Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy12g00991 ATGAAAAATCTTCTTTCCTTGCTTTTCTTCACACTTGTACCTCTGTTTTCCCAAAAATCCATTGCAGACGATAGTATAAAACAACACCAATCCATTAATGACACCCAATTAATTGTTTCAGCCGCCCAAACTTTTGAATTGGGATTCTTCAATGAACCTAAAGCCTCTAATTTAAGGTATTTAGGAATATGGTACAAGGGCATTCCAGATGTTGTCGTTTGGGTCGCAAACAGAGACAACCCAATTCTAAACTCCAATACTACTTTAATTTTCAATGGAGATGGAAACTTGGTTCTCATCAATCAAACAGGTTTCCGTTTTTGGTCTTCAAACTCAACAAGCTCGATCCAAAATCCCATCGCTCAACTCCTGGATACTGGAAATTTGGTGTTGAGAGATTTAAATTCCGGATCAGAAAATTACGAGTGGCAGAGCTTTGATTATCCTTCTGATACTCTGTTACCGGGAATGAAACTCGGGTGGGATTCTAAAACAGGGCTTAACCGAAAATTAACATCTTGGAGAAGTCCAAATAATCCAACCTCAGGAGAATTCAGTCTTAGCATCAACACAAATGGGCTTCCTCAATTCTTGGTTAGTAAAAGAAACAAGACGATGTACAGAGGCTGGCCTTGGTATGATCATGATTTTGGACAGGGTTACGGTAATGGGTTTGATTACAATCTCGTTTTTAATACTTCCATGGAGATATCATTTTCATATAACTATTCAGCTCGTACAAGAATTGTGATGGATTCAAGCGGGTTCGTCAATCGGTACGTGTGGAGCGATGTAGAAGAAGGATGGCGCAATGAATTCACGTTTAATGGAGCTGGTTGTAACGACTATGACTTGTGTGGAGATTTTGGTATCTGTGACGCTGTAGTAACAGCAAGTTGTGGTTGTTTAGATGGTTTTAAACCAATCTCAACCCAAAATTTCTCAAATGGGTGCGTTAGAAAGGATCAAGATATTTGCAAAGTTGGAGATGGGTTTAAAAGGATAAGTAATGTGAAATGGCCTGATTCAACGGGGGAGTTAGTGAAGATGAAACTGGGTGTTCAAGACTGTGCAGGAGAATGCTTGAACAATTGCTCTTGTTTAGCATATGGAACAGTGGGAATTCCTAAAATTGGGAGTGTCTGTGTCAATTGGTTTCACAAATTGATTGATGTTAGATATGTTCGTGATGTTGGGTCTGGAGACGATCTCTTCGTCAGAGTTGCGGCTTCAGAATTAAAATCGGTCCAATCGGATGATGGAAAGCGTAATGCTGAATCCGATGATGAAAAGCATAATGTCGCTGTGGTTGTGGCTGTGCCGATCGTTTCAGTGACAATCTTTTTGGCTTTATTAGTTGGGGGCTGCTTTCTTATTAAGAGAAGAGCTAACGGAAATGATGGAGTTGTTATAGTAATCGAGCCTCCAATACAAGAAAATAAACTTGAGATGCCTATTGGTGTTGTTGAAGCTGCTACGGAAAATTTTTCAATTTCTAACAAGATAGGAGAGGGTGGTTTTGGAGCTGTTTATATGGGAAGGCTTCCAAGTGGGCAAGAAATTGCAGTAAAAAAACTAGCTGAAAGATCAGGTCAAGGGCTGCAAGAATTCAAAAATGAAGTAATTTTTATTTCTCAACTTCAACATCGAAATCTTGTGAAGCTTCTTGGTTATTGCATCCACCAGGAAGAAATATTACTAATCTATGAGTACTTGCCAAACAAAAGTTTGGACTGCTTCCTTTTTGATGATCAAAAGCGTTCTATACTTAACTGGCCGAAGAGAATTGATATCATAATGGGCATAGCTCGAGGACTTCTATATCTTCATCAAGATTCGAGACTTAGAATAATACATAGAGATCTTAAAGCAGCCAATATTCTCTTGGATAGTGAAATGAAACCGAAAATTTCAGACTTTGGCATGGCACGCATGTTTGGTGAAGATCAAACAGAAACAAAAACAAGAAGGGTTGTTGGAACTTATGGATATATGCCTCCAGAATATGCAATAGACGGCTTATTTTCAGTAAAGTCTGATGTTTTCAGCTTTGGAGTCATGGTTTTAGAGATAGTCAGTGGCAAGAAGAACAAAGGTTTTTTTCATCCAGAGCATCGACTAAATCTTCTTGGACATGCATGGAAACTTTGGAATGAAGGAAGGGCATTGGAGTTCATCGATATAATGTTGGAGGATGAATGGGATAAACATGAAGCTTTAAGATATATAAATATCGGATTGCTATGTGTTCAAAGTCGTTCAGAAGAAAGACCAACTATGTCAACTGTGTTTTCAATGTTAGAGAATGAAAAAATGCAACTAATACTTCCTCAACGACCTGGATTCTATGAGGAAAGGTTCATAGTATCTGATATTCATTCATCATCTAGTGATCACCATGCATCCTCGATCAATAATGTTACCGCTTAA 2430 38.52 