACCATCTTCATCTACTATCAAAAGTGTTTCGAAGTGAAGAAGATGGTAAAAGAGCCATGTTGTATAGCTACAAGAAAAGTTTTTCAGGGTTTTCAGCAAAGCTTAATGCAAGCCAAGCAATTGCATTATCAAAGATGGAAGACGTGATATCTGTATTTGAGAGTAGAACAATGAAACTCCACACAACAAGAAGTTGGGATTTCTTGGGACTTCCAATTCCCTCCTATACTAATAATAGAAGTACACTATTTTCGCTTCACCTTCCTAGCTATGGCGATCATGACGTTGTTGTTGGCATATTTGATTCAGGTGTGTGGCCCGAATCAAAAAGTTTTGAAGAGAGTGAAGGAATAGGGAGAATTCCATGCAACTGGAAAGGGAAATGCGTTAAAGGATACAGATTCAACCCAACATCAGCCTGCAACCGCAAACTAATTGGCGCTCGGTATTATCTTAAAGGCTTCGAAGCCCAATATGGAGCACTAAACACCACCGCCAACAACCCCGAGTTCCTCTCCCCTCGAGACTTCTTAGGTCACGGCACTCACACCGCTTCCACCGCGGTGGGTGCCGTTGTGCACAATGTTGGCTTCCCTACATCTTCATCACTAGCCAAAGGCACTGCTAGAGGGGGCGCGCCCTGGGCCAGGCTGGCGGTGTACAAGGTGTGTTGGGGGAAGGACTACGAAGGCAAGTGCACGGATGCGGATGTCATGGCTGCTTTCGACGACGCTTTGCATGACGGGGTGGACGTGATCTCCGCATCTTTTGGAGAGACGCCGCCGTTGATTCCATTGTTCGAGTCGGCTTCTGCTATTGGCTCATTCCATGCGATGCAGAGGGGAGTGAGTGTGGTGTTCTCAGCTGGGAACGATGGATCCCACCCTTCCCTTGTTCAAAATGTTTCTCCTTGGAGTATTTGTGTTGCTGCTTCTACTATGGATCGATCCTTCCCCACTCCAATATTTATCCTCAACCACTTCTCTATCATGGGGGAGAGCTTGATCACAAGAAATATAATAAACGTAAAGTTGGCAGATGCAATCAACTATTTCAATGATGGAATTTGCGAGAGAGAAAATATAAGAAAAGGTGGAAAATCAGGTAAAGGGAAAGTGGTCTTGTGTTTCTCAACAATTGGTCAAGTTTCCATAGCAACTGCTCAAGAAGCAGTGAAAGCCATAAATGCATCAGCTTTAATATTTGGTGCACCTCCCACTACGGAGCTCCCCGATTTAGATCTAATCCCCACCGTTCGTATTGACATTGATCAAGCTACTCAAATTCGAAACTTCCTTGCTGAATTACCCAGACTGCCTATGGTCGAGATTGGAGTTGCGAGAAGTGTGATCGGAAAATCTGTAGCTCCTACTGTGGCTTACTTTTCGTCTAGAGGACCAAGCTCTATTTTACCTGACATTCTCAAGCCAGATATAAGTGCACCGGGAGTGAATATATTGGCAGCATGGCCTCCAGAAACAGCACCGACGGTGAGGCCAAGTGGAAAGATTAATGAAGAAGAAGAAGAAGAAGGCGTAAAATGGAATTTCCAATCAGGAACTTCAATGTCATGTCCGCACGTTTCTGGGGTTGTTGCTCTCATCAAATCTGTCCATCCCGATTGGTCTCCTGCAGCGATTAGATCAGCCATTATCACCACAGCCACAAAGATAGACAGCAGTGGGAATACCATCCTAGCAGGCGGATCCATGAAAGCATCAGACCCATTCGACATTGGTGCAGGTCAAGTGAATCCCATAATGGCAATAAATCCAGGACTAATCTATGACATAACAACCAATGATTACATTACTTTCCTATGCAATATTGGCTACACTGACCAACAAATCAACAACTTAATTCTCAACCCTTCTCCTCATTTTTGTTGTCGTCAAACCACTGCTACCATTGCAAACTTTAATTATCCGACAATTACACTCGCCAATCTTCGCTCCACCACCACAATTAGAAGAATTGTCCGCAATGTATCACTCAACAAGAACGCTATTTACTTTCTTAGGGTTCTTCCTCCCTATGGAGTTCGAGTACAGGTTTGGCCAAGGGTTCTCTTTTTCTCTTGCTATAGGCAACAAATTTCATACTATATTACTATAACTCCGCTTAGGAAATCTCGAGGAAGATATGGTTTTGGGGAGATTCAATGGTTTAATCGCTTCCATACTGTTACAAGTCCTCTCGTTGTACGTCTTGCTACTTAG 2325 44.47 