Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00902 ATGCCTGTCCCTTTTTCTCTTCTCTGTTTTCTCACTCTGCTTCTCATTTCCTACGCACCATCAAAATGTGCCAATGCAAAACCACCACCACCTAAACAACCCCCCGCCCGCCGCCACCGCCTCCTCTCAGTCGACTACTATAACAAAACATGCCCTCACCTCGACCAGCTTGTCTCCTCAATCACTACCCAACAGTTCAAAGACGCACCAGTCTCAGCTCCAGCAACACTCCGCCTCTTCTTCCATGATTGCTTTGTAGAAGGTTGTGATGGGTCGATTCTGATATCAACAAAGCCAGGCAGCAAAGTGGCGGCGGAAAAGGATGCAGTGGACAATAAAGGGCTGAGACCTGAGGCGTTTGAAAGCATCAAGAAAGCCAAGGCGTTGGTTGAGAGCAAATGCCCTGGTGTTGTGTCTTGTGCTGACATCCTAGCAATTGCAGCCAGAGATTTTGTCCATTTGGCAGGAGGGCCGTATTACCCGGTGAAGAAGGGACGATGGGACGGGAAGATCTCCATGGCGTCCAGAATAGGTTCCAATCTACCACGAGCAAATTCCACCGTCGATCAACTTCTCAAACTCTTCAATTCCAAAGGTCTATCGGCCGATGATCTTGTCGTCCTCTCCGGTGCGCATACGATCGGATTTGCACACTGCGAGCACTTCACAAACCGTCTCTACGACTACAGAGGCACGAAGCAACCGGATCCAGCGATCGACGGGAGACTGCTGAAGGAGCTGAAAATGTCGTGCCCCAGGTACGGGGGAAATACAGATATAGTGGCGCCATTCGATGTAACGACGCCGTTTGTGTTTGATCATGCGTACTACGGAAATTTGGAAGGGAAATTGGGATTGTTAGCTACGGATCAAGCTCTGGTTTCGGATGCGAGGATGAAGACGATGGTGCAGAGTTTGGCGAAGGATAAGCAGAAGTTTTTTCAAGCTTTTGCGGCGGCGATGGACAAAATGGGATCGATTGGTGTGAAGAGAGGACGAAGACATGGAGAACGAAGGACGGATTGTAGCATTCATCAGAGTTGA 1044 50.38 MPVPFSLLCFLTLLLISYAPSKCANAKPPPPKQPPARRHRLLSVDYYNKTCPHLDQLVSSITTQQFKDAPVSAPATLRLFFHDCFVEGCDGSILISTKPGSKVAAEKDAVDNKGLRPEAFESIKKAKALVESKCPGVVSCADILAIAARDFVHLAGGPYYPVKKGRWDGKISMASRIGSNLPRANSTVDQLLKLFNSKGLSADDLVVLSGAHTIGFAHCEHFTNRLYDYRGTKQPDPAIDGRLLKELKMSCPRYGGNTDIVAPFDVTTPFVFDHAYYGNLEGKLGLLATDQALVSDARMKTMVQSLAKDKQKFFQAFAAAMDKMGSIGVKRGRRHGERRTDCSIHQS* 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 14426837 14429586 + Chy12G215020.1 Chy12g00902 238683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00902 347 Gene3D Peroxidase, domain 2 182 324 - -
Chy12g00902 347 PANTHER PEROXIDASE 25-RELATED 31 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g00902 347 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Chy12g00902 347 PANTHER PEROXIDASE 19 31 342 - -
Chy12g00902 347 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
Chy12g00902 347 CDD secretory_peroxidase 42 343 IPR033905 GO:0004601|GO:0042744
Chy12g00902 347 ProSiteProfiles Plant heme peroxidase family profile. 41 346 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g00902 347 SUPERFAMILY Heme-dependent peroxidases 42 344 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy12g00902 347 Pfam Peroxidase 62 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g00902 347 PRINTS Plant peroxidase signature 137 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g00902 347 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g00902 347 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g00902 347 PRINTS Plant peroxidase signature 263 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g00902 347 PRINTS Plant peroxidase signature 156 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g00902 347 PRINTS Plant peroxidase signature 279 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g00902 347 PRINTS Plant peroxidase signature 118 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g00902 347 PRINTS Plant peroxidase signature 319 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g00902 347 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy12g00902 347 Gene3D - 45 344 - -
Chy12g00902 347 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g00902 347 PRINTS Haem peroxidase superfamily signature 156 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g00902 347 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g00902 347 PRINTS Haem peroxidase superfamily signature 138 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy12g00902 347 PRINTS Haem peroxidase superfamily signature 265 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy12g00902 Chy-Chr12:14426837 Chy04g01488 Chy-Chr4:21546024 2.84E-85 dispersed
Chy12g00902 Chy-Chr12:14426837 Chy12g01291 Chy-Chr12:17389527 5.56E-90 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00902 K00430 - csv:101216263 648.662