MKNLLSLLFFTLVPLFSQKSIADDSIKQHQSINDTQLIVSAAQTFELGFFNEPKASNLRYLGIWYKGIPDVVVWVANRDNPILNSNTTLIFNGDGNLVLINQTGFRFWSSNSTSSIQNPIAQLLDTGNLVLRDLNSGSENYEWQSFDYPSDTLLPGMKLGWDSKTGLNRKLTSWRSPNNPTSGEFSLSINTNGLPQFLVSKRNKTMYRGWPWYDHDFGQGYGNGFDYNLVFNTSMEISFSYNYSARTRIVMDSSGFVNRYVWSDVEEGWRNEFTFNGAGCNDYDLCGDFGICDAVVTASCGCLDGFKPISTQNFSNGCVRKDQDICKVGDGFKRISNVKWPDSTGELVKMKLGVQDCAGECLNNCSCLAYGTVGIPKIGSVCVNWFHKLIDVRYVRDVGSGDDLFVRVAASELKSVQSDDGKRNAESDDEKHNVAVVVAVPIVSVTIFLALLVGGCFLIKRRANGNDGVVIVIEPPIQENKLEMPIGVVEAATENFSISNKIGEGGFGAVYMGRLPSGQEIAVKKLAERSGQGLQEFKNEVIFISQLQHRNLVKLLGYCIHQEEILLIYEYLPNKSLDCFLFDDQKRSILNWPKRIDIIMGIARGLLYLHQDSRLRIIHRDLKAANILLDSEMKPKISDFGMARMFGEDQTETKTRRVVGTYGYMPPEYAIDGLFSVKSDVFSFGVMVLEIVSGKKNKGFFHPEHRLNLLGHAWKLWNEGRALEFIDIMLEDEWDKHEALRYINIGLLCVQSRSEERPTMSTVFSMLENEKMQLILPQRPGFYEERFIVSDIHSSSSDHHASSINNVTA* 810
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 15168150 15178757 + Chy12G215910.1 Chy12g00991 238772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy12g00991 809 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 15 799 - -
Chy12g00991 809 Pfam S-locus glycoprotein domain 225 308 IPR000858 GO:0048544
Chy12g00991 809 SUPERFAMILY Protein kinase-like (PK-like) 484 797 IPR011009 -
Chy12g00991 809 ProSiteProfiles Protein kinase domain profile. 496 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g00991 809 CDD STKc_IRAK 502 769 - -
Chy12g00991 809 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Chy12g00991 809 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Chy12g00991 809 Gene3D - 17 146 IPR036426 -
Chy12g00991 809 PIRSF SRK 1 809 IPR024171 GO:0004674
Chy12g00991 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 180 IPR036426 -
Chy12g00991 809 Gene3D Phosphorylase Kinase; domain 1 466 571 - -
Chy12g00991 809 Pfam D-mannose binding lectin 72 175 IPR001480 -
Chy12g00991 809 SMART serkin_6 496 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy12g00991 809 SMART ntp_6 327 408 IPR003609 -
Chy12g00991 809 CDD PAN_AP_plant 327 409 - -
Chy12g00991 809 Gene3D Transferase(Phosphotransferase) domain 1 572 777 - -
Chy12g00991 809 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 799 - -
Chy12g00991 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Chy12g00991 809 CDD B_lectin 30 149 IPR001480 -
Chy12g00991 809 SMART blect_4 29 149 IPR001480 -
Chy12g00991 809 Pfam Protein tyrosine and serine/threonine kinase 498 766 IPR001245 GO:0004672|GO:0006468
Chy12g00991 809 ProSiteProfiles PAN/Apple domain profile. 326 409 IPR003609 -
Chy12g00991 809 Pfam PAN-like domain 326 392 IPR003609 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy12g00991 Chy-Chr12:15168150 Chy12g00999 Chy-Chr12:15218140 0 dispersed
Chy12g00990 Chy-Chr12:15163041 Chy12g00991 Chy-Chr12:15168150 0 tandem
Chy12g00991 Chy-Chr12:15168150 Chy12g00992 Chy-Chr12:15178801 7.56E-95 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71623 PF07714 PK_Tyr_Ser-Thr 8.00E-49 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy12g00991 - - csv:101215224 1590.86