MYMQLATIVEVDMTQVYIVYLGHNRLNDDATLTSKYHLHLLSKVFRSEEDGKRAMLYSYKKSFSGFSAKLNASQAIALSKMEDVISVFESRTMKLHTTRSWDFLGLPIPSYTNNRSTLFSLHLPSYGDHDVVVGIFDSGVWPESKSFEESEGIGRIPCNWKGKCVKGYRFNPTSACNRKLIGARYYLKGFEAQYGALNTTANNPEFLSPRDFLGHGTHTASTAVGAVVHNVGFPTSSSLAKGTARGGAPWARLAVYKVCWGKDYEGKCTDADVMAAFDDALHDGVDVISASFGETPPLIPLFESASAIGSFHAMQRGVSVVFSAGNDGSHPSLVQNVSPWSICVAASTMDRSFPTPIFILNHFSIMGESLITRNIINVKLADAINYFNDGICERENIRKGGKSGKGKVVLCFSTIGQVSIATAQEAVKAINASALIFGAPPTTELPDLDLIPTVRIDIDQATQIRNFLAELPRLPMVEIGVARSVIGKSVAPTVAYFSSRGPSSILPDILKPDISAPGVNILAAWPPETAPTVRPSGKINEEEEEEGVKWNFQSGTSMSCPHVSGVVALIKSVHPDWSPAAIRSAIITTATKIDSSGNTILAGGSMKASDPFDIGAGQVNPIMAINPGLIYDITTNDYITFLCNIGYTDQQINNLILNPSPHFCCRQTTATIANFNYPTITLANLRSTTTIRRIVRNVSLNKNAIYFLRVLPPYGVRVQVWPRVLFFSCYRQQISYYITITPLRKSRGRYGFGEIQWFNRFHTVTSPLVVRLAT* 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10762028 10767798 - Chy12G213180.1 Chy12g00718 238499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00718 774 CDD Peptidases_S8_3 94 591 IPR034197 -
Chy12g00718 774 Pfam Peptidase inhibitor I9 16 96 IPR010259 -
Chy12g00718 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 555 565 IPR023828 -
Chy12g00718 774 ProSiteProfiles Serine proteases, subtilase domain profile. 100 625 - -
Chy12g00718 774 SUPERFAMILY Subtilisin-like 95 629 IPR036852 GO:0004252|GO:0006508
Chy12g00718 774 Pfam Subtilase family 129 593 IPR000209 GO:0006508|GO:0008236
Chy12g00718 774 Gene3D Peptidase S8/S53 domain 130 638 IPR036852 GO:0004252|GO:0006508
Chy12g00718 774 Gene3D - 642 773 - -
Chy12g00718 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 6 96 IPR037045 -
Chy12g00718 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 12 767 IPR045051 -
Chy12g00718 774 Pfam Fibronectin type-III domain 674 770 IPR041469 -
Chy12g00718 774 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.18 12 767 - -
Chy12g00718 774 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Chy12g00718 774 PRINTS Subtilisin serine protease family (S8) signature 554 570 IPR015500 -
Chy12g00718 774 PRINTS Subtilisin serine protease family (S8) signature 128 147 IPR015500 -
Chy12g00718 774 Gene3D - 350 486 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01221 Chy-Chr7:17004907 Chy12g00718 Chy-Chr12:10762028 7.78E-100 dispersed
Chy12g00718 Chy-Chr12:10762028 Chy06g01923 Chy-Chr6:23142590 6.88E-130 dispersed
Chy12g00718 Chy-Chr12:10762028 Chy01g00548 Chy-Chr1:3921594 1.71E-157 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00718 - - csv:101206755 1464.9