Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00750 ATGTCCACTGACGAGGAGCAGTGGAGTGAATCTGATGCGTTTGTCTCCGATGTCGACGAAGGGGGAGATCTTGAGGATGACATTGATATTAGTGTTCGGGAAGATAGCACTGTGGCCACTGCTGCTTCTGCGCAGAGGATTTCTTCTTCTCCGAGTGATTTTCTCTCGCTTGCGATTCGTGAGCAGGTTTATGAGGTGTTAGAGGTTAAAGCTGATGGAACCGTATCCACCAGGAAGGTTAACAGACGGCAGCTGTTGAAGTCAAGTGGGCTTCGTCCTCGTGATGTCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTACGTGAACATGCTATTTTGCTTAATCTGGGATCGTTGCGAGCAATAGCCATGCAGGATTGTGTCCTCATATTCGATTATAACCGTCCAGGAGGACAAGCTTTTATTGAATCATTGTTGCCTCGATTGAACCCAAAAAACATGAATGGGGTGCCAGCAATGCCATTTGAACTCGAGGTTGTTGAAGCTGCATTGCTTTCACGAACTCAGCGTTTGGAGCAACGACTAATGAAAGTAGAACCTCGTGTTCAAGCTCTGCTTGAGGTATTGCCCAACAAATTAACTGCAGATGTGTTGGAACAACTTCGTATTAGCAAGCAGACATTGGTTGAATTAGGTTCCAGAGCAGGGGCTCTCAGACAAATGCTTCTTGATCTTCTGGAGGATCCGCTAGAAATACGGCGCATCTGTATTATGGGTAGAAATTGCACGCTGAATAAAAGAAATGATGATGTGGAGTGCACTCTTCCTTTGGATAAGCAGATTGCTGATGACGAGGAAGAAGAAATAGAAATGCTGTTGGAAAATTATCTCCAGAGATGCGAATCTTGTCATGGTCAGGCTGAAAGGCTTCTGGATTCTGCAAAAGAAATGGAAGATTCAATTGCCGTAAATTTAAGCTCGCGGAGACTAGAGGTTAGCAGAGTGGAATTGCTTCTCCAAGTTGGGACATTTTGTGTGGCAGTTGGTGCTTTAGTTGCAGGAATATTCGGCATGAACTTACGATCATACCTTGAAGAACACGTGTTTGCCTTTTGGTTAACAACAGCTGGGATAATCGTTGGCGCTGTTGTTGCATTCTTTCTCATGTATTCATATCTCAGAGATAGGAGAATCCTATAG 1182 44.25 MSTDEEQWSESDAFVSDVDEGGDLEDDIDISVREDSTVATAASAQRISSSPSDFLSLAIREQVYEVLEVKADGTVSTRKVNRRQLLKSSGLRPRDVRSVDPSLFLTNSMPTLLVREHAILLNLGSLRAIAMQDCVLIFDYNRPGGQAFIESLLPRLNPKNMNGVPAMPFELEVVEAALLSRTQRLEQRLMKVEPRVQALLEVLPNKLTADVLEQLRISKQTLVELGSRAGALRQMLLDLLEDPLEIRRICIMGRNCTLNKRNDDVECTLPLDKQIADDEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHVFAFWLTTAGIIVGAVVAFFLMYSYLRDRRIL* 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11501315 11515159 + Chy12G213500.1 Chy12g00750 238531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00750 393 CDD Mrs2_Mfm1p-like 66 392 IPR039204 -
Chy12g00750 393 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 11 393 - -
Chy12g00750 393 Gene3D Magnesium transport protein CorA, transmembrane region 143 324 - -
Chy12g00750 393 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 11 393 IPR039204 -
Chy12g00750 393 MobiDBLite consensus disorder prediction 1 27 - -
Chy12g00750 393 Pfam CorA-like Mg2+ transporter protein 183 382 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Chy12g00750 393 Gene3D - 56 140 - -
Chy12g00750 393 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 329 384 IPR045863 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy06g01142 Chy-Chr6:9979034 Chy12g00750 Chy-Chr12:11501315 8.30E-11 dispersed
Chy12g00750 Chy-Chr12:11501315 Chy04g01335 Chy-Chr4:19898561 5.87E-17 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00750 K16075 - csv:101219314 712.605