Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00733 ATGAATAATCCATTTTTGGATCCTGGCTTCCACCTCTCCTTCTGTATTTTCTGTTACAACAAAGGAACAATGGCGGACGAAGTTCAGAATGATGTGAATGATCAGGTTGCAGATATTGCCCCCTTTGATCCAACTAAGAAGAAGAAGAAGAAGAAGGTTGTACTTCAGGATCCGACTGATGAGAGTGTTGACAAGTTAGCAGAGAAAACTGAAAGTTTGTCAGTTTCTGATGGTTTGGAGGCTACAACATTTTCTGGACTTAAAAAGAAGAAGAAAAAACCAGTAGAGGCAAGCTCCTTGAATGAAGATGGTGCAGATGCTACGGAGGATTTGGAAGATCAAGCGGGGGAAAATGAAGATCGTGAGGGACTTGTTCTACAGTATCGTTATCCTTGGGAGGGAACTGATCGCGATTATGAATACGAGGAGCTTCTTGGACGGGTATTCAACATCCTTAGAGAGAATAATCCAGAGCTTGCAGGCGATAGGCGTAGAACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTCAATTTCATGGATCTATGTAAAACGATGCATCGGCAGCCAGACCATGTTATGGCTTTCTTACTAGCTGAACTTGGAACCAGTGGCTCTCTTGATGGACAGCAGAGACTAGTTGTTAAAGGAAGGTTTGCACCAAAGAACTTTGAAGGAATTCTGCGTCGATATGTCAATGAATATGTGATTTGCATTGGGTGCAAGAGTCCAGATACTATCCTTTCAAAGGAGAACCGGCTTTTCTTTCTCAGATGCGAGAAGTGTGGTTCTGGACGATCAGTTGCTCCAATTAAAGCTGGGTTTGTTGCTCGTGTTGGCCGGAGGAACACTGGGACATGA 882 43.42 MNNPFLDPGFHLSFCIFCYNKGTMADEVQNDVNDQVADIAPFDPTKKKKKKKVVLQDPTDESVDKLAEKTESLSVSDGLEATTFSGLKKKKKKPVEASSLNEDGADATEDLEDQAGENEDREGLVLQYRYPWEGTDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT* 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11079527 11086770 - Chy12G213330.1 Chy12g00733 238514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00733 293 MobiDBLite consensus disorder prediction 103 117 - -
Chy12g00733 293 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT 24 293 - -
Chy12g00733 293 MobiDBLite consensus disorder prediction 53 71 - -
Chy12g00733 293 Pfam Domain found in IF2B/IF5 162 271 IPR002735 GO:0003743|GO:0006413
Chy12g00733 293 MobiDBLite consensus disorder prediction 86 122 - -
Chy12g00733 293 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 24 293 IPR045196 GO:0003743|GO:0006413
Chy12g00733 293 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 242 277 IPR016190 GO:0003743|GO:0006413
Chy12g00733 293 Gene3D - 136 278 - -
Chy12g00733 293 SMART eIF2Bneu4 163 272 IPR002735 GO:0003743|GO:0006413
Chy12g00733 293 MobiDBLite consensus disorder prediction 45 72 - -
Chy12g00733 293 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 138 245 IPR016189 GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01012 Chy-Chr3:13669527 Chy12g00733 Chy-Chr12:11079527 1.01E-07 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00733 K03238 - csv:101220978 528.48