Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00839 ATGGCTGATAACTTTCGCCCTTTTCTCAAACAACTTGCAGCAGGACGATGGTTTTCAGTTTTTGCTTCCTTCTTAATCATGATCGGCGCCGGTTCCACATACGTTTTCGGTACATACTCGAAAGCAATCAAAACCCAATTCGATTACAGCCAAACCGAAATCAACACATTAGGATTCGCCAAAGATCTTGGTTCCAATCTCGGAGTTTTCGCTGGCCTTCTCGGCGAAATAGCTCCACCGTGGGTTCTGTTTGTCGTCGGTTCATTTCTCAATTTCTATAGCTATTTCATGATTTGGCTCTCCCTTACTCACCGTATCGCTAAACCACAGCTATGGCAAATGTTCATCTACATTTGCTTAGCTGCTAATTCACAAAACTTCGCTAACACAGCCGTTTTAGTAACGAGTGTAAGAAATTTCCCTGATCGACGAGGTATAATTCTTGGACTTCTTAAAGGATTCGTCGGAATTGGAGGTGCCATTGTAACTCAATTCTATTTAGCTCTTCATGGCCATGACAATCCAGCTAGTTTGGTGCTTCTTCTCGCATGGTTTCCCACTTTAATTTCTTCTTTATTTTTCCTTTCCATTCGAACAATCAATATTCGTAGACATCCCGAAGAACTCCGAGTTCTTTACCATTTGCTTTATGTCTCAATCATTCTTGCTTTGTTTCTCTTATTTCTTACCGTTTCACAAAAACAAGCTGCATTTTCTTCAGCTGGGTATGCTAGTGGAGCTGCTGTAATTATTGGGTTACTTCTTATGCCTCTATTAATCGCCGTTAGAGAAGAACTCATGCTCTTCAAGCTCAATGAACAAACAGACAAAAACTCATCTCCCCCTGTTTTCACTCCGGAAATGAAAACTTCATCTAACAATAAATCCTTATCCCCAATTGAAGAAATTCCCGAATTGAATTCACCAACATGTTTCTCAAACATATTCAACAAGCCAGAACGTGGTGAAGATTTCAGTATCTTACAAGCTCTGTTTAGTAAAGACATGGGGCTTATTTTCGTAGCAACACTTTGTGGGTGTGGTTCATCAATTGCTGCCATTGATAACATCGGCCAAATCGGCGAATCGCTTGGATATCCATCTAAATCCATAAGTATCTTTGTTTCCTGGGTTTCAATATTCAGCTTCTTCGGCAGAGTAGGCTCTGGTTTCATCTCGGAAACACTTATGACAAAGTACAAATTACCTCGTCCTTTAATGTTTGCTTTCTCCCATCTTCTCACTTGTATCGGTATGCTGTTCGTCGCCTTCCCGTATCCCGGCTCCATCTATGTAGCTTCGTTGACAATCGGGTTTGGATTCGGAGCGCAAGTACCGATAATTTTTGCAATACTTTCAGAGCTTTTTGGGTTGAAATACTATGCAACAATCTTCAATTGTGCTCAATTAGCAGTCCCAATCGGATCATATATACTAAATGTGGATGTCATTGGGAAATTGTATGATATTGAAGCAACAAAAGATGGTGGCAGTAGGGATGGGAATGGATTGACTTGCAAGGGAACTCATTGTTTTAGTGGATCATTCTTGGTTTTGGCTGTGGTGGTGTTGATTGGAGGTGTGGCCTCACTTGTGTTGGCATTTAGAACAAGAAATTTTTACAAAGGAGATATTTATAAGAAGTATAGAGAAGATATGTGGATTCCTCAATCAGATATGGAATTTTATTGTTTGGATGACAAGAAAAAGGTTGTTAACGATAATTTCCCAAGGATTGTTATGCCACCTAAGTATAGTTTTCTCAATGTAATATAG 1776 39.86 MADNFRPFLKQLAAGRWFSVFASFLIMIGAGSTYVFGTYSKAIKTQFDYSQTEINTLGFAKDLGSNLGVFAGLLGEIAPPWVLFVVGSFLNFYSYFMIWLSLTHRIAKPQLWQMFIYICLAANSQNFANTAVLVTSVRNFPDRRGIILGLLKGFVGIGGAIVTQFYLALHGHDNPASLVLLLAWFPTLISSLFFLSIRTINIRRHPEELRVLYHLLYVSIILALFLLFLTVSQKQAAFSSAGYASGAAVIIGLLLMPLLIAVREELMLFKLNEQTDKNSSPPVFTPEMKTSSNNKSLSPIEEIPELNSPTCFSNIFNKPERGEDFSILQALFSKDMGLIFVATLCGCGSSIAAIDNIGQIGESLGYPSKSISIFVSWVSIFSFFGRVGSGFISETLMTKYKLPRPLMFAFSHLLTCIGMLFVAFPYPGSIYVASLTIGFGFGAQVPIIFAILSELFGLKYYATIFNCAQLAVPIGSYILNVDVIGKLYDIEATKDGGSRDGNGLTCKGTHCFSGSFLVLAVVVLIGGVASLVLAFRTRNFYKGDIYKKYREDMWIPQSDMEFYCLDDKKKVVNDNFPRIVMPPKYSFLNVI* 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 13661042 13662817 + Chy12G214390.1 Chy12g00839 238620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00839 591 Pfam Nodulin-like 16 261 IPR010658 -
Chy12g00839 591 CDD MFS_Mch1p_like 15 526 - -
Chy12g00839 591 SUPERFAMILY MFS general substrate transporter 16 540 IPR036259 -
Chy12g00839 591 Gene3D MFS general substrate transporter like domains 11 210 IPR036259 -
Chy12g00839 591 Gene3D MFS general substrate transporter like domains 334 568 IPR036259 -
Chy12g00839 591 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 552 - -
Chy12g00839 591 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 6 552 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy12g00834 Chy-Chr12:13607372 Chy12g00839 Chy-Chr12:13661042 0 dispersed
Chy12g00839 Chy-Chr12:13661042 Chy12g00848 Chy-Chr12:13724354 0 dispersed
Chy12g00842 Chy-Chr12:13678276 Chy12g00839 Chy-Chr12:13661042 4.81E-70 dispersed
Chy12g00839 Chy-Chr12:13661042 Chy12g00840 Chy-Chr12:13670267 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00839 - - csv:101204389 1108.98