Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00930 ATGGCCTCATTCAAACTCCAATTCCTCCTTCTCTCTTTCCCCCTTCTTCTCTTCTCTTCCATTTCCTCCCTTGATTTCCTCTTCAATGGATTCAATTCAACCAACATCTCCCTCTACGGCAACGCCACCATCGATTCCTCTTTCATCGCTCTCACCAACCAAACCGGTTTCTCCATCGGCCGTGCTCTCTTCCCTTCCAAAATTCCCACTAAATCCCCCAATTCCTCTTCCATCCTCCCTTTCTCCACTTCCTTCATCTTCGCTATGGCTCCTTACAGGGACGTCCTTCCTGGGCACGGCTTAGTTTTCATTTGCGTTCCGACTACTGGAATCGACGGAACTTCTGCTGCTCAGAATTTGGGGTTTCTTAACTTCACCCTTAATGGAAACCCCAATAACCATGTCTTTGGTGTTGAGTTCGATGTTTTTGAGAATGAGGAATTCAGCGATCCCGATGATAATCATGTCGGAATCAATTTGAATTCCTTGACGTCTTTTGTCACCGAAGAAGCTGGGTTTTGGTCTGACGGTGGTTCGAGTGCGGCGGGTACGCTCAACAGAGTCAGGCTTAATAGCGGCGAAAATTATCAGGTTTGGATTGACTATTCCGATTTCAGGATGAATGTTACGATGGCTCCTGCGGGGATGGAGAAGCCGCGGAGGCCGCTGATTAATACGTCTCTCAATCTCTCTGGAATTTTCATGGATGAAATGTATATGGGGTTCACGAGTTCAACAGGACAGTTGGTTCAAGGTCATAACATTTTAGCTTGGAGTTTCAGTAACACTAATTTTTCATTGAGTGAGAGTTTGATCACCACTGGATTACCCTCCTTCCTCCTCCCAAAAGACCCAATTACCAAATCGAAGTGGTTCATCGCCGGAGTGACAACCGGCGGATTCCTCGTCGTTTGTTTCTTTGCTACGATTTTAGGGATTTTGATCGCCGACCAACGGAGAAAAGCGAGGTTAAGAGCCGAAATGGAAGATTGGGAATTAGAGTATTGGCCACACCGACTGACATATCAAGAAATCGAATCGGCAACGAAAGGATTTGCAGAAGAAAACGTGATAGGAATCGGAGGGAATGGGAAAGTACATAAAGGGATTTTGGCCGGAGGAAGTTCAGAAGTTGCCGTGAAACGAATCTCTCACGATAACGACGGGATGCGTGAATTCTTAGCTGAAATCTCAAGTATCGGAAGATTAAAACACAGAAATCTTGTAAGTTTGAAGGGTTGGTGTAAAAAAGAGAAGGGAAATTTCTTACTGGTTTACGATTTCATGGAAAATGGAAGCTTAGACAAATGGGTATTTGATTGTGATGAGAGAAACATGTTGAGTTGCGAGGATCGAATCAGAGTATTGAAGAACGTAGCCACAGGGGTTTTGTATTTACACGAAGGATGGGAATCAAAGGTTCTTCACAGAGACATAAAAGCCAGCAATGTGTTGTTAGACAAAGACATGAATGGAAGGCTAGGAGATTTCGGGTTAGCTCGAGTCCACGGTCACGGTCAAGTTGCAAGCACGACTCGAATCGTTGGCACAATGGGTTACATAGCACCCGAGTTGATTCGAACGGGACGAGCCTCAACTCAATCCGACGTGTTTGGTTTTGGGGTATTGATTTTGGAAGTGATGTGTGGGAGGAGGCCAATAGAGGAAGGGAAGCCGCCATTGGTGGATTGGGTTCGCCAGTTGGCCATTGAAGGGAAAATTACGGCAACGCTTGACGACCGGCTGAGGAAGAAGGGTGGGTGGAACGAGGAGGAAGTGGAGAGAGTATTACATTTGGGACTGGAGTGTGCGTATGTTGACCCAAACAATCGGCCGACGATGAGGCAAATTGTGAAAATTTTGGAAGGGAAGATTGAGTTGGATGAGAGTGAGAGTGAGAGTATGAATGCTTATTTGCTTCAAAGATTGAAGTCAGAAGGAATGTTGTGTGATTCTGGTGTTGGTTTTGGGAAAAAACTGCATCCAACATTTGAGGACTTTCTTCAATCTTATTCAACTTCACTCTCTTGGACCAATTCTTCTGTCACTGGCAGGTGA 2058 45.43 