Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00986 ATGAATTCCGCCTTTCCTCTTCTTCTTCTGCTTCTTCTTCTTCTCCTTTCATTAGTTACGACATTCTTCTCTTCAAAGTTCTGCGCCTATGGCAGTACTGATACAATCACATCAACAGATTTCATCAAACACCCTTCAACCATAATTTCCAATGCCGATTCCTTCAAATTGGGCTGGTTCTCACCTCTTAATTCCACAGCACAATACGTCGGAATTTGGTACCATCAAATTTCCATACAAACTCTAGTATGGGTTGCTAATAAAGACACCCCTCTCAACAATACTTCCGGAATTTTCACTATCTCCAACGATGGAAATCTTGTGGTCTTAGACGAATACAACACCACCATTTGGTCTTCAAATATTACTTCACCCACAGCCAATACAACCGCTCGGATTCTGGATTCAGGCAACCTTGTCTTGGAAGATCCTGTTTCAGGGGTTTTTATTTGGGAGAGCTTCGAACACCCTTCCAATTTACTCTTGCCTTCCATGAAACTTGTCACAAACAAGAGAACTCAACAGAAGCTCCAATATACCTCATGGAAAACCCCTTCTGATCCATCTAAAGGTAACTTTTCTTTAGCGTTGGATGTTATTAATATTCCTGAAGCTGTTGTTTGGAATAATAATGGAGGTATCCCATATTGGAGATCTGGTCCATGGAATGGTCAGTCTTTTATCGGCTTCCCCAATATGATATCTGTTTATCACATTGGATTTAATCTTTTGATTGAAGATCAAACGTATTCTTTCTCAATTTTTTACAATAGCGACTTACTTTACAACATGGTATTAAGTCCGGAAGGGATTTTGGAGCAACAGTTCTGGAATCAATCGAATGGAAATTGGGAACTGAGTTGGTCGGCTTTTAGCACAGAATGTGATTATTACGGTGTTTGTGGGGCGTTTGGGGTATGTAATGCAAAAGCAACCCCTGTTTGCAGCTGTTTAACTGGGTTTAAACCGAAGGATGAAGATGAATGGAAACGAGGAAATTGGAGTAATGGGTGTGAGAGAATTACGCCATTGCAATGTGAGAGCAGCGCTAGAAACAACAGTAGAGTTGAGGAAGATGGATTTCTGAAATTGGAAACGGTTAAAGTTCCATTTTTGGTAGAGTGGTCGAATTCGTCTAGTTCAGAGAGTGATTGCAAACAAGAGTGCTTTGAGAATTGCTTGTGTAGTGCTTATGCATATGAAAATGGCATTGGTTGTATGCTATGGAAAAAAGAGTTAATTGATGTACAGAAATTTGAAAGCCTTGGAGCCAATCTTTATCTTCGACTGGCCAATGCAGACTTGCTCAAAATTAATGATGTAAAAAGATCAGAGAGTAAAGGAACTGTTATAGCAATAGTGCTACCAACGACACTAGTGATCTTCATCATTATTGCCATTTACTTCTGTTGGAGATGGAAGGCTAACAAAAATGTAGAATATATAAAAAACGGGAAGAGATTGAAGTTGAGAAAGGACGACGTGATTGGGGACGAAAGTGAATTCAAAGAACTACCTCTTTATGATTTTGAGAAGCTGGCAATCGCAACAGACAGTTTTGATTTAAGTAAGAAACTTGGACAAGGTGGTTTTGGTCCTGTATATAAGGGAACATTGTTAGATGGACAAGAAATAGCAATAAAGAGGCTTTCAAGAGCTTCTAATCAAGGGTACGAGGAATTTATAAACGAAGTCATTGTGATTTCGAAACTACAACATAGAAATCTTGTACAGCTTCTCGGTTGTTGCATTGAAGGAGAAGAGAAGATGCTAATCTACGAGTACATGCCCAACTCAAGTTTGGATGCTTTTATCTTTGGTTCTGCTAAACAAAAACTCTTGGATTGGAGAAGAAGATTTCACATCATCAATGGAATTGCTCGAGGTCTCCTTTACCTTCATCGAGATTCAAGATTGAGAATTATTCATAGGGACTTGAAGGCAAGTAATATTTTATTAGACAAAGATATGAATCCTAAAATTTCAGACTTTGGTATGGCAAGAATTTTTGGCAGCAATGAAGTGGAAGCCAATACTATAAGAGTGGTTGGAACTTATGGATATATGTCGCCTGAGTATGCAATGCAAGGTCAATTTTCGGAGAAATCGGACGTTTTTAGCTTTGGAGTTTTATTACTTGAAATTATAAGTGGAAAAAGGAACACAGGCTTCAACCACCATGAAAATGCTTTAAGCTTATTGGAATTCGCTTGGAAGTTGTGGATAGAAAACAATCTTATCGTTTTAATTGATCCAACAATATATGAATTGAGTAATCACTTGGAGATTTTGAGGTGCATCCAAGTGGGACTTTTATGTGTTGAAGAATCTATAAACGATCGACCAAATATCCTTACCATTCTTTCGATGCTCAATAGTGAAATTGTGGATCTTCCTCTTCCAAAGCAGCCTAGCTTTATTGCTAGAGCAGATCATCAGAGTGATTCAAGGATATCTCAACAATGTATGTCTAACATGAATAAAACAAGACATGAAATTTCTCTTCTTCTCCTTCTTCTTTCATTGACATGTTTCTCTTCAAGAATTTGCTATGGCGGAGATACAATTACATCAACAAATTTCATCAAAGACCCTGCAACTATTATATCCAATACCAGTGTCTTCAAATTGGGGTTCTTCACACCTTCAAATTCTACCCATCGATACGTTGGAATTTGGTTTGAGAAGATTTCTCCACAAACTGTTATGTGGGTTGCAAACAGAGATACCCCTCTGAATAATACTTCTGGGATTTTCACTATTTCTAACGATGGAAATCTTGTGGTTTTAGATTCAACCAATACCATCCTTTGGTCTTCAAATATTTCTTCTTCTTCTTCAGCAGCCAACAACACAATCGCTCAAATTTTAGATACAGGAAACCTGATTTTGAAAGATACTTCTTCAGGGGTGATTAAATGGGAGAGTTTCGAACACCCAACTGATAAATTCTTGCCTTCCATGAAGCTTATGACCAACAAAAGAACAAATGAGCACGTGGGTTTTACCTCGTGGAACTCCCCTTCCGATCCATCTACAGGTAATTTCTCATTTTTGTTGGATGTTCGTAATATTCCTGAAGCTGTGATTTTGAATGGTGGTAAAACTTATTGGCGATCTGGTCCATGGAATGGTCAGTCCTTTATTGGAATACCTGAAATGTATTCTGTTTATCTTGTTGGGAATAACATTGCAATCCAAGATCAAACTTACACCTTTTCTCTTGCTTCAAATATTGGAAAACAAATCTTTTATTTGTTCATAAGCTCACAAGGGAATGTTGAGCAAAGGAATTGGGATGACGAGAAGAAGCAATGGAATACTAGTTGGGTTTCTCCAAAAACAGAGTGTGATTTCTATGGAACGTGTGGGACCTTTGGAATTTGTAATGCAAAAACATCCCCTGTTTGTAGCTGTTTAACAGGGTTTAAGCCAAAGCAGGAAAAGGAATGGAATCAAGGAAATTGGAGCAGTGGGTGTGTGAGAAAGACGACATTAAAATGTGAGAAACAGTTAAACAACAACACTGATGCTAAAGAAGATGAGTTTTTAAAATTGGGAATGGTTAAAGTTCCATTCTTTGCAGATTGGTCTATGGCCCCTCCTTCAATTGATGATTGTAGGCGCGAGTGCTTGAGAAATTGCTCGTGTAGTTCATATGCATTTGAAAATGGCATTTGTATGAATTGGATGAATGACTTGATTGATACACAACAGTTTGAGAGCGTTGGAGCTGATCTTTACCTTCGAATCGCATCCGCCGATTTACCAACAAATAGCGGAAGAAACAATAAGAGAATTATTATAGCTATAGTGATACCAGTAACGTTTGTCATCTTCATCATTGCCATATTCTTATGCTGGAAACGGAAGATTAACAAACACGAGAAGAAGCTGAATATGACATCTAGTGTGAAAAAGAAGATTTTGAAACAATCAATAGTAGATGATGATATGATTGAGGGTGAAATCAAACTTGAGGAACTACCACTTTATGATTTTGAGAAGGTAGCAATTGCAACAAATTACTTTGATTTGAACAGCAAGCTTGGGCAGGGTGGCTTTGGTCCAGTGTATAAGGGGAAATTATTAAATGGACAGGAAATAGCAGTAAAGAGGCTTTCAAGAGCTTCTAAACAAGGGTATGAAGAATTTATCAATGAAGTGAGAGTGATTTCAAAGCTACAACACAGGAATCTTGTAAGACTTTTGGGTTGCTGCATTGAAGGAGAAGAGAAGATGTTAATATATGAGTATATGCCCAACCTAAGTTTGGATGCATGGATCTTTGGCTCTTCCAAACCTAAAATTCTGGATTGGAGAAAAAGGTTTAATATTATTGATGGAATTGCTCGTGGTCTTCTTTACCTTCATAGAGATTCAAGATTGAAAATTATTCATAGAGATCTTAAGGTAAGTAATATTTTGTTAGATAAAGATTTGAACTCTAAAATTTCGGATTTTGGCATGGCAAGAATATTTGGTGGCGATGAAGTTCAAGCAAACACTGTGAGAGTTGTTGGAACTTATGGATATATGTCTCCCGAATACGCAATGCAAGGTCAATTTTCAGAGAAATCAGATGTGTTTAGCTTTGGAGTTTTGTTACTTGAAATTATTAGCGGGAGAAGAAATACAGGATTCTACGTCCATGAATCTAGCATAAGCTTACTGGGATTTGCATGGAAATTGTGGACAGAAGACAATCTTATTCCTTTGATCGAACCAACGATATATGAACCGTGCTATCAATTAGAGATTTCGAGATGCATTCATGTGGGGCTGTTATGTGTTCAAGAATTTATAAATGAAAGGCCAAACGTTTCCACTATCATTTCAATGCTTAATAGTGAGATTGTTGATCTTCCTTCTCCAAAGGAACCTGGCTTTGTTGGTAGACCACATGAAACTAACACAGAATCTTCTAAAAAAAAAGTAGATCAATTTTCTACAAATAATGTTACACTTACAGCAGTTATAGCACGATAA 4989 37.38 MNSAFPLLLLLLLLLLSLVTTFFSSKFCAYGSTDTITSTDFIKHPSTIISNADSFKLGWFSPLNSTAQYVGIWYHQISIQTLVWVANKDTPLNNTSGIFTISNDGNLVVLDEYNTTIWSSNITSPTANTTARILDSGNLVLEDPVSGVFIWESFEHPSNLLLPSMKLVTNKRTQQKLQYTSWKTPSDPSKGNFSLALDVINIPEAVVWNNNGGIPYWRSGPWNGQSFIGFPNMISVYHIGFNLLIEDQTYSFSIFYNSDLLYNMVLSPEGILEQQFWNQSNGNWELSWSAFSTECDYYGVCGAFGVCNAKATPVCSCLTGFKPKDEDEWKRGNWSNGCERITPLQCESSARNNSRVEEDGFLKLETVKVPFLVEWSNSSSSESDCKQECFENCLCSAYAYENGIGCMLWKKELIDVQKFESLGANLYLRLANADLLKINDVKRSESKGTVIAIVLPTTLVIFIIIAIYFCWRWKANKNVEYIKNGKRLKLRKDDVIGDESEFKELPLYDFEKLAIATDSFDLSKKLGQGGFGPVYKGTLLDGQEIAIKRLSRASNQGYEEFINEVIVISKLQHRNLVQLLGCCIEGEEKMLIYEYMPNSSLDAFIFGSAKQKLLDWRRRFHIINGIARGLLYLHRDSRLRIIHRDLKASNILLDKDMNPKISDFGMARIFGSNEVEANTIRVVGTYGYMSPEYAMQGQFSEKSDVFSFGVLLLEIISGKRNTGFNHHENALSLLEFAWKLWIENNLIVLIDPTIYELSNHLEILRCIQVGLLCVEESINDRPNILTILSMLNSEIVDLPLPKQPSFIARADHQSDSRISQQCMSNMNKTRHEISLLLLLLSLTCFSSRICYGGDTITSTNFIKDPATIISNTSVFKLGFFTPSNSTHRYVGIWFEKISPQTVMWVANRDTPLNNTSGIFTISNDGNLVVLDSTNTILWSSNISSSSSAANNTIAQILDTGNLILKDTSSGVIKWESFEHPTDKFLPSMKLMTNKRTNEHVGFTSWNSPSDPSTGNFSFLLDVRNIPEAVILNGGKTYWRSGPWNGQSFIGIPEMYSVYLVGNNIAIQDQTYTFSLASNIGKQIFYLFISSQGNVEQRNWDDEKKQWNTSWVSPKTECDFYGTCGTFGICNAKTSPVCSCLTGFKPKQEKEWNQGNWSSGCVRKTTLKCEKQLNNNTDAKEDEFLKLGMVKVPFFADWSMAPPSIDDCRRECLRNCSCSSYAFENGICMNWMNDLIDTQQFESVGADLYLRIASADLPTNSGRNNKRIIIAIVIPVTFVIFIIAIFLCWKRKINKHEKKLNMTSSVKKKILKQSIVDDDMIEGEIKLEELPLYDFEKVAIATNYFDLNSKLGQGGFGPVYKGKLLNGQEIAVKRLSRASKQGYEEFINEVRVISKLQHRNLVRLLGCCIEGEEKMLIYEYMPNLSLDAWIFGSSKPKILDWRKRFNIIDGIARGLLYLHRDSRLKIIHRDLKVSNILLDKDLNSKISDFGMARIFGGDEVQANTVRVVGTYGYMSPEYAMQGQFSEKSDVFSFGVLLLEIISGRRNTGFYVHESSISLLGFAWKLWTEDNLIPLIEPTIYEPCYQLEISRCIHVGLLCVQEFINERPNVSTIISMLNSEIVDLPSPKEPGFVGRPHETNTESSKKKVDQFSTNNVTLTAVIAR* 