Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00872 ATGGCGGGGGCAGCCAGTGGCAAGTCGCTGGAGCAAACACCGACATGGGCCGTTGCCGTTGTTTGCTTTGTTTTGCTCGTCATCTCTATTTTCATCGAATATAGTCTCCATCTTATCGGACATTGGCTAAAGAAGAGACACAAACGGGCGTTGTTTGAAGCATTAGAGAAGATCAAATCAGAGCTTATGTTATTGGGATTTATATCATTGCTACTAACGGTGGGGCAAGGACCAATAACGGAGATATGCATTCCACAACATGTAGCTGCAACGTGGCATCCATGTACAAAGGAAAGAGAACATGAGATGAACAAAAAGATGGAGAAATCTGTGGAACATTTGGGTCTTAATCGCCGGAGACTCCTTCATCTCCTCGGAAATGGTGGAAGTTTCCGGCGGAGTTTGGCCGCTGCGGGAGGAGAGGATAAATGTGCTGCCAAGGGTAAAGCTTCATTTATTTCAGCAGATGGAATTCATCAACTTCATATCTTCATTTTTGTGTTGGCTGTTTTTCATGTTTTGTATTGCGTTCTAACTTATGCTTTGGCTAGAGCTAAGATGAGGAGTTGGAAAACATGGGAAAAAGAGACCAAAACTGCTGAATACCAATTCTCACATGATCCAGAGAGGTTTAGGTTTGCAAGAGACACCTCATTTGGGAGAAGACATTTGAGCTTTTGGACCAAAAATCCTGCCTTGATGTGGATCGTTTGTTTCTTCAGACAATTTGTAAGATCTGTTCCAAAAGTTGATTACTTGACATTACGACATGGGTTTATAATGGCACATTTAGCCCCTCAAAGTCATACACAATTTGATTTTCAAAAATACATTAATAGATCCCTTGAAGAAGACTTCAAAGTTGTTGTGGGAATCAGCCCACCAATTTGGTTCTTTGCTGTTCTATTTCTCCTCTCAAACACTCACGGTTGGAGGGCATATCTATGGCTGCCATTCATCCCACTAATCATTTTGCTGTTGATTGGAACAAAATTGCAAGTGATCATAACGAAAATGGCACTAAGAATACAAGAAAGAGGTGAAGTAGTGAAGGGCGTGCCGGTGGTGGAGCCTGGCGATGACCTCTTTTGGTTTAATCGACCTCGCCTTATTCTTTATCTCATTAACTTCGTTCTCTTTCAAAATGCCTTCCAAGTTGCTTTTTTTGCTTGGACTTGGTATGAGTTTGGGTTGAATTCTTGCTTCCATGAGCATATAGAAGATGTGGTGATCAGAATTTCTATGGGGGTGCTTGTACAAATCCTTTGCAGTTATGTTACTCTTCCTCTTTATGCACTAGTCACTCAGGTAAAACCAAAATACTCTTCTATGAATACTTAA 1341 41.39 MAGAASGKSLEQTPTWAVAVVCFVLLVISIFIEYSLHLIGHWLKKRHKRALFEALEKIKSELMLLGFISLLLTVGQGPITEICIPQHVAATWHPCTKEREHEMNKKMEKSVEHLGLNRRRLLHLLGNGGSFRRSLAAAGGEDKCAAKGKASFISADGIHQLHIFIFVLAVFHVLYCVLTYALARAKMRSWKTWEKETKTAEYQFSHDPERFRFARDTSFGRRHLSFWTKNPALMWIVCFFRQFVRSVPKVDYLTLRHGFIMAHLAPQSHTQFDFQKYINRSLEEDFKVVVGISPPIWFFAVLFLLSNTHGWRAYLWLPFIPLIILLLIGTKLQVIITKMALRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQVAFFAWTWYEFGLNSCFHEHIEDVVIRISMGVLVQILCSYVTLPLYALVTQVKPKYSSMNT* 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 14022949 14028887 + Chy12G214720.1 Chy12g00872 238653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00872 446 PANTHER MLO-LIKE PROTEIN 1 1 438 IPR004326 GO:0006952|GO:0016021
Chy12g00872 446 Pfam Mlo family 8 437 IPR004326 GO:0006952|GO:0016021
Chy12g00872 446 PANTHER MLO-LIKE PROTEIN 1 438 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy11g01330 Chy12g00872 CCT
Chy11g01330 Chy12g00872 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01330 Chy-Chr11:19515892 Chy12g00872 Chy-Chr12:14022949 0 dispersed
Chy12g00872 Chy-Chr12:14022949 Chy11g01967 Chy-Chr11:25656582 4.11E-120 dispersed
Chy12g00869 Chy-Chr12:13956066 Chy12g00872 Chy-Chr12:14022949 5.46E-166 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00872 K08472 - csv:101217225 850.892