Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00848 ATGATTGTAGCAGCAGGGCAGAGGTCCAATGGCGGAATTGGGAGCGGAGAATTGGGGGATTTTGTCAAGCAAATGGTGGCCGGACGGTGGTTTTCGCTTTTCGCTTCGTTCCTTGTAATGACCGGTGCGGGTGGAGTTTATTTGTTTGCTTATTACTCTAGAGACATCAAAACGACGCTCCGATGTGATCAAACGACATTGAACAAAGTTGGGTTTTATAAAGATTTGGGATCCAATGTCGGCGTTTTCGCCGGACTTCTGGGCGAGGTGGTGCCCACTTGGCTTCTTCTTCTCATCGGCGCCGCCTTCAATTTTATCGGTTACTTTAAGATTTGGCAAGCCGTTACCGGCAAAATTGTCCGCCCCACCGTCGCCTTCTTTTGCTTTTACATTATGATTGGAGCTAATTCTCAAAATTTTGCTAACACAGGAGTGCTAGTGACGTGCGTGAAAAACTTTCCAGAGAGAAGAGGAGTAATGCTGGGGCTTCTAAAGGGCTTCGTGGGTCTAAGTGGAGCCATAATGACCCAATTTTACATCGCCATTTACGGCCATGATACAAAATCTCTTGTTCTTCTACTAGCTTGGTTCCCTTCTTTAATCTCATTGATCTTCGTCTACACAATCCGAGAAATCAAATTCGTAAAACACCCAAATGAATTCAGAGTTTTCATTCAATTCCTTTGTGTCACCGTCCTCTTAACTCTCTTACTCACCGTCATAATCTTCATTCAAAAACGTGTCCATTTGGATCAATCCGCTCACATCGCCATTGTCACTGCAATCCTTGCTCTCCTCTTTGTTCCATTGTTAATCGCCATTAGAGAAGAAGTCGTGCTCTGGAATCATAACAAACGGACCCCAATTTCAAACCCTTTTACCAGAATCAAAATCGAAACCTCACAAACAAACCCCCCAATTGATTCTCCCTCAACCTCACAACATCCGCATCCACATCCACCTCAAACCCAACCCACATCATGTTTCTCCAACATTTTCAACAAGCCCGAACGAGGCGAGGATTACACTGTTCTTCAAGCCATTTTCAGTATCGATATGCTTATTATATGCTTCACTATGATGATCGGCGTCGGTGGGAGTTTAACCGCCATTGATAATCTAGGTCAAATCGGTGAAGCACAAGCCTACTCGTCTGAAACAATCAACTTATTCGTTTCATTAATGAGTATTTTCAATTTCGCTGGTAGAATCTTTTCTGGGTTTGTCTCCGAAATCTTGCTTGAGAAATTCCAATTCCCTCGTCCATTGATGCTCACATTGATTCTCCTGATTTCCTGTCTTGGACATCTTTTAGTAGCTTTCCCATTTGATGATTCACTTTACGTTGCATCAATCATAATAGGATTCTCAATGGGTTCACAAGTCCCATTACATTTCGCTATGATTTCAGAGATTTTTGGTCTTAAACATTACTCAACATTGTTTAATTTTGGGCAACTCTCTTGTCCAATTGGGTCTTATATTCTGAATGTTTTGGTGACTGGGAAGTTGTATGATGAAGTAGCACGAATTGGGAGTAATCCAAACAGGTTACATTGTGTAGGGACCCATTGTTATGAACGATCGTTCTTGATTTTGGCTGGATTAACGTTTATGGTAGCGATGGTATCATTGATTTTGGTGAAAAGGACCAGGGAATTTTATAGAGGGGATATATACAAGAAATTCAGGGAAGATATGGAAACTTTGAAGACAGAAGTGGAGTTTTATAGAGTGGACGAGAAGAAAACTAGGATTGGGAATTTACTTGTTGATAAACATTCTATTCATTTCAAGAAATGA 1803 41.54 MIVAAGQRSNGGIGSGELGDFVKQMVAGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTLRCDQTTLNKVGFYKDLGSNVGVFAGLLGEVVPTWLLLLIGAAFNFIGYFKIWQAVTGKIVRPTVAFFCFYIMIGANSQNFANTGVLVTCVKNFPERRGVMLGLLKGFVGLSGAIMTQFYIAIYGHDTKSLVLLLAWFPSLISLIFVYTIREIKFVKHPNEFRVFIQFLCVTVLLTLLLTVIIFIQKRVHLDQSAHIAIVTAILALLFVPLLIAIREEVVLWNHNKRTPISNPFTRIKIETSQTNPPIDSPSTSQHPHPHPPQTQPTSCFSNIFNKPERGEDYTVLQAIFSIDMLIICFTMMIGVGGSLTAIDNLGQIGEAQAYSSETINLFVSLMSIFNFAGRIFSGFVSEILLEKFQFPRPLMLTLILLISCLGHLLVAFPFDDSLYVASIIIGFSMGSQVPLHFAMISEIFGLKHYSTLFNFGQLSCPIGSYILNVLVTGKLYDEVARIGSNPNRLHCVGTHCYERSFLILAGLTFMVAMVSLILVKRTREFYRGDIYKKFREDMETLKTEVEFYRVDEKKTRIGNLLVDKHSIHFKK* 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 13724354 13726238 + Chy12G214480.1 Chy12g00848 238629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00848 600 SUPERFAMILY MFS general substrate transporter 36 270 IPR036259 -
Chy12g00848 600 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 15 571 - -
Chy12g00848 600 Coils Coil 560 580 - -
Chy12g00848 600 MobiDBLite consensus disorder prediction 301 327 - -
Chy12g00848 600 CDD MFS_Mch1p_like 28 541 - -
Chy12g00848 600 SUPERFAMILY MFS general substrate transporter 256 553 IPR036259 -
Chy12g00848 600 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 15 571 - -
Chy12g00848 600 Pfam Nodulin-like 29 274 IPR010658 -
Chy12g00848 600 Gene3D MFS general substrate transporter like domains 344 556 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy12g00832 Chy-Chr12:13533243 Chy12g00848 Chy-Chr12:13724354 0 dispersed
Chy12g00839 Chy-Chr12:13661042 Chy12g00848 Chy-Chr12:13724354 0 dispersed
Chy12g00847 Chy-Chr12:13712822 Chy12g00848 Chy-Chr12:13724354 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00848 - - csv:101202941 1105.51