1663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 15140058 15147010 - Chy12G215860.1 Chy12g00986 238767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00986 1662 SMART serkin_6 1344 1602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g00986 1662 SMART serkin_6 520 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g00986 1662 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 15 825 - -
Chy12g00986 1662 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 837 1644 - -
Chy12g00986 1662 Pfam Protein tyrosine and serine/threonine kinase 1346 1613 IPR001245 GO:0004672|GO:0006468
Chy12g00986 1662 Pfam Protein tyrosine and serine/threonine kinase 522 722 IPR001245 GO:0004672|GO:0006468
Chy12g00986 1662 CDD PAN_AP_plant 1164 1252 - -
Chy12g00986 1662 ProSiteProfiles Protein kinase domain profile. 1344 1620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g00986 1662 SUPERFAMILY Protein kinase-like (PK-like) 502 823 IPR011009 -
Chy12g00986 1662 Pfam PAN-like domain 357 416 IPR003609 -
Chy12g00986 1662 Pfam PAN-like domain 1179 1237 IPR003609 -
Chy12g00986 1662 CDD PAN_AP_plant 342 431 - -
Chy12g00986 1662 ProSiteProfiles PAN/Apple domain profile. 346 431 IPR003609 -
Chy12g00986 1662 CDD B_lectin 859 980 IPR001480 -
Chy12g00986 1662 CDD B_lectin 46 157 IPR001480 -
Chy12g00986 1662 Pfam S-locus glycoprotein domain 217 324 IPR000858 GO:0048544
Chy12g00986 1662 Pfam S-locus glycoprotein domain 1038 1146 IPR000858 GO:0048544
Chy12g00986 1662 SMART ntp_6 1178 1251 IPR003609 -
Chy12g00986 1662 SMART ntp_6 356 430 IPR003609 -
Chy12g00986 1662 ProSiteProfiles Bulb-type lectin domain profile. 853 977 IPR001480 -
Chy12g00986 1662 SMART blect_4 39 157 IPR001480 -
Chy12g00986 1662 SMART blect_4 859 980 IPR001480 -
Chy12g00986 1662 ProSiteProfiles Bulb-type lectin domain profile. 33 154 IPR001480 -
Chy12g00986 1662 SUPERFAMILY alpha-D-mannose-specific plant lectins 901 1045 IPR036426 -
