Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00832 ATGGTTGCACAACTACCCCCCAGATCCGACGCCGGCCACCCCTGCCGTCCACTCCAATTCCCTTTGCAGGTCATCACCGGTCGCTGGTTCACCGTCTTTGCTACATTTTTAATCATGGCTGGCGCCGGTGCTACCTATCTCTTCGGTGTCTACTCCAAACAGATCAAATCCGCACTTGGGTATGATCAAACCACTTTGAATCTGATGGGCTTTTTCAAAGATCTGGGTGCTAACGTCGGCGTGTTGTCTGGTTTAGTGGCGGAGGTTACGCCCACTTGGTTCGTTCTTCTCCTTGGCTCCGCCTTGAACTTCACCGGTTACTTCATGATTTGGCTTGCCGTCAGCGGCAGAATCGCCAAGCCCAAAGTCTGGCAAATGTGTCTCTACATTTGTGTTGGAGCTAATTCCCAGAATTTTGCTAATACCGGCGCTTTGGTTACTTGTATCCAGAACTTTCCCGAGAGTCGCGGCGCTATGATGGGTCTTTTGAAGGGTTTCACAGGGCTTAGCGGCGCTATTCTCACGGAGATTTATAGGGCCGTTTATGCCGACGATGCCACGGCGTTGATTCTACTTATTGGGTGGCTTCCGGCGGCGATTTCCGTCGTTTTTGTTTTCACCATTCGGAGGCTTAGATCAGAGAGACAACCGAATGAGAAGAGGGTTTTTTACCATTTCCTTTACATCTCAATTGGGTTAGCGGTTTTCATCATGATTATGAATATTGTTCAGAAGAAAGTTCAATTCAATCATACAGCTTATGCTTCAAGTGCTACCGTGATCTGCGCTTTTCTGTTTCTTCCTCTGTTAATTGTGATCCGTGAAGAACTTCGTATCTGGAATACAAAGAAATCTACCTCAGTTCCAATCGAAAGCCCACAACCAAAACCAATCGATGAACCCAAAATCATAACAGAAGAATCAAAACAAATCACTGAGATCCAAAACCAAAACGCAGCAGCACCACCACCAGAGTCCTGTTTCTCCAACATTTGTCATAAACCACCCAGAGGAGACGATTACACAATCCTTCAAGCACTTCTCAGCATCGATATGTTCGTTCTATTCGTCGCAACATTCTGTGGGTTAGGTACAAGCTTAACCGCAGTTGACAATTTAGGACAAATCGGTGAATCACTCGGCTACCCATTAAAAACAGTAAGCTCATTCGTTTCGTTAGTAAGCATTTGGAATTACTTCGGCAGAATATTCGCCGGATTCGTTTCCGAATCCCTTCTCGCAAAATTCAAATTCCCAAGACCATTAATGATGACATTAGTTCTTCTCCTCTCTTGCGTCGGCCAACTCTTAATCGCATTCCCAGTTCCGGGTTCCGTCTACATAGCTTCAGTAATAATCGGATTCTCCTTCGGCGCACAGCTTCCTCTGCTTTTCGCCATAATCTCTGAACTATTTGGACTGAAATATTTCTCCACTTTATTCAATTGTGGGCAAATAGCAAGCCCATTGGGATCGTACATTCTGAATGTGAAGGTGGCGGGAATGTTGTACGATATGGAAGCTTTGAAGCAGTTGAAGGAGAAGGGGTTGGATAGATCGGCGGTGAAGGAATTGATATGCATGGGGAAGCAATGTTACAGGAAATCATTTTCAATAACGGCGATTGTTACGTTTGTTGGAGCAATGGTTTCGTTGATATTGGTGATGAGAACGAGGGAGTTTTACAAAGGGGATATTTACAAAAAGTTTAGGGAAGAAGGAATGAAGAAAGAGGAGATGGTCATCAACGGCGGAGGAGAAGTTACTGCTCGGGAATCTAAGTGA 1785 45.27 MVAQLPPRSDAGHPCRPLQFPLQVITGRWFTVFATFLIMAGAGATYLFGVYSKQIKSALGYDQTTLNLMGFFKDLGANVGVLSGLVAEVTPTWFVLLLGSALNFTGYFMIWLAVSGRIAKPKVWQMCLYICVGANSQNFANTGALVTCIQNFPESRGAMMGLLKGFTGLSGAILTEIYRAVYADDATALILLIGWLPAAISVVFVFTIRRLRSERQPNEKRVFYHFLYISIGLAVFIMIMNIVQKKVQFNHTAYASSATVICAFLFLPLLIVIREELRIWNTKKSTSVPIESPQPKPIDEPKIITEESKQITEIQNQNAAAPPPESCFSNICHKPPRGDDYTILQALLSIDMFVLFVATFCGLGTSLTAVDNLGQIGESLGYPLKTVSSFVSLVSIWNYFGRIFAGFVSESLLAKFKFPRPLMMTLVLLLSCVGQLLIAFPVPGSVYIASVIIGFSFGAQLPLLFAIISELFGLKYFSTLFNCGQIASPLGSYILNVKVAGMLYDMEALKQLKEKGLDRSAVKELICMGKQCYRKSFSITAIVTFVGAMVSLILVMRTREFYKGDIYKKFREEGMKKEEMVINGGGEVTARESK* 595
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 13533243 13535027 - Chy12G214320.1 Chy12g00832 238613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00832 594 Gene3D MFS general substrate transporter like domains 347 563 IPR036259 -
Chy12g00832 594 SUPERFAMILY MFS general substrate transporter 28 560 IPR036259 -
Chy12g00832 594 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 579 - -
Chy12g00832 594 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 16 579 - -
Chy12g00832 594 Pfam Nodulin-like 28 273 IPR010658 -
Chy12g00832 594 CDD MFS_Mch1p_like 27 548 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy07g01584 Chy-Chr7:20019336 Chy12g00832 Chy-Chr12:13533243 1.13E-76 dispersed
Chy10g01292 Chy-Chr10:17404642 Chy12g00832 Chy-Chr12:13533243 0 dispersed
Chy10g01293 Chy-Chr10:17408068 Chy12g00832 Chy-Chr12:13533243 0 dispersed
Chy11g00271 Chy-Chr11:2518261 Chy12g00832 Chy-Chr12:13533243 5.41E-103 dispersed
Chy12g00832 Chy-Chr12:13533243 Chy12g00848 Chy-Chr12:13724354 0 dispersed
Chy12g00840 Chy-Chr12:13670267 Chy12g00832 Chy-Chr12:13533243 0 dispersed
Chy12g00847 Chy-Chr12:13712822 Chy12g00832 Chy-Chr12:13533243 0 dispersed
Chy12g00832 Chy-Chr12:13533243 Chy12g00834 Chy-Chr12:13607372 0 proximal
Chy12g00831 Chy-Chr12:13529092 Chy12g00832 Chy-Chr12:13533243 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00832 - - csv:101217765 1150.58