Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00847 ATGGCCGTGCCCACCACGTTACCCGTTGGCAATGGTGGAACCAGGAGTCTAGAGATCTCCAGTTTTGCTACACAAGTCGTACTCGGACGATGGTTTGCTCTTTTTGCTTCCTTCCTCGTAATGACTGGCGCCGGTGGCTTTTATTTGTTTGCTTATTTCTCTAAAGACATTAAAGAAACGCTCAAATGTGATCAAACTACACTCAACAAGATCGGTTTTTACAAAGACCTTGGATCCAACATCGGCATTATCTCTGGCTTTATGGCCGAGGTCGCTCCGCCTTGGTGCCTTCTCGTTCTTGCCTCTGCCGTTAACTTCATCGGCTACTTCAAGATATGGGAAGGCGTCGTCGGAAGAGTCGTGAAGCCGACCGTTGAGTACTTCTGCTTTTACATAACAGTTGGGGGAAACTCTCAAATCCTTGCCAATACAGTTGTGTTAGTGACTTGCGTGAAGAACTTCCCAGAAAGAAGAGGAGTAATCTTAGGACTTTTAAAAGGATTCTTGGGAATAGGTGGAGCTGTTCTAACCCAAATTCACTATGCAATTTATGGCCATGAATCCAAATCTATCATTCTCTTAATCGCTTGGTTCCCTTCTTTAATTACTCTTCTTTTTGCTTGCACAATCAGAGAAGTCAGGATAGTAAAACATCCAAATGAATTTAGAGTCTTCTTTCACTTTCTCTTTGTTTCTCTCATTCTTGCCTTCTTTCTCTTCATCTTAATCATCCTTCAAGGAAGAGTTCATTTCGATCAGTTAGCCCACACCTTCGTCGTCGTCGCAATCATGGGTTTGCTCTTAACTCCCCTCTTTATTGCCATTAGAGAAGAACTTGTTCAATGGAATCTTACCAAGATCACTCAGTTAGTTAAATCTCAAACGATCACTCAGAAACGCCTCACTTCAATTTCCCCTCCTACATCAAAAACCACTTCTTTTTTCGAAAACATTTTTGATAAACCCGAACGAGGAGAAGATTACACTTTTCTTCAAGCCATTTTGAGTATTGATATGTTCATTTTATATTTGACAATGATCATTGGGATTGGTTCAAGCTTTACAGCCATGGGTAACCTTGCCCAAATTGGTGAATCTCAACGCTACTCAACTGAATCCATTGATTTAATCCTTTCGATGGTTAGTATTTTCAACTTCTTGGGTCGAATCTTTTCCGGGTTCGCTTCGGAAATCTTGTTAGAGAAGTTCAAATTCCCTAGACCATTGATGCTAACTTTCACTCTTTTGATCTCTTGTATTGGACATATCTTAGTAGCATTTCCTTTCCATCATTCAGTCTACATTGCATCAATCATAATTGGGTTTTCCTTAGGTTCGCAAATCCCGTTGTATTTCGCCATGATTTCGGAGATTTTCGGTCTCAGACATTACTCTTTGTTGTATAATTTTGGGCAACTGTCTTGTCCGGTTGGGAGTTATATATTGAATGTGTTAGTGGCTGGAAGATTCTATGATGAAGAAGCTAAAATGATCAACGGTAATTCAATTGATACATGCAAAGGGGAACTGTGTTATAGAAATTCTTTTGCTATTTTGACTGGGATGTCATTGTTGGGAGCTGTGATTTCATTGATTTTGGTGAAGAGAACAAATGAGTTTTATAAAGGAGACATATACCAGAAATTTAGAGAAGATATGGATTCATTGAAAACTGAAGTCGAACTTTATAGAACTGATACTAAGAGTGAAATTGATAGTGTCAATGTTTGTAGACAAACTACTGATACCTCCTCTATGAGATGA 1764 39.46 MAVPTTLPVGNGGTRSLEISSFATQVVLGRWFALFASFLVMTGAGGFYLFAYFSKDIKETLKCDQTTLNKIGFYKDLGSNIGIISGFMAEVAPPWCLLVLASAVNFIGYFKIWEGVVGRVVKPTVEYFCFYITVGGNSQILANTVVLVTCVKNFPERRGVILGLLKGFLGIGGAVLTQIHYAIYGHESKSIILLIAWFPSLITLLFACTIREVRIVKHPNEFRVFFHFLFVSLILAFFLFILIILQGRVHFDQLAHTFVVVAIMGLLLTPLFIAIREELVQWNLTKITQLVKSQTITQKRLTSISPPTSKTTSFFENIFDKPERGEDYTFLQAILSIDMFILYLTMIIGIGSSFTAMGNLAQIGESQRYSTESIDLILSMVSIFNFLGRIFSGFASEILLEKFKFPRPLMLTFTLLISCIGHILVAFPFHHSVYIASIIIGFSLGSQIPLYFAMISEIFGLRHYSLLYNFGQLSCPVGSYILNVLVAGRFYDEEAKMINGNSIDTCKGELCYRNSFAILTGMSLLGAVISLILVKRTNEFYKGDIYQKFREDMDSLKTEVELYRTDTKSEIDSVNVCRQTTDTSSMR* 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 13712822 13714914 - Chy12G214470.1 Chy12g00847 238628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00847 587 SUPERFAMILY MFS general substrate transporter 32 273 IPR036259 -
Chy12g00847 587 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 14 557 - -
Chy12g00847 587 Coils Coil 546 566 - -
Chy12g00847 587 SUPERFAMILY MFS general substrate transporter 229 538 IPR036259 -
Chy12g00847 587 Pfam Major Facilitator Superfamily 334 536 IPR011701 GO:0022857|GO:0055085
Chy12g00847 587 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 557 - -
Chy12g00847 587 Gene3D MFS general substrate transporter like domains 337 565 IPR036259 -
Chy12g00847 587 Pfam Nodulin-like 30 275 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy12g00847 Chy-Chr12:13712822 Chy12g00832 Chy-Chr12:13533243 0 dispersed
Chy12g00847 Chy-Chr12:13712822 Chy12g00848 Chy-Chr12:13724354 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00847 - - csv:101203173 1060.06