Chy12g00986 1662 Gene3D Phosphorylase Kinase; domain 1 1320 1419 - -
Chy12g00986 1662 Gene3D Phosphorylase Kinase; domain 1 496 595 - -
Chy12g00986 1662 Gene3D - 28 154 IPR036426 -
Chy12g00986 1662 Gene3D - 849 977 IPR036426 -
Chy12g00986 1662 SUPERFAMILY Protein kinase-like (PK-like) 1328 1615 IPR011009 -
Chy12g00986 1662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Chy12g00986 1662 PANTHER - 15 825 - -
Chy12g00986 1662 PANTHER - 837 1644 - -
Chy12g00986 1662 Gene3D Transferase(Phosphotransferase) domain 1 596 797 - -
Chy12g00986 1662 Gene3D Transferase(Phosphotransferase) domain 1 1420 1622 - -
Chy12g00986 1662 Pfam D-mannose binding lectin 901 1005 IPR001480 -
Chy12g00986 1662 Pfam D-mannose binding lectin 81 183 IPR001480 -
Chy12g00986 1662 ProSiteProfiles PAN/Apple domain profile. 1168 1252 IPR003609 -
Chy12g00986 1662 CDD STKc_IRAK 1350 1616 - -
Chy12g00986 1662 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 224 IPR036426 -
Chy12g00986 1662 CDD STKc_IRAK 526 792 - -
Chy12g00986 1662 Pfam Domain of unknown function (DUF3403) 1617 1662 IPR021820 GO:0004674
Chy12g00986 1662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1465 1477 IPR008271 GO:0004672|GO:0006468
Chy12g00986 1662 ProSiteProfiles Protein kinase domain profile. 520 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00387 Chy-Chr1:2771423 Chy12g00986 Chy-Chr12:15140058 2.45E-82 dispersed
Chy02g00355 Chy-Chr2:2288731 Chy12g00986 Chy-Chr12:15140058 1.24E-89 dispersed
Chy12g00986 Chy-Chr12:15140058 Chy12g01001 Chy-Chr12:15238960 0 dispersed
Chy12g00985 Chy-Chr12:15128749 Chy12g00986 Chy-Chr12:15140058 4.08E-23 tandem
Chy12g00986 Chy-Chr12:15140058 Chy12g00987 Chy-Chr12:15147800 4.80E-143 tandem
Chy02g02273 Chy-Chr2:26804902 Chy12g00986 Chy-Chr12:15140058 2.29E-56 transposed
Chy02g02274 Chy-Chr2:26810457 Chy12g00986 Chy-Chr12:15140058 1.39E-09 transposed
Chy10g00025 Chy-Chr10:862898 Chy12g00986 Chy-Chr12:15140058 4.09E-36 transposed
Chy01g00394 Chy-Chr1:2800963 Chy12g00986 Chy-Chr12:15140058 3.58E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71621 PF07714 PK_Tyr_Ser-Thr 6.40E-46 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00986 - - bhj:120084137 2109.72