MASFKLQFLLLSFPLLLFSSISSLDFLFNGFNSTNISLYGNATIDSSFIALTNQTGFSIGRALFPSKIPTKSPNSSSILPFSTSFIFAMAPYRDVLPGHGLVFICVPTTGIDGTSAAQNLGFLNFTLNGNPNNHVFGVEFDVFENEEFSDPDDNHVGINLNSLTSFVTEEAGFWSDGGSSAAGTLNRVRLNSGENYQVWIDYSDFRMNVTMAPAGMEKPRRPLINTSLNLSGIFMDEMYMGFTSSTGQLVQGHNILAWSFSNTNFSLSESLITTGLPSFLLPKDPITKSKWFIAGVTTGGFLVVCFFATILGILIADQRRKARLRAEMEDWELEYWPHRLTYQEIESATKGFAEENVIGIGGNGKVHKGILAGGSSEVAVKRISHDNDGMREFLAEISSIGRLKHRNLVSLKGWCKKEKGNFLLVYDFMENGSLDKWVFDCDERNMLSCEDRIRVLKNVATGVLYLHEGWESKVLHRDIKASNVLLDKDMNGRLGDFGLARVHGHGQVASTTRIVGTMGYIAPELIRTGRASTQSDVFGFGVLILEVMCGRRPIEEGKPPLVDWVRQLAIEGKITATLDDRLRKKGGWNEEEVERVLHLGLECAYVDPNNRPTMRQIVKILEGKIELDESESESMNAYLLQRLKSEGMLCDSGVGFGKKLHPTFEDFLQSYSTSLSWTNSSVTGR* 686
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 14686138 14688195 - Chy12G215300.1 Chy12g00930 238711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00930 685 Gene3D Phosphorylase Kinase; domain 1 315 428 - -
Chy12g00930 685 Pfam Legume lectin domain 24 265 IPR001220 GO:0030246
Chy12g00930 685 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Chy12g00930 685 Gene3D Transferase(Phosphotransferase) domain 1 429 644 - -
Chy12g00930 685 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 7 677 - -
Chy12g00930 685 ProSiteProfiles Protein kinase domain profile. 352 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g00930 685 SUPERFAMILY Protein kinase-like (PK-like) 330 622 IPR011009 -
Chy12g00930 685 Pfam Protein kinase domain 353 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g00930 685 Coils Coil 314 334 - -
Chy12g00930 685 CDD STKc_IRAK 358 623 - -
Chy12g00930 685 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 268 IPR013320 -
Chy12g00930 685 CDD lectin_legume_LecRK_Arcelin_ConA 26 263 IPR001220 GO:0030246
Chy12g00930 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Chy12g00930 685 SMART serkin_6 352 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g00930 685 Gene3D - 21 270 - -
Chy12g00930 685 PANTHER - 7 677 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy09g00075 Chy-Chr9:676279 Chy12g00930 Chy-Chr12:14686138 1.30E-136 dispersed
Chy12g00930 Chy-Chr12:14686138 Chy06g01890 Chy-Chr6:22748430 3.18E-109 dispersed
Chy01g00340 Chy-Chr1:2481488 Chy12g00930 Chy-Chr12:14686138 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71619 PF00069 Pkinase 7.00E-47 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00930 - - csv:101222577 1296.57