Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00815 ATGGCTTCCTTATCAGTGGCCACCATTTTATCCCGTCTCTCTATTTTGGGGTTTGCATCAAAGTCTTCTTTAAAAAACCCGTTATTGATCTCCTCCAATAGTAGTAGAATCGAGAGATTGAATCGATTGAGACCCTTTTCCATGGCTTCGTCTCCTAAAGAATCTCCAGCCAACAATCCAGGACTTCAGGCTACTCCTGATGATGCCACTAAAGGTTACATCATGCAACAGACTATGTATCGGATTAAGGATCCTAAAGTCAGTCTCGACTTCTATTCTCGAGTTCTGGGAATGTCATTACTCAAGAGGCTGGATTTCCCTGAAATGAAGTTTAGTTTGTACTTTATGGGTTATGAGGATACAGCATCTGCACCAGAAAGCTCAGTTGATAGAACAGTGTGGACTTTTGGTCGAAAGGCTACGATTGAGTTAACACACAACTGGGGTACTGAAAGTGACCCTGAATTCAAAGGATATCATAATGGGAACTCAGATCCTCGTGGCTTTGGACACATTGGCATAACTGTTGATGACACAATTAAGGCATGTGAAAGATTTGAACGCTTAGGTGTGGAATTTGTTAAAAAACCAGATGACGGCAAGATGAAAGGAATTGCATTTATCAAGGATCCTGATGGCTACTGGATTGAAATCTTTGATCTCAAAACTATTGGAAAAGTTACGTCTGAGGCTGCTTAA 699 41.06 MASLSVATILSRLSILGFASKSSLKNPLLISSNSSRIERLNRLRPFSMASSPKESPANNPGLQATPDDATKGYIMQQTMYRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPESSVDRTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTIKACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKTIGKVTSEAA* 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 13237472 13243242 - Chy12G214150.1 Chy12g00815 238596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00815 232 CDD GlxI_Zn 75 219 - -
Chy12g00815 232 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 76 218 IPR004360 -
Chy12g00815 232 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 69 220 IPR029068 -
Chy12g00815 232 Gene3D - 49 227 IPR029068 -
Chy12g00815 232 ProSitePatterns Glyoxalase I signature 2. 162 178 IPR018146 GO:0004462|GO:0046872
Chy12g00815 232 MobiDBLite consensus disorder prediction 51 65 - -
Chy12g00815 232 PANTHER LACTOYLGLUTATHIONE LYASE 33 228 - -
Chy12g00815 232 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 74 221 IPR037523 -
Chy12g00815 232 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 33 228 - -
Chy12g00815 232 MobiDBLite consensus disorder prediction 48 68 - -
Chy12g00815 232 TIGRFAM glyox_I: lactoylglutathione lyase 63 226 IPR004361 GO:0004462|GO:0046872
Chy12g00815 232 ProSitePatterns Glyoxalase I signature 1. 77 98 IPR018146 GO:0004462|GO:0046872
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy12g00815 Chy-Chr12:13237472 Chy12g01070 Chy-Chr12:15824833 2.24E-06 dispersed
Chy12g00815 Chy-Chr12:13237472 Chy05g01383 Chy-Chr5:17901208 5.21E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00815 K01759 - csv:101220380 384.415