Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00836 ATGGAAGTTGAAGATGACAACCGAAGGAAACAGCAACTTGTTCTTCTAGCAATCGTTGTTCTTGCTTCTCTCGCTCTCGTTTCTCTTCTCGTTGCTTTTAGCTACTACTGCTATATCAGCAATAAGGTCTCTAAACGCCTCAAGATCCGCAAAAGGGCTGATCTTGAAGATGGAGGTAGTTTTGAAAACGTTAAAGAATTTTCCACTGAGAAAGGTCTCCAATTATTCACCTTCAAGCAGCTACACTCGGCAACTGGTGGTTTTAGCAAGTCAAATGTGGTTGGGCATGGTAGCTTTGGCCATGTATATAGAGGAGTCCTGAACGATGGAAGAAAGGTTGCGATTAAGCTTATGGATCAAGCGGGAAAGCAGGGAGAGGATGAATTTAAAGTGGAGGTGGAATTGTTAAGTCGGCTTCATTCCCCATATTTGTTGGCATTGCTCGGGTACTGCTCAGATAACAATCATAAATTGCTCGTATACGAGTTCATGGCCAATGGCGGTCTGCAAGAACATCTATACCCTGTTGGCAGTTCAAATTCCATCAGCGTTAAGTTGGACTGGGAAACACGACTGAGAGTTGCACTCGAAGCTGCCAAAGGTTTGGAGTATTTACATGAACATATATGCCCCCCAGTAATTCACAGGGATTTCAAGAGCAGCAATGTTCTGTTGGACAAAAATCTTCATGCTAAGGTTTCTGATTTTGGATTGGCAAAGATCGGCTCAGACAAAGCCGGGGGTCACGTCTCCACTCGAGTTTTGGGAACACAAGGATATGTTGCTCCTGAGTATGCGCTAACAGGGCATTTAACAACAAAATCAGATGTTTATAGTTATGGGGTTGTCCTCTTGGAGCTGCTCACAGGTAGAGTCCCAGTTGATATGAAGAAAACTCCTGGGGAAGCTTCTCTTGTTTCTTGGGCTTTGCCGAGGCTGACCGACAGGGAGAGAGTGATGCATATAATGGACCCTGCATTGGAGGGTCAGTACTCTATGAAAGATATTGTTCAAGTGGCAGCAATTGCAGCAATGTGTGTTCAACCGGAGGCAGATTACAGGCCGCTGATGGCCGATGTTGTCCAGTCATTAGTTCCACTCGTGAGAAATTATAGGACAACTTCAAAGATTATTGGTAGCAGTTCTAGTTCCAGCGCTACCAAGTCGCCTGCACCCCACGACAATGCTAGTTCGGGAGACTGA 1203 45.22 MEVEDDNRRKQQLVLLAIVVLASLALVSLLVAFSYYCYISNKVSKRLKIRKRADLEDGGSFENVKEFSTEKGLQLFTFKQLHSATGGFSKSNVVGHGSFGHVYRGVLNDGRKVAIKLMDQAGKQGEDEFKVEVELLSRLHSPYLLALLGYCSDNNHKLLVYEFMANGGLQEHLYPVGSSNSISVKLDWETRLRVALEAAKGLEYLHEHICPPVIHRDFKSSNVLLDKNLHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKKTPGEASLVSWALPRLTDRERVMHIMDPALEGQYSMKDIVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVRNYRTTSKIIGSSSSSSATKSPAPHDNASSGD* 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 13639375 13642722 + Chy12G214360.1 Chy12g00836 238617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00836 400 PANTHER OS07G0227300 PROTEIN 4 396 - -
Chy12g00836 400 SUPERFAMILY Protein kinase-like (PK-like) 63 364 IPR011009 -
Chy12g00836 400 MobiDBLite consensus disorder prediction 378 400 - -
Chy12g00836 400 CDD STKc_IRAK 94 367 - -
Chy12g00836 400 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Chy12g00836 400 Gene3D Transferase(Phosphotransferase) domain 1 164 384 - -
Chy12g00836 400 Pfam Protein tyrosine and serine/threonine kinase 91 364 IPR001245 GO:0004672|GO:0006468
Chy12g00836 400 ProSiteProfiles Protein kinase domain profile. 88 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g00836 400 PANTHER OS01G0750732 PROTEIN 4 396 - -
Chy12g00836 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Chy12g00836 400 Gene3D Phosphorylase Kinase; domain 1 52 163 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g01361 Chy-Chr4:20276931 Chy12g00836 Chy-Chr12:13639375 2.31E-93 dispersed
Chy07g00350 Chy-Chr7:2851269 Chy12g00836 Chy-Chr12:13639375 1.35E-93 dispersed
Chy08g00997 Chy-Chr8:17220308 Chy12g00836 Chy-Chr12:13639375 9.47E-145 dispersed
Chy12g00836 Chy-Chr12:13639375 Chy06g01805 Chy-Chr6:21715067 4.03E-110 dispersed
Chy12g00836 Chy-Chr12:13639375 Chy02g01226 Chy-Chr2:8870818 4.89E-103 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71613 PF07714 PK_Tyr_Ser-Thr 1.40E-44 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00836 - - csv:101204636 744.191